Pectobacterium odoriferum: BCS7_09840
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Entry
BCS7_09840 CDS
T03424
Name
(GenBank) porin
KO
K22110
oligogalacturonate-specific porin family protein
Organism
pcv
Pectobacterium odoriferum
Brite
KEGG Orthology (KO) [BR:
pcv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcv02000
]
BCS7_09840
Transporters [BR:
pcv02000
]
Other transporters
Pores ion channels [TC:
1
]
BCS7_09840
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
KdgM
OMP_b-brl
DUF2490
Porin_2
Phenol_MetA_deg
Motif
Other DBs
NCBI-ProteinID:
AIU88407
LinkDB
All DBs
Position
complement(2223334..2224050)
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AA seq
238 aa
AA seq
DB search
MKFKLLALAVTSLISVNAMAVTIDYRHEMKDTAKNDHRDRLSMSHRFANGFGLSVEAKWR
QSSADNTPNKPFNETVSNGTEVVASYVYNFNKTFSLEPGFSLDSSSTSNNYRPYLRGKVN
ITDDLSTSLRYRPYYKRNSGDVPNASKNNQENGYNLTAVVSYKFLKDFQVDYELDYKKAN
KAGALQYDNETYNFDHDVKLSYKLDKNWKPYMAVGNVAQDGTTDHRQTRYRVGVQYSF
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttaaattattagctctggcagttacgtcattaattagtgtgaatgcaatggct
gtaacgatcgattaccgtcatgaaatgaaagacactgcaaagaatgatcaccgcgatcgt
ttgtcaatgtcacatcgctttgccaatggttttggtttatctgttgaagcaaaatggcgt
caatccagtgctgacaacacgccaaataaaccatttaatgaaaccgtcagcaacggtact
gaagtcgttgccagctatgtgtacaacttcaacaaaaccttttctttagaaccaggattc
tctttagattcaagctctacctctaacaactatcgtccttacctgcgtggtaaagtgaac
atcactgacgatctgtctacctctttacgttatcgcccttactacaaacgtaatagcggt
gatgttccaaacgcatcaaaaaacaaccaagagaatggttataacttaaccgccgttgtt
agctataaattcctgaaagatttccaggttgattacgaactggactacaaaaaagcaaat
aaagccggtgcacttcaatacgacaatgaaacatacaatttcgaccatgatgtaaaattg
tcttataaattggataaaaactggaagccttatatggcggtgggtaacgttgctcaagac
ggtactaccgatcatcgccaaactcgttaccgtgttggtgtgcaatacagcttctaa
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