Pectobacterium odoriferum: BCS7_04820
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Entry
BCS7_04820 CDS
T03424
Symbol
recC
Name
(GenBank) exonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
pcv
Pectobacterium odoriferum
Pathway
pcv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BCS7_04820 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcv03400
]
BCS7_04820 (recC)
Enzymes [BR:
pcv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
BCS7_04820 (recC)
DNA repair and recombination proteins [BR:
pcv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BCS7_04820 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AIU87566
UniProt:
A0ABD6VSC8
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All DBs
Position
1094671..1098069
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AA seq
1132 aa
AA seq
DB search
MFRIYHSNQLDILKRLMVELIKRQPLADPFQQEVILVQSPGMAQWLQIELAGHFGIAANI
QFPLPGVFLWNMCRHVLPDIPKESAFSKDAMTWKLMHLLPDLLAQPDFAALNHYLQDDDN
QRKLHQLAGRVADLFDQYLIYRPEWIKAWQEGKQVDDLGGNQLWQSALWRALVDYTRELA
QPEWHHAILYQRFINALEQAKSCPKGLPPRVFICGISALPPIYLQALNALAQHIDVHLLF
TNPCRHYWSDIQDYKFLAKLKARHRRLHRFGGEQTDETRALFRDPSLAETLFNDDGKQSV
NNPLLASWGKLGRDNLYLLAELDSVQEIDAFVESDGENLLQTLQRDILELEDHAVVAVSH
DTQNTSMQKRLLAFDDRSIDFHACHSPQREVEVLHDRLLAMMADDPELMPRDVIVMMADI
DSYTPFIQAVFGNAPDNRYLPFAISDQRARHAHPALQAVISLLDLPTSRFTAEQVLALLE
VPALAARFGIQEEGLRRLRLWVVESGVRWGLDDDNVRDLMLPPTGQHTWRFGLTRMLLGY
AMDSQVGDWQGVLPYDESSGLIAELAGQLAELLMQIHHWRQRLSQPRVLVDWLPLCRELI
ETFFDADSETEAALALVEKQWQYVIGMGTMAHYPQQVPISRLRDELSRRLDQERLSQRFL
AGSINFCTLMPMRSIPFKVVCLLGMNDGVYPRTLPPLGFDLMGRKIKRGDRSRRDDDRYL
FLEALLSAQHKLYISYIGRSIQDNTRRYPSVLVSELTEYIAQSYVLPGDEALDIDSSAER
VVKHLCREHSRMPFDANNFLSAPQPLSFAAEWLAAANQKGEAQPDFDREALSERASDRDV
SLDDLKRFYRHPVRAFFQLRLGVSFMLHSDELLDEEPFVVDSLNRYQLNSELLNTLIHEG
DTEKLYRRARAAGELPYGAFGEIYWQEQQQEMAQLAARVRDELTPSLSVSREVDILLDGV
RVSGWLNQVQPDGLLRWRPGTLSMKDGITLWLEHLAYCATGGQGESRLYGREDTAWRFAA
LSEVQAREHLAVMLDGYRQGMSKPLLLLNKAGSAWLAECYDRESDSLRVDEDPQNKARTR
LLQAWQGNMGMRGEGEDYYLQRIIRELDEKRMNEVIEAAKIWLLPPFRFNLA
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atgtttagaatctatcactccaatcagttggatatcttgaaaagactgatggttgagctg
ataaaacgtcagccgcttgcagatcccttccagcaagaagtgattttggtgcaaagcccg
gggatggcacagtggctgcaaattgaactggctggacatttcggcattgctgccaatatt
caattcccgctgcccggtgtttttttgtggaatatgtgtcgccatgtgctgccagatatt
ccaaaagaaagcgctttcagcaaggatgcgatgacgtggaagctcatgcatttgctgccc
gatttgttggcacagcctgattttgcggcccttaaccactatttgcaggatgacgataac
cagcgcaagctgcatcagcttgccggacgcgtagcggatcttttcgatcaatatctgatt
tatcgtcctgagtggatcaaggcatggcaagaagggaaacaggttgacgatctcggtggc
aaccagctgtggcaatcggcgctgtggcgtgcgttggttgactacactcgtgaactggcg
cagcccgaatggcaccatgcgattctgtatcagcgctttatcaatgcgctagagcaggca
aaatcgtgcccgaaaggcttgccgccacgcgtttttatctgcggcatttcggcgttaccc
cctatctatttacaggcgttgaatgcgctggcgcagcatattgatgtgcatctgctattt
