Pectobacterium odoriferum: BCS7_09170
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Entry
BCS7_09170 CDS
T03424
Name
(GenBank) transcriptional regulator
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
pcv
Pectobacterium odoriferum
Brite
KEGG Orthology (KO) [BR:
pcv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcv03000
]
BCS7_09170
Transcription factors [BR:
pcv03000
]
Prokaryotic type
Helix-turn-helix
Other families
BCS7_09170
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_6
SIS
SIS_2
MarR
HTH_24
HTH_Tnp_ISL3
Penicillinase_R
HTH_29
Nuc_deoxyri_tr2
HTH_Crp_2
TrmB
RWP-RK
Motif
Other DBs
NCBI-ProteinID:
AIU88288
LinkDB
All DBs
Position
complement(2095910..2096779)
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AA seq
289 aa
AA seq
DB search
MNMLEKIQSHLELLSKSERKVAEVILSTPQTAIHSSIATLAKMADVSEPTVNRFCRRLET
KGFPDFKLHLAQSLANGTPYVNRNVEEDDSVDAYTSKIFESAMAGLEQVKSSLDVTAVNR
AVDLLTQAKKISFFGLGASAAVAHDAMNKFFRFNIPVVYFDDIVMQRMSCMNSSDGDVVV
LISHTGRTKSLVEMAQLARENDATVIAITSDGTPLAREASLALRLDVPEDTDVYMPMVSR
IAQLTLIDVLATGFTLRRGEKFRDNLKRVKEALRESRFDKDERLINPFR
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgaatatgctggaaaaaatccagagtcacttagaactcttaagcaaatcagaaagaaaa
gttgctgaagtgatcctgagcactccgcagacggccattcactccagcatcgcaacctta
gccaaaatggccgatgtcagcgaaccaacggttaatcgtttctgtcgccgccttgaaact
aaaggttttcccgattttaaactacatctggcgcaaagtctggcaaacggtacaccgtat
gtgaaccgtaacgttgaagaagatgacagcgttgacgcctataccagtaaaatttttgaa
tccgcgatggctggcctggagcaggtgaaatccagtctggatgtcaccgccgttaaccgc
gccgtggatttgctgacgcaggcgaagaaaatctcgttctttggtctgggcgcttccgct
gcggtcgcacacgatgcgatgaacaaatttttccgcttcaatatccccgttgtctatttc
gatgacatcgttatgcagcgcatgagttgtatgaattccagcgacggcgacgtcgtggta
ttgatatcccacacaggcagaaccaaaagtctggtcgaaatggcgcaactggcacgcgaa
aacgacgcgaccgttatcgctattacctcagacggcacgccgctggcgcgtgaggcgtcg
ctggccttgcggctcgatgtgcctgaagataccgatgtttatatgccgatggtgtcccgc
atcgctcagttgacgctgatcgacgttctggcgacgggcttcacactacgccgcggggaa
aaatttcgtgataacctgaaacgggtcaaagaggccctgcgtgagtcacgctttgataaa
gacgagcgattgattaaccccttcaggtga
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