Pectobacterium odoriferum: BCS7_19260
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Entry
BCS7_19260 CDS
T03424
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pcv
Pectobacterium odoriferum
Pathway
pcv00040
Pentose and glucuronate interconversions
pcv01100
Metabolic pathways
pcv02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pcv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
BCS7_19260
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BCS7_19260
Enzymes [BR:
pcv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
BCS7_19260
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
AIU89968
UniProt:
A0ABD6VS92
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Position
4357047..4358171
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AA seq
374 aa
AA seq
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MKYLLPSAAAGLLLLAAQPTMAANTGGYATTDGGDVSGAVKKTARSLQEIVDIIEAAKKD
SSGKAVKGGAYPLVITYNGNEDALIKAAEANICGQWSKDPRGVEIKEFTKGITILGTNGS
SANFGIWMVNSSNVVVRNMRFGYMPGGAKDGDAIRIDNSPNVWIDHNEIFAKNFECAGTP
DNDTTFESAVDIKKGATNVTVSYNYIHGVKKVGLSGSSNTDTGRDLTYHHNIYSDVNSRL
PLQRGGKVHAYNNLYDGIKSSGFNVRQKGIALIESNWFENALNPVTARNDDSNFGTWELR
NNNITSPSDFAKYKITWGKPSTPHINADDWKSTGKFPAVPYSYSPVSAQCVKDKLASYAG
VGKNLAVLTAANCK
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgaaatacctactgccttctgcagccgctgggctgttgctgctcgcggcccaaccgaca
atggcggcaaatacggggggttatgccaccactgacggcggcgacgtttctggtgctgtg
aaaaaaacggcgcgttctctgcaagagatcgtcgatatcattgaggctgcgaaaaaggac
tcaagcggtaaagcggtcaaaggtggggcctacccgctcgtgattacctacaacggtaat
gaagatgcgttaatcaaagccgccgaagctaacatctgcggccagtggagcaaagatccg
cgcggtgtggaaatcaaagagttcaccaaagggatcaccatcctcggaaccaacggttct
tccgctaacttcggcatctggatggttaactcttccaacgttgtcgtgcgtaacatgcgc
ttcggctatatgccgggcggcgcaaaagatggcgatgccatccgtattgataactcgcca
aacgtctggatcgatcacaacgagatcttcgccaagaacttcgaatgtgctgggacgcca
gacaacgacaccacttttgaatcggctgtcgatatcaaaaaaggtgccaccaacgtcacg
gtatcctacaactatatccatggcgtgaaaaaagtgggattgagcggttcaagcaatacg
gatacgggtcgcgacctgacttaccaccacaatatttacagcgatgttaactcacgtctg
ccactgcaacgtggtggtaaagtgcatgcttataacaacctgtatgacggtatcaaaagt
tcaggctttaacgtacgtcagaaagggatcgcactgatcgaaagtaactggttcgaaaat
gcactcaacccagtgaccgcacgtaatgacgattccaacttcggtacttgggaactccgt
aacaacaacattaccagcccatctgattttgctaaatacaaaatcacgtggggtaaacca
tccacaccgcacatcaatgcggatgactggaagagcaccggtaaattcccagccgttcca
tatagctactctccagtttctgcacagtgcgtgaaggataaactggcaagctatgccggc
gtaggtaaaaacctggcggtactgacagcagctaactgtaaataa
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