Pectobacterium odoriferum: BCS7_03485
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Entry
BCS7_03485 CDS
T03424
Name
(GenBank) ligand-gated channel
KO
K02014
iron complex outermembrane recepter protein
Organism
pcv
Pectobacterium odoriferum
Brite
KEGG Orthology (KO) [BR:
pcv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcv02000
]
BCS7_03485
Transporters [BR:
pcv02000
]
Other transporters
Pores ion channels [TC:
1
]
BCS7_03485
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
STN
Motif
Other DBs
NCBI-ProteinID:
AIU87355
LinkDB
All DBs
Position
786999..789368
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AA seq
789 aa
AA seq
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MVKFRTHLLARTLRAGVLGASFASVLPMAAVYAASAASVQQYTISSGPLNQVLNQFAQQA
GVLLSYDPAVVAGKRGAGLQGNYSVEQGFQQILSNSGLSAQYSADGSVTLVLRTVSEPVP
VSAPVVAKNDRIVVTAPPNTAMKLAVPISETPRAVSVVTEKQIEERGAQKIDQALRYSSG
ILATPYGPDNKAEWVTIRGFSDQSRFQNGLATLNEDGFYGQQIEPFGVERIEVLKGPASV
LYGQNPPGGLVNVITKRPTRLPQGKVELEYGSNDYRHLAVDSAGPLNDDGSVLYRVVALA
RDTSGEMDFSKSKRLYLAPSVTFLGEDTELTVLASYMETKSDTTNGFKLPYGTLHGTPFG
KVGYKTSLGEPGMNRHDTRQFSLGYEFTHHLNDTWTFHQNVNYTYLNLDLRNAYAIAMVD
ERHASRGLTYRDGFAQNWATDNRLVGEWQWEDIENTLLLGFDYRRANTQSRDGNLYAFGS
PIDIFNPVYGNYTLSDSDLFAHRSGRHQTGYYVQNQIKYDERLIFLLGGRYDVAKSRDRN
FSSGADTRTDDTKFTKTAGVMYLFDNGISPYVSYSESFLPVSGRDGYERPYVPEEGQQME
VGVKYTPEGFNGYASAALFNLEQKNVKTTDPKNPSLTIQAGEARSRGLELELSGEVYTGL
TLTANYTYNEVETTKSGTVGEVGKRLPGLPEHIVSGWASYAFNGKLEGLSIGSGVRYVGS
SYGDIANSADMKVPAYTLWDAMIAYDFSKDWRLQVNATNLTNREYVSACNYWCYYGEGRN
VSANVSYRW
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atggttaaattccgtacccacctgttggcacgtactttacgtgctggggtacttggggca
tcgtttgcctcagtgctgccaatggcggcggtctatgctgcatctgcggcgtctgtccag
caatacacgatatcgtctggcccgctcaatcaggtactcaatcaatttgcccaacaggct
ggcgtattactgtcttacgatccggctgtcgtggcgggtaagcgcggggcggggttgcag
gggaattacagcgttgagcagggtttccagcagatcctcagcaacagcggcctaagcgca
cagtacagtgccgatggcagcgtgacgctggtgctgcgtacggtgagtgagccagtccct
gtttctgcgcctgttgtcgctaaaaacgatcggatcgtcgtcaccgctccaccgaatacc
gcaatgaagctggctgtgccgatttcagagacgccacgtgcggtttcggttgtgacagag
aaacagatcgaagagcgcggtgcacaaaagatcgatcaggcgctgcgctatagcagcggt
attctggcgacgccatacgggccggacaataaagccgaatgggtaactattcgtggattt
agcgatcagtcccgattccagaatggtctggctacgctgaacgaagatggattctacggc
cagcagattgagccgttcggcgtcgagcgtatcgaagtcctgaaaggcccagcctccgtt
ctgtatgggcaaaacccgccgggcggtctggttaacgtcatcaccaaacgaccaacacgt
ttgccgcaggggaaagtcgagctggaatacggctctaacgattatcgccatctggctgtc
gacagtgcgggtccgttaaacgatgacggttcagtgctgtatcgggttgttgcgctggcg
cgtgatacttcgggtgagatggacttctcgaagagcaagcgcctttatctggcaccgagc
gtcacgttcctcggagaagatacggaactgaccgtgttagccagctacatggagacgaaa
tccgacacgaccaacggctttaagctgccgtacggtacattacatggcacgccgtttggc
aaagtcggctataaaacgtcgctgggcgaaccgggaatgaaccgccacgatacccggcag
ttcagcctgggctatgagttcacgcatcatctgaacgacacctggacgttccaccagaat
gtgaattacacctatctgaatttggatctgcgcaatgcttatgcgattgcgatggtggat
gaacgccacgccagtcgtgggctgacctaccgcgatggttttgcgcaaaactgggccacg
gacaaccgtttagtgggtgaatggcagtgggaagatattgaaaacacgctattgctcggg
ttcgactaccgccgtgccaatacacaaagccgcgatggaaatctgtacgcctttggcagt
cctatcgacatctttaatccggtttatggtaattacacattatcagatagcgacctgttc
gctcaccgctctggccgccatcagactggctactatgttcagaaccagattaagtatgac
gagcgtctgatcttcttgctgggtggacgttacgacgtggcgaagtctcgcgatcgtaat
ttctcatcaggcgcggatactcgcaccgacgataccaaatttaccaagactgctggggta
atgtacctgtttgataatggtatttccccttacgtcagctattcggaatcgttcctgcct
gtgtcgggtcgcgatggttatgaacgtccttatgtgccagaagaaggccagcagatggaa
gttggcgtgaaatatacgccggaaggctttaacggttatgcctctgctgccctgtttaat
ctggaacagaaaaacgtcaaaacgacggatcctaaaaacccgagtctaactattcaggca
ggtgaggcccgttcacgcggcctagagctggaattgagcggtgaggtttataccggtctg
acgctgacggcaaactacacatacaacgaagtggagaccactaaatcaggtaccgtcggt
gaagtgggtaaacgcctaccgggcctgcctgaacatattgtgtctggctgggctagctat
gcctttaacggcaagctggaaggattaagtatcggcagcggtgtgcgctatgtgggcagc
tcctacggtgacattgccaattcagcggacatgaaggttcctgcttatacactgtgggat
gcgatgatcgcctatgatttcagcaaagactggcggttgcaggttaatgcaacgaacctg
accaaccgtgagtatgtcagcgcctgtaactactggtgctactacggtgaaggccgtaac
gttagcgcgaacgtcagctatcgctggtaa
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