Pectobacterium odoriferum: BCS7_08280
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Entry
BCS7_08280 CDS
T03424
Name
(GenBank) endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
pcv
Pectobacterium odoriferum
Pathway
pcv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pcv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BCS7_08280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcv03400
]
BCS7_08280
Enzymes [BR:
pcv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
BCS7_08280
DNA repair and recombination proteins [BR:
pcv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
BCS7_08280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
AIU88127
LinkDB
All DBs
Position
complement(1884798..1885643)
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AA seq
281 aa
AA seq
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MKYIGAHVSASGGVDQAVIRAHEIQATAFALFTKNQRQWQAAPLSTEVIDRFKAACEQYA
YTPAQILPHDSYLINLGHPDAEALEKSRSAFIDEMSRCQQLGLSLLNFHPGSHLKQIEEA
DCLARIAESINIALAETDGVTAVIENTAGQGSNLGFRFEHLAAIIDGVEDKSRVGVCIDT
CHAFAGGYDLRTEADCEATFSEFDRIVGFRYLRGMHLNDAKSAFASRVDRHHSLGEGNIG
KTVFSYIMKDARFDGIPMILETINPDIWADEIAWLKSEAQR
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgaaatacatcggggcgcacgttagcgcatctggcggggtcgatcaggccgtcattcgt
gcacatgagatacaagcgacggctttcgctttatttaccaagaatcagcgccaatggcag
gccgcgccgctcagcacagaggtcatcgatcgttttaaagccgcctgtgaacagtacgcc
tatacgccagcacagattctgccgcacgatagctatctgattaatctgggtcacccagac
gccgaggcactggagaagtcacgcagcgcgtttattgatgaaatgtcgcgctgccagcag
cttgggctaagcctgctgaattttcaccccggcagccatctaaagcaaatcgaggaagcg
gactgtctggcacgtatcgccgagtctatcaacatcgcgctggcggaaacggatggcgtc
accgccgtgattgagaataccgctgggcaaggcagtaatttggggttccgctttgagcat
ctggcggccatcatcgatggtgttgaggataaaagccgcgtcggcgtctgtatcgatacc
tgccacgccttcgccggtggctacgacctgcggacagaagccgattgcgaagccaccttc
tctgaattcgatcgcattgttggttttcgctatctgcgcggaatgcatttgaatgatgcc
aaaagcgcgttcgccagtcgcgttgaccgacaccatagcctaggggaaggcaatatcggc
aaaaccgttttcagctatatcatgaaagatgcccgctttgatggtatcccgatgattctg
gaaacgatcaaccccgatatctgggccgacgaaatcgcctggctcaaatccgaagcgcag
cgctaa
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