Pectobacterium odoriferum: BCS7_08910
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Entry
BCS7_08910 CDS
T03424
Name
(GenBank) murein L,D-transpeptidase
KO
K21470
L,D-transpeptidase YcbB
Organism
pcv
Pectobacterium odoriferum
Brite
KEGG Orthology (KO) [BR:
pcv00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pcv01002
]
BCS7_08910
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pcv01011
]
BCS7_08910
Peptidases and inhibitors [BR:
pcv01002
]
Cysteine peptidases
Family C82
BCS7_08910
Peptidoglycan biosynthesis and degradation proteins [BR:
pcv01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
BCS7_08910
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Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
RNase_3_N
Motif
Other DBs
NCBI-ProteinID:
AIU88242
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Position
2033317..2035053
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AA seq
578 aa
AA seq
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MLLHKRKMVRLLLRVGCIWVGSLSPSFSVLAASPMVISGLSQSSGVVSVENSRAGLLAAL
PHGITLHYLSDLSSLYAQHQMQPMWADNRAVQQFQQQLAELAIAGVQPQFTTWVTWLTDP
QLTGFARDAVLSDAMLGYLQFVSGVESRGNDWLYSSVPYRLQSPALNIVSQWQHAVKSGT
SAAYVVSLAPQHSQYTKMHDALKTMLTDNRPWPSLNLAESLRPEQQSRELAVLREILQRT
GMLSPTESITLFNENTAATTVSTGQSPLVDGSGTIDDRYTGELVDAVKRFQHWQGLEDDG
VIGKRTRDWLNVSPQMRATLLALNIQRLRLLPDNVHTGIMVNIPNYSLIYYQDGAERLSS
RVIVGQPKRKTPLMSSSLYNVVVNPPWNVPTTLTRQDIIPKVVRDPGYLQRHGYTVLSGW
SQDAEAIDPSMIDWQGVSAERFPYRLRQAPGANNSLGRYKFNMPNSEAIYLHDTPNHNLF
QRDIRALSSGCVRVNKASELASMLLQDAGWNNSRISSTLDQGNTTFVSMKHRIPVSLYYL
TAWVAEDGRPQFRTDIYNYDDTARAGTKVLSRAGLLLQ
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgttgttacataaacgaaaaatggtcaggctgctgttgcgcgtgggttgtatttgggtc
ggaagcctgtctccttcgttttcggtgctggcagcatctccgatggtgatatccggctta
tcgcaaagctcgggcgtggtgtctgtagaaaatagccgtgcagggcttttggctgcactg
ccgcacggtataacgttacattatctctctgatttatcatcgctttatgctcaacaccaa
atgcaacctatgtgggcagataatcgcgcggttcagcagtttcaacaacaactggccgaa
ttggcaatagcgggcgtacagccgcagttcaccacgtgggtgacctggctaaccgacccg
caattgaccggatttgcacgtgatgccgtgctatcggatgcgatgctgggttatttgcag
ttcgtctctggtgtcgaaagtcgcggtaacgattggctgtacagcagcgtgccttaccgt
ctgcaatcgccggcgctcaatatcgtttcgcaatggcaacatgccgtgaaatccggcacc
agtgcggcctatgtcgtttcgctggcaccgcagcattcgcaatataccaaaatgcatgat
gcattgaagacaatgctgacggacaatcgtccgtggccgagcttgaatctggcggaatct
ctgcgcccggaacagcagagtcgggaactggcggtactgcgtgaaattctgcaacgtact
ggcatgttgtcaccaacggaaagcattacgctgtttaacgaaaataccgctgcgacgaca
gtatcgacaggacagtctccgctggtcgatggcagcgggactatcgacgatcgttatact
ggcgaactggttgacgcggttaaacgcttccagcattggcaagggttggaggatgatggc
gttattggtaagcgtacgcgcgattggctcaatgtgtccccgcaaatgcgcgcaacgctg
ctggcgttgaatatccaacgtctgcgcctgttaccggacaatgttcacactggtatcatg
gtgaacatccccaattattcattgatctattatcaggatggcgcggagcgtttatcgtcg
cgcgtcattgttgggcagcccaagcgtaagacaccgttgatgagcagctcgctgtataac
gtcgtggtcaatccgccgtggaatgtcccgacgacgctgacgcgacaagacatcattcct
aaagtggtgcgtgaccccggttatctacaacgtcatggctacacggtgttgtccggttgg
agtcaggatgccgaagcgatcgatccttcgatgatcgattggcagggcgtgtcagcagag
cgtttcccataccgtctgcgccaggctcctggtgcgaacaactcgttgggacgctataag
ttcaatatgcctaattcggaagcgatttatctgcacgacacgcctaatcacaatctgttc
cagcgtgatatccgggcgctgagctctggctgcgtgcgggttaataaggcatcggaactg
gctagcatgctattgcaggatgcgggatggaataatagtcgtatttcttccacgctggat
caggggaataccacctttgtgtcaatgaaacatcggattccggtcagcctctattatctg
accgcgtgggtggctgaggatggtagaccacagttccgaacagatatttacaattatgat
gacactgcgcgtgctgggacgaaagtgctctccagagcagggttgttgcttcagtaa
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