Pectobacterium odoriferum: BCS7_17220
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Entry
BCS7_17220 CDS
T03424
Name
(GenBank) translocation and assembly module TamB
KO
K09800
translocation and assembly module TamB
Organism
pcv
Pectobacterium odoriferum
Brite
KEGG Orthology (KO) [BR:
pcv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcv02000
]
BCS7_17220
Transporters [BR:
pcv02000
]
Other transporters
Pores ion channels [TC:
1
]
BCS7_17220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
Motif
Other DBs
NCBI-ProteinID:
AIU89606
LinkDB
All DBs
Position
complement(3899421..3903458)
Genome browser
AA seq
1345 aa
AA seq
DB search
MMDDKNEKKAQDSVAEENVTHDNAPATPSRKGRWWKRVGIGFVAFLLFLVVGLGLLVGTT
PGLHLLLNTAARVVPGLDIASVSGGWRDLTLKNVSYEMPGVTVKSDEFHLSLTLGCLRKS
QLCINDLSANRVDVVVDTKALPVAAEPPPPSTPVTEISTPFPISLRQLTLSNVQVTVDDT
VISLGEFRTGMQWEERALTLLPTKISALLVALPKTPVDVLEDGKVTAVEMASVVKETAQS
VREAAEQGSSQTLHIDKVLKANNTVAAATATAPIPTASTSKVDSASDKPAEPEQPLGERL
SELFSKPLLPDLPQFTLPLDLNIVEIHGEQLRLTGDQDILINNLFVQASTQQQHLRLDKL
IVQSPQGGLNVRGEATLSDSWPVSLSANGVLNVEPLKGEKLKLTVDGGLREQLNVALNLS
GPQRAQLELQTQLAEAGLPLALTLQTERVRWPFTGATQYQADNIRLRFNGKATDYALSLR
GDLSGADIPPATLLLDGKGNEQQFTLSRLRLAALQGNADLSALIDWSKAISWRSELLLNG
INTAKQWPEWPAKVDGKITTRGSVYGGSWQLQVPELRLDGNVKANKLTARGELRGNAAGQ
WTIPALNLALGRNQLNVKGDLSDKWQLDADINAPSLDGMLPGLAGRAIGTLKLRGNLREP
QMLADITASGLRWQAMTISQVRVEGDVRSEQQIQGKLAVRLEALKQDGLNIALLTLDASG
NEKQHQLRLTMQGEPVAAQLALSGSFDRQEQRWRGTLNNTRFDTPVGEWRLTQDMALDYL
NVQQKITIGTHCWRNPNAELCVPKAIEAGPSGQASIRLNRFDLAMLKPFLTADTALAGTF
TGGADISWQAGQDLPQAKVSLVGNGVSVRQQMQGNTLPIDFDTFTLNAGLDRGRAQLGWL
MAIRENGRFSGDIQVTDPQGRRNLGGSVTINTISLALLNPALSKGEKAAGILNANLRLAG
DAARPQLFGQMALEQLDIDGNWMPIDLTNGRLAVNFSGMSSTLQGFLKTNNGQLNLGGNA
DWSRPDAWRARIAAKGQKLRVTVPPMARLDVSPDIVFEATPQLFALNGSVSIPWARIVVK
DMPESAVAVSSDEVMLDAQRQPLKKASAAIPINSNLTIRVGNDVQLDAFGLAARLQGDLK
MVQDERGLGLNGQIDIPSGRFKAYGQDLIVRKGLILFSGPPDQPILNIEAIRNPDNTAND
VIAGVRVTGMAATPKLEVFSDPAMSQQEALSYLLRGQGLDSGGADSSAMTSMLVGLGVAQ
SGQVVGKIGEAFGVSNLALDTQGVGDNSQVVVSGYVLPGLQVKYGVGIFDSLATLTLRYR
LMPKLYLEAVSGISQALDVLYQFEF
NT seq
4038 nt
NT seq
+upstream
nt +downstream
nt
atgatggatgataaaaacgaaaaaaaagcacaggattcggtggcggaagaaaacgtcacg
cacgacaacgcgccggcgacgccttcacgaaaagggcgctggtggaaaagagtcggtatt
ggctttgttgccttcttactgtttctcgttgttgggctaggattattggtggggaccacg
ccgggcctgcatctgttgctgaataccgccgcacgcgtggtgccggggctggacattgcc
agcgtgagcggcggctggcgtgatttaacgctgaaaaacgtcagctatgaaatgccgggc
gtgacggtaaagagcgatgaatttcatctgtcgctcacgctgggctgtttgcgtaaaagt
cagctgtgcatcaatgacctgtcggcaaaccgtgttgatgtggttgtggataccaaagcc
ttgcctgtggcggcagagccaccaccgccttcaacgccagtaacggaaatttcaacacca
tttccgatttctctgcgccagctaacgctcagcaacgttcaggttaccgtggacgatacg
gtgatttcactgggcgagttccgcacgggaatgcagtgggaagagcgtgcgttgacgctg
ctaccgaccaaaatcagcgcgctgctggtggccttgccgaagacccccgtcgatgtgctg
gaagatggcaaagtgacggcggtggaaatggcgtccgtcgtcaaagaaacggcgcagagc
gtgcgtgaagcagccgagcaaggttcatcgcaaacgcttcacatcgataaagtactcaag
gcaaataatacggtagcagcggccacggcgacagctccgataccgacggcgtcgacatct
aaagtggatagcgcctctgacaagcctgccgagcctgaacaaccgctgggtgaacgcctg
agcgagctgttctccaaaccgctattacctgatttaccgcagtttacgctaccgctggat
ctgaacattgtcgagattcacggtgaacagttgcggctgacgggcgatcaggacattttg
