KEGG   Pectobacterium odoriferum: BCS7_12750
Entry
BCS7_12750        CDS       T03424                                 
Symbol
helD
Name
(GenBank) DNA helicase IV
  KO
K03658  DNA helicase IV [EC:5.6.2.4]
Organism
pcv  Pectobacterium odoriferum
Brite
KEGG Orthology (KO) [BR:pcv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pcv03400]
    BCS7_12750 (helD)
Enzymes [BR:pcv01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     BCS7_12750 (helD)
DNA repair and recombination proteins [BR:pcv03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    BCS7_12750 (helD)
SSDB
Motif
Pfam: Helicase_IV_N UvrD-helicase AAA_19 UvrD_C UvrD_C_2 AAA_30 AAA_12 AAA_11 DEAD ResIII
Other DBs
NCBI-ProteinID: AIU88885
LinkDB
Position
complement(2882730..2884787)
AA seq 685 aa
MELKSTSLGKHLAQHPYNRVRLLNAGVEVSGDKHQYLIPFNQLLNIHCKRGLVWGELEFE
LPAGKVVRLHGTEWQETQAFYRHLLKSWLDWSEEMSLISAEVLLRQTDSIQTLTLQDKWF
SRQTLTTLQNAIRDSLGALPLPVSRLETFDNCRDHYQHCLRWLEQGDETRTAVNQAWVDR
TLVAEQPFFDTVESSPLNVSQSKAVINGEEGVLVLAGAGSGKTSVLVARAAWLMHRQEAT
PDQILLLAFGRKAAEEMNERIWERLNTDEIQAKTFHALALHIIQQTSRKAPMISQLESDA
KQRRELLISHWQQQCAEKKTQANGWRRWLTEELEWDVPEGDFWNDPKLAGRLAGRLERWL
GLMRMHGGSQSEMIEQAPEPIRAAFQQRIRLMAPLLKAWKKALKDENAVDFSGLIHQAVN
LLDKGRFVSPWKHILVDEFQDISPQRATLLAALRRQNSRTCLFAVGDDWQAIYRFSGAEL
ALTTAFEQHFGVGEQCALDTTYRFNERIGEVANTFIQQNPYQLKKPLNSLSKGDKKAVAI
LPQDQLEPLLDKLSGFVKADERILVLARYHHLRPAILEKAATKWPNLQIDFMTVHASKGQ
QAEYVIIVGMHEGKDGFPAPTRESVIEAVLLPEPEDFPDAEERRLLYVALTRAKHRVWLL
QDVANPSVFIEHLHRLGVPMQRKPG
NT seq 2058 nt   +upstreamnt  +downstreamnt
atggaactgaaatctacctcgttaggtaaacatctggcccagcatccttacaaccgggtg
cggttactgaatgccggtgtcgaagtgagtggcgataaacatcaatacctgattcccttt
aatcagttgctgaatattcactgtaaaagagggctggtgtggggagagctggaatttgaa
ttgccagccggaaaagtggtgcgcttacacggaacagagtggcaggaaacgcaggctttt
taccgccatcttcttaaatcctggctcgattggagcgaggagatgagtctgatcagcgct
gaggttttgctgcgccaaacggacagtattcaaacactgacgctacaagacaaatggttt
agccgtcagactctgacaacgttgcagaatgccattcgcgattctctgggggctttgcct
cttcctgtttctcgtcttgaaacctttgataactgtcgtgatcactaccagcattgcttg
cgctggcttgagcagggcgatgagacgcgtactgcggtgaatcaggcatgggtggatcgc
acgctggtggcagaacaacctttctttgatacggtggagagctcgccattaaatgtgtcg
cagagtaaagcggtgattaatggcgaagagggtgttctggtactggctggcgcaggcagt
gggaaaacctccgtgctggtggcccgagcggcatggttaatgcatcgtcaagaagccacg
cccgatcagattttgctgctggcatttggccgtaaagcggcagaagagatgaacgagcgc
atctgggagcggctcaatacggatgaaattcaggctaagacgttccatgcgctggcattg
cacattattcagcagactagccgcaaggctccgatgataagccaattggaaagtgatgcg
aaacagcgccgcgaactgttgatttctcactggcaacagcagtgtgccgagaaaaaaacg
caggccaacgggtggcgacgttggttaacggaagagctggaatgggatgtgccagaaggc
gatttctggaacgacccgaagctggctgggcggttggctgggcgacttgagcgatggtta
gggttgatgcgtatgcacggcggcagccagagcgaaatgattgagcaggcaccagaacca
attcgggcagcgtttcagcaacgaattcgcctgatggcgccgttgttgaaagcctggaaa
aaagcgcttaaggacgagaatgccgtcgatttctctggccttatccatcaggctgtgaac
ttgctggataaagggcgctttgtgagtccttggaagcacattctggtggacgaatttcaa
gatatctcgccacaacgtgcaacgttgttagcagcattgcgtcgacaaaatagccgtacc
tgtctttttgctgtaggggatgactggcaggcaatttaccgttttagcggtgctgaactg
gcgttgacgacagcatttgaacagcatttcggcgtaggcgagcagtgcgcgctggatacc
acctatcgttttaatgaacgcattggtgaagtcgccaacacgttcatacagcaaaatccg
tatcagttgaagaaaccgcttaatagtttgagtaagggagataaaaaagcggtggccatc
ctgcctcaggatcagcttgagccacttctggataaactgagcggctttgtgaaagctgat
gaacgcattcttgtgctggcgcgttatcaccatttacgcccggcgattctagagaaagcc
gcgaccaaatggccgaatttgcagattgatttcatgacggtgcacgccagtaaagggcag
caggcggaatatgtcattattgtgggtatgcatgaaggaaaagatgggttcccagcaccg
acaagagagtccgttattgaagcggtgctgttacctgaaccggaggacttccccgatgct
gaagagcgacgtttactgtatgtggcgttgacgagggcgaaacatcgcgtttggttacta
caggacgtggcgaatccatcggtgtttattgaacatcttcatcgtttaggcgtaccgatg
cagcgtaagccgggataa

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