Pectobacterium odoriferum: BCS7_15800
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Entry
BCS7_15800 CDS
T03424
Symbol
pcnB
Name
(GenBank) poly(A) polymerase I
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
pcv
Pectobacterium odoriferum
Pathway
pcv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BCS7_15800 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcv03019
]
BCS7_15800 (pcnB)
Enzymes [BR:
pcv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
BCS7_15800 (pcnB)
Messenger RNA biogenesis [BR:
pcv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
BCS7_15800 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
AIU89386
LinkDB
All DBs
Position
3585827..3587185
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AA seq
452 aa
AA seq
DB search
MVESEEPRQHLTVIPRDQHTISRSDISDNALKVLYRLNKAGYEAYLVGGGVRDLLLGKKP
KDFDITTNATPDQVRKLFRNCRLVGRRFRLAHIMFGPEVIEVATFRGHHEQHQEQQEVKN
SSQQAQSGMLLRDNIFGSVEEDAQRRDFSINSLYYSISDFSVRDYTDGLNDLRQGVIRMI
GDPETRYREDPVRMLRAVRFAAKLNMTVSPETAEPIPRLASLLHDIPAARMFEESLKLLQ
SGYGYPTYKMLCEYQLFQPLFPLLSRYFTPNGDSTLERMVAQVLKNTDQRLQNDMRVNPA
FLFSAMLWYPLVEHAQKLAQESGLAYFDAFSLAMNDVLDEQCRSLAIPKRITSLVRDIWQ
LQTRLSRRQGKRAYKLMEHPKFRAAYDLLCLRAEIENHQDLLRLAQWWGEFQVAAPPRQQ
NMLKSLDDGPTPHRRSRPRRPRKPTTARRDPA
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggtcgaatcagaggaaccgcgccagcatctgacggtgattccgcgtgaccaacatact
atttcacgcagcgatatcagcgataacgcgctgaaagtactttatcgcctgaacaaagcg
ggctacgaggcttatctggttggcggcggcgtacgcgaccttcttctgggcaaaaagccg
aaagattttgatatcaccactaacgccactcccgatcaggtgcgcaagttattccgcaac
tgtcgtttagtcgggcgtcgtttccgtctcgcccatatcatgttcgggccagaggtgatt
gaagttgccacgttccgtggtcaccacgaacaacatcaggaacagcaagaagtcaaaaac
tcctctcagcaggcccaaagcggcatgctgttacgcgacaatattttcggttccgttgaa
gaagacgcccagcgccgtgatttctcgatcaacagcctctattacagcatttctgatttc
agcgtacgtgactataccgatggcctgaacgatctgcgtcagggcgtcatccgtatgatt
ggcgatcctgaaacgcgctaccgtgaagatccggtgcgtatgctgcgcgccgtccgtttc
gccgctaagctgaacatgacggtcagcccggaaaccgcagaaccgattcctcgtctggct
tcattgctgcacgatatccctgcggcgcgcatgtttgaagagtcgctgaagctgctgcaa
tcaggctatggctacccgacctataaaatgctgtgtgaataccagctgttccagccactt
ttcccgctgctgagtcgctacttcacaccaaacggcgattccacgctggaacgcatggtt
gcacaggtactgaaaaataccgatcagcgtctgcaaaacgacatgcgggtcaacccggcg
tttttgttttccgccatgctgtggtatccgctggttgagcatgcacaaaagctggctcag
gaaagcgggctggcttacttcgatgccttctcgctagcgatgaacgatgtactggatgaa
cagtgccgttctctggcgatccctaaacgcattacctctttagttcgtgatatctggcag
ttgcaaacgcgactgtctcgccgtcaaggtaaacgcgcttataagctgatggaacatcct
aaattccgcgccgcgtatgacttgctttgcctacgtgccgaaatcgaaaaccatcaggat
ctgctgcgcctggctcagtggtggggagaatttcaggtagccgcaccgccacgtcagcaa
aacatgctgaaatcgctggatgacggcccgacgccacatcgtcgttcccgccctcgtcga
ccgcgtaaaccgacaacagcacgtcgagatccagcataa
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