attaataaccttttcgtacaggcatcgacccagcaacagcatttgcgtctggacaagctg
atcgtgcaatcgccacagggtggattgaatgtgcgcggtgaagcgacactcagcgatagc
tggcccgtctcgctgtcggcgaacggcgtgctgaatgtcgaaccgctcaaaggcgagaag
ctgaaactgacggttgatggcggcctgcgcgaacagctgaatgtggcgctgaacctctcc
gggccgcagcgtgcgcaattggagctgcaaactcaactggcggaagccgggctgccgctg
gcgttgacgctgcaaaccgaacgcgtgcgttggccgtttacgggcgcgacgcaatatcag
gctgacaacatcaggctgcgttttaacggcaaagcgacggactacgcgctgtcgctgcgc
ggcgacctgagcggcgcggatattcctcccgcaacgctgttgctcgatggtaaaggcaat
gagcagcagtttacgctgagccgcctgcggctggcggcgttacagggcaatgccgatctg
agtgcgcttatcgactggagcaaagccataagctggcgcagcgagctactgttgaacggg
attaacaccgcgaaacagtggcctgaatggcccgcgaaagtagacggtaagataacgacg
cgcggcagcgtctatggcggtagctggcagttacaggtgccggaattgcgtctggacggc
aacgtgaaagcgaataagctcacggccagaggtgaactgcgcggtaacgcggcgggccag
tggacaattccagcactgaatctggcgttaggccgcaaccagttgaacgtcaaaggcgac
ctgagcgataagtggcagttggatgcagacatcaatgcaccgtcgctggacggcatgttg
cccggtctggcagggcgcgccatcggcacacttaaattacgtggcaatctgcgtgaaccg
cagatgctggcggatattacggcttctggcctgcgttggcaggcgatgacgattagtcag
gtgagggtggaaggcgatgtgcgctccgagcagcagattcagggcaagctggccgtacgt
ctcgaagcactgaagcaggacggcctgaatattgcgctgttgacactggatgccagcggt
aacgagaaacagcatcagctccggctgactatgcagggcgaaccggttgccgcgcaactg
gcactttcgggtagtttcgatcgtcaggaacagcgctggcgcggcacgctgaacaatacc
cgcttcgacacgccagtgggtgaatggcgtctgacgcaggatatggcgttggattatctg
aatgtgcagcagaagatcaccatcggcacgcactgctggcggaatccgaacgcagagctt
tgcgtaccaaaagcaattgaagctgggccgagcggacaggcgagcattcgactgaaccgc
ttcgatctcgccatgctgaaaccgttcctgacggcggatacggcgctagccgggacgttc
accggtggtgcggatatcagttggcaggcagggcaagatttaccacaggcgaaagtgtcg
ctggtgggtaacggcgtcagcgttcgccagcagatgcagggcaacacgctgccgattgat
ttcgatacctttacgctgaatgccgggctcgatcgcgggcgggcgcagctcggctggctg
atggcgattcgagagaacggacgcttcagcggtgatattcaggtgaccgatccacagggc
cgacgcaatctcggtggcagcgtcacgatcaacactatttcgctggccttgctcaaccct
gcgttgagtaaaggagaaaaagcggcggggatactgaatgcgaacctgcgtctggcgggg
gatgctgcgcgtcctcagctcttcggccagatggcgctggagcaactggatatcgacggc
aattggatgccgatcgatctgaccaacgggcggctggcggtgaatttcagtgggatgtcg
tcaacgctgcaaggcttcctgaaaacgaataacgggcagttgaatctcggcgggaacgca
gactggtcgcggcctgatgcctggcgtgcgcggatcgcagcgaaaggacagaagctgcgg
gtgacggttccgccgatggcgcggctggatgtctcaccggatattgtcttcgaagccacg
ccgcaactgtttgcgctaaatggatcggtcagtattccgtgggcgcgcattgtcgttaaa
gacatgccggaaagtgcggtggcggtatcatcggatgaagtgatgctggatgcccagcgt
cagccgctgaagaaagccagcgccgcgattccgattaacagcaacctgacgatccgcgtc
ggtaatgatgtgcaactggatgcgttcgggctggctgctcgcctacagggtgacctgaaa
atggttcaggacgagcgtggattagggctgaacggccagatcgacattccgtctggtcgc
tttaaagcctatgggcaggatctgatcgtccgcaaaggactgattctgttctccggccca
ccggatcagccgatcctgaatatcgaagccattcgtaacccagacaacacggcgaatgat
gtcattgctggggtgcgcgtcaccggcatggccgcgacaccgaagctggaagtcttctcc
gatccggccatgtcacagcaggaagcgctctcttatctgctgcgtggacagggtttggac
agcggtggagcagatagctcggcaatgacctcaatgttagttggtttaggggttgcacaa
agtggtcaagttgtgggtaaaatcggcgaggcctttggcgtaagtaatttagctctggat
acacagggtgttggcgataattctcaagttgtcgtcagcggctacgtccttccgggtctg
caagtaaaatatggtgttggcatattcgattctttggcaacgttaacgctacgttatcgc
ctgatgccaaaactatacttggaagcggtgtctggaattagccaggcattagatgtgctc
tatcagtttgagttctag
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