Pectobacterium odoriferum: BCS7_10385
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Entry
BCS7_10385 CDS
T03424
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pcv
Pectobacterium odoriferum
Brite
KEGG Orthology (KO) [BR:
pcv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcv03032
]
BCS7_10385
03400 DNA repair and recombination proteins [BR:
pcv03400
]
BCS7_10385
Enzymes [BR:
pcv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BCS7_10385
DNA replication proteins [BR:
pcv03032
]
Prokaryotic type
DNA Topoisomerases
BCS7_10385
DNA repair and recombination proteins [BR:
pcv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BCS7_10385
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
YubG_C
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
AIU88503
UniProt:
A0ABR4VS91
LinkDB
All DBs
Position
2337600..2340200
Genome browser
AA seq
866 aa
AA seq
DB search
MGKALVIVESPAKAKTINKYLGNDYVVKSSVGHVRDLPTSGSVSKKSADSTTKDKTKKKV
KKDEKSALVNRMGVDPYHGWKANYEILPGKEKVVSELKTLAENADHIYLATDLDREGEAI
AWHLREIIGGDDQRFSRVVFNEITKNAIKQAFEKPDTLNIDRVNAQQARRFMDRVVGYMV
SPLLWKKIARGLSAGRVQSVAVRLIVDREREIKAFVPEEYWELHADLLAGSDIQLQMQVT
HHNSKPFKPVNKEQTHAAVSLLENARYVVADREDKPTSSKPGAPFITSTLQQAASTRLGF
GVKKTMMMAQRLYEAGYITYMRTDSTNLSQDALTMVRGYIGEEFGKRYLPESANLYSSKE
NSQEAHEAIRPSDVGVLADSLKDMEADAQKLYQLIWRQFVACQMTPAQYDSTTLIVEAAD
YQLRAKGRTLRFDGWTKVMPALRKNDEDRTLPTVAVGEVLSLQKLLPGQHFTKPPARYSD
ASLVKELEKRGIGRPSTYASIISTIQDRGYVRVENRRFYAEKMGEIVTDRLEENFRELMN
YDFTARMESRLDQVANNQAEWKAVLDEFFNEFSQQLEKAEQDPEEGGMRPNAMVLTSIDC
PTCSRQMGIRTASTGVFLGCSGYALPPKERCKTTINLIPEAEVLNVLEGDDAETNALRAR
RRCEKCGTAMDSYLIDNQRKLHVCGNNPACDGYEIEAGEFRIKGYDGPIVECEKCGSEMH
LKMGRFGKYMACTSETCSNTRKILRNGDVAPPKEDPVPLPELPCEKSDAYFVLRDGAAGV
FLAANTFPKSRETRAPLVEELVRFKDRLPEKLRYLADAPVADNDGNKTQVRFSRKTKQQY
VSSEKDGKATGWSAFYIDGKWVEGKK
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagctctcgttatcgtcgagtccccggcaaaagccaaaacgatcaataagtat
ttaggcaatgactacgtggtgaaatccagcgtcggtcatgtgcgcgatttgccgacgagt
ggctcagtcagtaaaaagagcgcggactcaacgactaaagataaaacgaaaaagaaagtc
aaaaaggatgagaaatccgcgctcgttaatcgtatgggcgtcgacccttatcatggctgg
aaagctaactacgaaatactgccgggtaaggagaaagttgtctccgaattaaaaacgctg
gcggaaaatgccgaccacatctatctcgcaaccgaccttgaccgcgaaggggaagccatt
gcttggcacctgcgggaaatcattggtggtgacgatcagcgtttcagccgggtggtgttt
aacgaaatcacgaaaaatgccattaaacaggcatttgaaaaaccagacacgttgaatatt
gaccgcgtgaatgcccagcaggcgcgtcggtttatggatcgcgtggtgggttacatggtt
tccccgctgctgtggaaaaaaattgcccgtggcttgtccgctgggcgtgtgcagtcggtt
gcggtgcgcctgattgtcgatcgcgagcgtgaaattaaagcgtttgtgccggaagaatat
tgggaactgcacgctgatttgctggcaggcagcgatattcaactgcaaatgcaggtgacg
caccacaacagtaagccgtttaaaccagttaataaagaacaaacgcatgcggcggtcagt
ctgcttgagaacgcgcgctatgtggttgccgatcgcgaagataaaccgactagcagcaaa
ccgggcgcgccgttcatcacctccacgctacaacaggcggccagtacgcgacttggcttt
ggcgtaaaaaagaccatgatgatggcgcagcgtctgtatgaagcaggctacattacctac
atgcgtaccgactcgacgaacctcagtcaggatgccttgacgatggtgcgtggctatatt
ggcgaagaattcggtaagcgctacctgccggaatcagcgaacctttacagcagcaaagaa
aactcgcaggaagcgcacgaagcgattcgtccttccgatgttggcgtgctggccgacagc
ctgaaagatatggaagccgatgcgcagaagctgtatcagctgatttggcgtcagttcgtc
gcctgccaaatgacaccagcgcaatacgactccaccacgctaatcgtggaagctgccgat
tatcagctgcgtgccaaaggccgtacgctgcgtttcgatggttggacgaaagtcatgcct
gcgttgcgtaaaaatgatgaagatcgcacgttgccgaccgtggcagtgggcgaagtgctg
tcgctacaaaaactgctgccagggcaacacttcactaaaccccccgcacgctacagcgat
gcctctttggttaaagagctggaaaaacgtgggattggtcgtccgtctacctacgcgtct
attatttcaaccattcaggatcgcggctatgttcgagtggagaaccgccgtttctatgcc
gagaaaatgggtgaaatcgttaccgatagactggaagaaaatttccgcgaattgatgaat
tacgattttaccgcacggatggaaagccgcctcgatcaggtcgctaataatcaggcggaa
tggaaagcggtattggatgagttcttcaacgaatttagccagcagttggaaaaggcagaa
caggatcctgaagaaggcggtatgcgccccaatgcgatggtgttaaccagcattgactgc
ccaacttgctctcgtcagatgggaattcgtactgccagcaccggtgtgtttttgggctgt
tccggctatgcactgccgccaaaagagcgctgtaaaaccacaatcaacctgatacctgaa
gccgaagtgctgaacgtgttggaaggcgatgatgccgaaaccaacgcgttgcgtgcccgc
cgtcgctgtgaaaaatgtggtacggcgatggacagctatctgattgataatcagcgcaaa
ctgcacgtttgcgggaataacccagcctgtgacggatatgagatcgaagccggtgaattc
cgcatcaagggttatgatggcccgattgttgagtgtgagaaatgtggctccgagatgcat
ctcaaaatgggacgcttcggtaaatacatggcgtgcaccagcgagacatgtagtaacacg
cgtaagatcctgcgtaatggcgatgttgcgccaccgaaagaagatccggtgccgttgcct
gagctgccttgcgagaagtctgatgcctatttcgtattgcgtgacggcgcggcaggggtt
ttccttgcggccaatacgttcccgaaatctcgcgaaacacgggcaccgctggtagaagaa
ctggtgcgattcaaagatcgtttaccggaaaaactgcgctatctggctgatgctcctgtg
gccgataacgatggcaacaaaacgcaggtgcgctttagccgtaagactaaacagcaatat
gtctcgtcagagaaagacggcaaggcaacggggtggtcagcgttttacattgatggcaaa
tgggtggaagggaagaagtaa
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