Pectobacterium odoriferum: BCS7_09745
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Entry
BCS7_09745 CDS
T03424
Name
(GenBank) oligogalacturonate lyase
KO
K01730
oligogalacturonide lyase [EC:
4.2.2.6
]
Organism
pcv
Pectobacterium odoriferum
Pathway
pcv00040
Pentose and glucuronate interconversions
pcv01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pcv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
BCS7_09745
Enzymes [BR:
pcv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.6 oligogalacturonide lyase
BCS7_09745
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase22
Tricorn_N
PD40
Motif
Other DBs
NCBI-ProteinID:
AIU88388
UniProt:
A0ABD6VVF1
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All DBs
Position
2203181..2204347
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AA seq
388 aa
AA seq
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MAKGNKIPLTFHTYQDSATGTEVVRLTPPDVICHRNYFYQKCFFNDGSKLLFGAAFDGPW
NYYLLDLKEQSATQLTEGKGDNTFGGFLSPNDDALYYVKNTRNLMRVDLATLEEKTIYQV
PDDWVGYGTWVANSDCTKMVGIEIKKEDWKPLTDWKKFQEFYFTNPCCRLIRVDLITGEA
ETILQENQWLGHPIYRPGDDNTVAFCHEGPHDLVDARMWFINEDGTNMRKVKEHAEGESC
THEFWVPDGSAMIYVSYLKDDTNRYIRSIDPVTLEDRQLRIMPPCSHLMSNYDGTLLVGD
GSDAPVDVQDDGGYKIENDPFLYVFNLKTGKEHRIAQHNTSWDVLEGDRQVTHPHPSFTP
DNKQVLFTSDVDGKPALYLAKVPDSVWH
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaggtaacaagattcccctaacgtttcatacctatcaggattcagcaaccggc
accgaagttgtgcgcttaaccccgcccgatgttatctgccatcgcaactatttctatcag
aagtgtttcttcaatgacggcagcaagctgctgtttggcgctgcgtttgatggcccgtgg
aattactatctgctggatttaaaagagcagagcgccacgcagttgacggaaggcaaaggc
gacaatactttcggtggcttcctgtctccgaatgacgatgcgctgtattacgttaaaaat
acccgtaatctgatgcgtgtcgatctggctacgctggaagagaaaacgatttatcaggtg
cctgacgactgggtcggctacggtacttgggttgccaactctgattgcaccaaaatggtc
ggtattgagatcaaaaaagaagactggaagccactgaccgattggaaaaaattccaggaa
ttctatttcactaatccttgctgtcgtctgattcgcgtcgatttgataacgggcgaggct
gagactatccttcaggaaaaccagtggttgggtcacccaatttaccgtccaggtgatgac
aacacggttgctttctgccacgaaggtccgcatgacctggttgatgcccgtatgtggttc
atcaacgaagatggcaccaacatgcgtaaagtgaaagagcatgcggaaggcgaaagctgc
actcacgaattctgggttccagatggctcagcgatgatttacgtctcttaccttaaagac
gataccaatcgctacatccgcagcatcgatcccgttacgctggaagatcgtcaactgcgc
atcatgccgccgtgttctcacctgatgagtaactatgatggtacgctgctggtgggtgat
ggttccgatgcaccagtcgatgtgcaggatgatggcggctacaaaattgagaacgatccg
ttcctgtatgttttcaacctgaaaaccggcaaggaacatcgtattgcgcagcacaatacc
tcttgggatgtgttggaaggggatcgtcaggttactcacccgcacccgtctttcacgcca
gataataaacaagtcctgttcacttctgacgtagatggaaaacccgcgctgtatctggcg
aaggttcctgattcagtctggcactaa
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