Pectobacterium odoriferum: BCS7_14645
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Entry
BCS7_14645 CDS
T03424
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
pcv
Pectobacterium odoriferum
Brite
KEGG Orthology (KO) [BR:
pcv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcv03009
]
BCS7_14645
Enzymes [BR:
pcv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
BCS7_14645
Ribosome biogenesis [BR:
pcv03009
]
Prokaryotic type
rRNA helicases
BCS7_14645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
AIU89192
LinkDB
All DBs
Position
complement(3316870..3318252)
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AA seq
460 aa
AA seq
DB search
MSTTSFSSLALPAEQLSNLNELGYTDMTPVQAATLPAVLSGADVRAKAKTGSGKTAAFGI
GLLDRIVVSDFTTQALVLCPTRELADQVSKELRRLARFAQNIKILTLCGGQPMGQQLDSL
VHAPHIVVGTPGRIQDHLRKQSLSLDSLKVLVLDEADRMLDMGFTDAIDDVISYTPTDRQ
TLLFSATYPEEIEQISARVQRQPQRFEVADGVEEPAIEQRFYETTKEQRLPLLIAILGHY
QPASCVVFCNTKRDCQSVFDALDMRGISVSALHGDLEQRDRDQVLVRFANRSCRVLVATD
VAARGLDIKELELVVNFELAFDPEVHVHRIGRTGRAGTKGLAVSLCTPQEMNRANLIEDY
LGMRIKWTPSDEISRSGEVALEPEMMTLCIDGGRKAKIRPGDILGALTGDAGLTAAEVGK
IDMFPMHAYVAIRKASAKRALQQLQKGKIKGKSCKARLLK
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
gtgagtacaacctctttttcttccctcgcgctgcccgcagagcagttatccaatcttaat
gaactgggctataccgacatgacgccagtccaggcggcaacgttgccagccgttctgagc
ggcgcagacgtgcgggccaaggcgaaaaccggtagcggcaaaacggcggcctttggcatt
gggctgctggatcgcattgtcgtgagcgactttaccacgcaggcgctggtgctgtgcccg
acgcgtgagttggccgatcaggtcagcaaagagctgcgtcgtctggcgcgttttgcgcaa
aatattaagattctgacactgtgcggtggtcagccgatgggccagcagcttgattcgctg
gttcatgctccgcacattgttgtcgggacgccgggccgtattcaggaccatttacgcaag
cagtcgctgtctctggatagcctgaaagtgctggtgctggacgaagcggatcgcatgctg
gacatgggctttactgacgcgattgatgatgtgatttcctatacgccgaccgatcgtcaa
actctgctattttctgctacctatccggaagagatcgagcagatcagcgcacgcgttcag
cgtcagccgcaacgtttcgaggttgcagacggtgtagaagagccggccattgaacaacgt
ttctatgagacgacgaaagagcagcgcctgccgctgttgattgccattttgggccattat
cagcctgcgtcctgcgtggtgttctgtaacacgaagcgtgattgccagagtgtatttgat
gcgctggacatgcgtgggattagcgtatccgcgctgcatggtgacctggaacagcgcgat
cgcgatcaggttctggtgcgttttgctaaccgcagttgtcgtgtgctggtggcaaccgac
gttgcggctcgcggtctcgatattaaagagctggagctggtagtgaattttgagctggct
ttcgaccctgaagttcacgttcaccgcattggcagaacgggccgcgcgggtacgaagggc
ctggcggtgagcctgtgtacaccacaggaaatgaaccgcgctaatctgattgaagattat
ctcggtatgcgcattaaatggacaccgtcggatgagattagccgcagtggcgaggttgcg
ctcgaacctgagatgatgacgttgtgcattgatggtggcagaaaagccaaaatccgtccc
ggtgatatcctcggtgcgttaaccggcgatgcaggattaacggcagcggaagtggggaaa
attgatatgtttccgatgcatgcctatgtggcaatccgtaaagccagcgccaaacgtgcg
ttgcagcagctccagaaaggcaaaatcaaaggaaaaagctgcaaggccagattgttaaag
taa
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