Pectobacterium odoriferum: BCS7_08570
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Entry
BCS7_08570 CDS
T03424
Name
(GenBank) DNA-binding protein
KO
K00375
GntR family transcriptional regulator / MocR family aminotransferase
Organism
pcv
Pectobacterium odoriferum
Brite
KEGG Orthology (KO) [BR:
pcv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcv03000
]
BCS7_08570
Transcription factors [BR:
pcv03000
]
Prokaryotic type
Helix-turn-helix
GntR family
BCS7_08570
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
GntR
HTH_41
HTH_36
HTH_50
Motif
Other DBs
NCBI-ProteinID:
AIU88180
LinkDB
All DBs
Position
complement(1948870..1950315)
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AA seq
481 aa
AA seq
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MKPDSPLFFPLSFQESTPLYRQLYERVRRAISVGLLSPGNRLPSARMLAKELGVARGTIE
QAYSLLVAEGYLQARGQAGTLVNPDLPLAPTSVTDATISPSAPDDEQNILWRPSQLLPFQ
MGVPAFDAFPRKLWARLGARYLRSMQLPDWDYPAPYGLPALRNAIASYLQVARGIDCTAN
QVFITSGWRANLQLAALALLKSGQRVWVEDPGYPPTRQLLSQSDLCPVPVTVDREGLNVE
RGITLANDASMAVVTPAHQSPLSMSLSLPRRQALLQWATEQNAWIVEDDYDGEYRYVSRP
LPALASLDRNGRVLYAGTFSKVLFPGIRLAYLVVPQAQIATFEHISRIFFASASPTITQS
IVASFIAEGHFARHIQRTRRLYAERRTATIAALKGILGNRIHIDSQPGGMHLVLRLPDSI
SDRQLADRLLAQGIAVQPLSRWAVSGNGDNALLVSFTNCATMAEPERLATLILAGLEQHG
S
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgaagcctgactctcccctatttttccccctttcctttcaggagagtacaccgctctat
cgccagctttacgagcgggtgcgtcgggctatcagcgtaggcctattgtctccaggtaac
cgtctaccttccgcacgtatgcttgcgaaagagctcggcgtcgcacgcggaacaatagaa
caggcctactcgttgctggttgccgaaggttatcttcaggcacgcgggcaagcaggaacg
cttgtgaatcccgatttacccttagcgccaacatccgttaccgatgcgactatatccccc
tcagcaccagacgatgaacagaacatactgtggcgtccatcgcagctgttgccctttcaa
atgggggttcccgcttttgatgcctttccgcgcaaactctgggctcgactgggcgcacgc
tatcttcgcagcatgcaattaccggattgggattaccctgcaccttatggcttgccagcg
ctaagaaacgctatcgcctcttatctgcaagtggctcgtggcattgactgtactgcaaat
caggtattcatcacctcaggttggcgcgccaatttgcaactcgcagcgctagccttgctg
aaatccgggcagcgcgtctgggttgaagatcctggctatcccccaactcgccagttgcta
tcgcaatctgacttatgtccggttccggtaaccgtcgatcgtgaaggacttaacgtggag
cgcggcatcacgctggcgaatgacgccagtatggccgttgtcactcccgcacatcaaagt
cctctgtcgatgtcgttatcgctccctcggcgacaggcattattgcagtgggcaaccgag
cagaacgcctggatagtggaggatgattatgatggggaatatcgttacgtcagtcgccca
ctcccagcgctcgccagtctggatcgcaatgggcgggttctgtatgcgggcaccttcagc
aaggtgttattcccggggattcggttggcttatttggttgtcccgcaggcacagattgcc
acctttgaacacatcagccgaattttcttcgcttccgcatcgccaacgataacgcaatct
atcgttgccagcttcatcgctgaaggccattttgcccggcacattcagcgcacgcgacgc
ctttatgcagaacgtcgcaccgccaccatcgctgcgctaaaaggtattttggggaaccgt
atacacatcgattcgcagcccggcgggatgcacttagtgttacgcctgccggatagcatt
agcgatcggcagcttgccgaccgcctgctagctcagggcatcgccgttcaaccgctatca
cgctgggcagtatcaggaaatggtgataacgcgctactcgtcagtttcaccaactgcgcc
acgatggcagaaccggaacggcttgccacgttgattctcgccgggcttgaacagcacggg
agctaa
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