accaatccctgtcgccattactggagtgacattcaggattataaatttctggcgaagcta
aaagcccgccaccgtcgcctacatcgctttggcggcgagcagactgatgaaacccgcgcg
ttatttcgcgatccctcactggcagaaacgttgttcaacgacgatggtaaacagtcggtt
aataatccgctgctggcatcgtggggaaagctggggcgcgataacctttatctgctggct
gagttggatagcgtgcaggaaatcgacgcctttgttgagtcggatggtgaaaatctgctg
caaaccttgcagcgcgatattcttgagctggaagatcacgcggtggtggccgtcagccac
gacacgcagaacaccagcatgcaaaaacgcctgctggcattcgacgatcgttcgattgat
tttcacgcctgccatagcccgcagcgtgaggttgaagtgcttcacgatcggctgctggcc
atgatggccgacgatcctgagctgatgccgcgcgacgtcattgtgatgatggcggatatc
gatagctatacgccgtttattcaggcggtgttcggtaatgcgccggataaccgctatctg
ccttttgccatctccgatcagcgtgcgcgacatgcgcatcccgcattgcaggcagtaatc
agcctgctggatttaccgacgagccgttttacggcagaacaggttctggcgttgcttgaa
gtgcccgcgctggctgcacgttttggtattcaggaagaagggctacggcgtctgcgcctg
tgggttgtggaatcaggcgtgcgctggggattggatgacgacaacgtgcgcgatctgatg
ctgccgccgacggggcaacatacgtggcgtttcggtctcacgagaatgctgctgggctat
gccatggatagccaggtcggcgactggcagggcgtactgccttacgatgaatccagcggc
ctgattgccgaactggccggtcaactggctgaactgctgatgcagatccaccattggcgt
cagcgtctgtcccagccacgtgtgcttgttgactggttaccgctgtgtcgagagctgatc
gaaaccttctttgatgctgacagcgagaccgaagcggcgctggcattggtggaaaaacaa
tggcagtacgtgattggtatgggcacgatggcgcattatccgcaacaagtgccgatctcc
cggttacgtgatgaactgtcgcggcgtctcgatcaggagcgactcagccagcgttttctg
gctggttcgatcaacttttgtacgctgatgcccatgcgttccatcccgttcaaggtcgtg
tgtttattgggtatgaatgacggcgtctacccccgaacgctgccgccactcgggttcgat
ctgatggggcggaaaatcaagcgcggcgatcgtagccgacgtgacgatgaccgctatctg
tttcttgaggcgctcctgtcggcgcagcacaaactctatatcagctatatcgggcgctcg
atccaggataatacgcgtcgctatccttccgtattggtcagcgaactgacggagtatatt
gcacaaagttacgtcctgccgggtgatgaagcgttggatatcgatagcagtgcggagcgc
gtggtgaagcacctttgccgcgaacatagccggatgccttttgatgcgaataacttcctg
tctgcaccgcagccgttgagctttgcagcagagtggctggcggcggcgaaccaaaaaggg
gaggctcagcctgatttcgatcgtgaagcattgtccgaaagagcgagtgacagggatgtt
agtctggacgatctgaagcgtttttatcgtcatcctgtgcgagccttttttcaactgcga
cttggcgtgagttttatgctacacagcgatgagctgttggatgaagagccctttgtggtt
gatagccttaaccgctatcagttgaatagcgagttgcttaataccttgattcatgaaggc
gatacggaaaaactgtatcgccgtgccagagccgcgggtgaactgccctatggcgcattc
ggcgaaatttactggcaggaacagcagcaggagatggcgcagttggctgcgcgtgtacgc
gatgaattaacgccttcgctgtcggtgagtcgggaagtggatatcctccttgacggcgtg
cgcgtcagtggttggctgaatcaggtgcagccggatggtttgctgcgctggcgtccgggc
acactttctatgaaggatggcattacgctgtggttggaacatctggcctactgcgcaacg
ggcggacagggtgaaagccgactgtatgggcgggaagacacggcgtggcgctttgctgcc
ttgtcggaagtgcaggccagagaacatctggctgtcatgctggatggatatcgtcaggga
atgagcaagccgctgttattgctaaataaagcagggagcgcctggctggctgaatgttat
gatcgtgaaagcgacagcctgcgggtggatgaggacccgcagaacaaagcgcgcactcgg
ttactgcaagcctggcaaggcaacatgggaatgcggggtgaaggtgaggattattacctg
caacgcattattcgtgagttggatgaaaagcgaatgaatgaggtgattgaagcggcgaaa
atctggctactgccaccgttccgctttaatctggcttga
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integrated database retrieval system
