Pectobacterium odoriferum: BCS7_10000
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Entry
BCS7_10000 CDS
T03424
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pcv
Pectobacterium odoriferum
Pathway
pcv00061
Fatty acid biosynthesis
pcv00071
Fatty acid degradation
pcv01100
Metabolic pathways
pcv01212
Fatty acid metabolism
pcv02024
Quorum sensing
pcv04146
Peroxisome
Module
pcv_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pcv00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
BCS7_10000
00071 Fatty acid degradation
BCS7_10000
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
BCS7_10000
09145 Cellular community - prokaryotes
02024 Quorum sensing
BCS7_10000
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pcv01004
]
BCS7_10000
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pcv04147
]
BCS7_10000
Enzymes [BR:
pcv01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
BCS7_10000
Lipid biosynthesis proteins [BR:
pcv01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
BCS7_10000
Exosome [BR:
pcv04147
]
Exosomal proteins
Exosomal proteins of breast milk
BCS7_10000
Exosomal proteins of breast cancer cells
BCS7_10000
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
AIU88437
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Position
2256612..2258330
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AA seq
572 aa
AA seq
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MPLKKYLGSDVLEKIWLSRYPADVPAEIDPDRYSSLIEMFENGVRRYADRPAFINMGEVM
TFRKLEERSRAFAAYLQNQLKLQKGDRVALMMPNLLQYPVALFGVLRAGMVVVNVNPLYT
PRELEHQLKDSGASTIVIVSNFAHTLEKVVHNTAVKHVILTRMGDQLSTAKGTLVNFVVK
YIKRLVPKYHLPDAISFRRVLQEGRRQQYVRPDIINSDLAFLQYTGGTTGVAKGAMLTHR
NMQANLAQCLAAYGPVLREGNEWVVTALPLYHIFALTANCLLFFELGGQNLLITNPRDIP
AVVKELKQYPFTAITGVNTLFNALLNNKEFHELDFSTLRLSVGGGASVQRAVAERWEKLT
GKHLLEGYGLTESSPLVAVNPYDLKHYSGSIGLPVASTDVRIIDDNGNDVGPGESGELWV
RGPQVMLGYWQQPAATDDVLKDGWLATGDIVTSDDEGFLRVIDRKKDMILVSGFNVYPTE
IEDVISRHPKVSESAVIGVENEVSGEAVKAFVVRRDNSLTKEELTTHCRRNLTGYKVPKE
IEFCDDLPKSNVGKILRRELRDEKKAKNDAAA
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgccactaaaaaaatatctcgggagtgacgtcttggaaaaaatttggttatcacgctat
ccggcggatgtgccggcggaaatcgatccggatcgctattcgtcgttgattgaaatgttt
gaaaatggcgtgaggcgttatgccgatcgccctgcgtttatcaacatgggtgaggtgatg
acgtttcgtaagctggaggagcggagccgggcatttgcggcctacttacaaaaccagctt
aaattgcagaaaggcgatcgcgtggcgttgatgatgcccaatttgctgcaatatcccgtg
gcgctgtttggcgtgttgcgtgcgggtatggtggttgtcaacgttaacccactgtatacg
ccacgggaactggaacaccagctaaaagacagcggcgccagcacgattgttatcgtgtct
aacttcgcgcatacgctggaaaaagtcgttcataacacggcggtgaagcacgttatcctg
actcgcatgggtgaccagctatccacagcaaaaggcacgctggttaacttcgtagtaaaa
tacattaagcggctagtgcccaagtatcatctgccggatgcgatatcgtttcgtcgtgtt
ttgcaggaagggcggcgccagcagtatgttcggcctgatatcatcaatagcgatctcgcc
tttctgcaatataccggcggcacgacgggtgtagctaagggcgccatgctcacgcaccgc
aatatgcaggcgaatttggcacagtgccttgcggcctatggcccagtattgagggaagga
aatgaatgggtggtaacggcattgccgctgtaccatatttttgcgttgacggctaactgc
ctgctgttctttgagttgggcggacagaatctgctgatcaccaatccccgggatattccc
gcggtagtaaaagaactgaaacagtatccttttactgcgattacgggcgtcaatacgctg
tttaatgcgttgttaaataataaagagtttcatgagctcgatttctcgacactgcgattg
tccgttggaggcggtgcgtcggtgcaacgggcggtagcggaacgctgggagaagttaacg
ggtaaacatctgcttgagggatatgggttaacagaaagttcccccttggtggccgtgaac
ccttatgatctcaagcattacagcggcagcatcgggctgccggtggcatcaacggatgtc
agaatcattgacgacaacggtaacgatgttgggccgggtgagtcgggtgaactgtgggtg
cgcgggccacaggtgatgttaggctactggcagcagcctgccgcgacggacgatgtgtta
aaagacggctggttggcaacgggtgacattgtcacttctgacgatgagggattcctgcgg
gtcatcgatcgtaagaaagacatgattctggtttctggcttcaacgtctatccgacggaa
attgaagatgttatcagccgccatcctaaggtatctgagtcggcggtgattggggtggag
aatgaggtctccggtgaggcagtcaaagcctttgtggtcaggcgtgacaactcgttaacg
aaagaggaactcactacgcactgccgccgcaatctcacgggctataaagtgccgaaagag
atcgaattttgtgacgatttgccgaaatctaacgttgggaaaatcctgcgtcgcgaatta
cgtgacgagaagaaagcgaagaatgacgctgccgcctga
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