Pectobacterium odoriferum: BCS7_19845
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Entry
BCS7_19845 CDS
T03424
Symbol
uvrD
Name
(GenBank) DNA-dependent helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pcv
Pectobacterium odoriferum
Pathway
pcv03420
Nucleotide excision repair
pcv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pcv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BCS7_19845 (uvrD)
03430 Mismatch repair
BCS7_19845 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcv03400
]
BCS7_19845 (uvrD)
Enzymes [BR:
pcv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BCS7_19845 (uvrD)
DNA repair and recombination proteins [BR:
pcv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BCS7_19845 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
BCS7_19845 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
PhoH
Motif
Other DBs
NCBI-ProteinID:
AIU90071
UniProt:
A0A094RVD4
LinkDB
All DBs
Position
complement(4498867..4501029)
Genome browser
AA seq
720 aa
AA seq
DB search
MDVSDLLDGLNDKQRDAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLLSVENCSPYSIMAV
TFTNKAAAEMRHRIDHLIGTSQGGMWIGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL
RLLKRLIRALNLDEKQWPPRQAMWFINGKKDEGLRPQHIESYGNPIEQTWQRVYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHVLNHYRERFTNILVDEFQDTNRIQYAWIRMLAGDS
AKVMIVGDDDQSIYGWRGAQVENIQLFLKDFAGAETIRLEQNYRSTSNILKAANALIAHN
GGRLGKNLWTDGAEGEPISLYCAFNELDEARYVVNRIKAWQENGGALSDNAILYRSNAQS
RVLEEALLQQSMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD
RTLDVVRQTARDRQLTLWQSTRALLQEKVLAGRAAASLQRFIELIDALAYETSELPLHIQ
TDRAIKDSGLWSMYEQEKGEKGQARVENLEELVTATRQFSYQEEDQDLMPLQAFLSHAAL
EAGEGQADANQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMQKLTITYAESRRLYGKEAYHRPSRFVGELPEECVEEVRLRASVSRPVNHQRLG
TPITQNDSGYKLGQRVRHAKFGEGTIVNLEGSGDHARLQVAFQGQGIKWLVAAYARLETV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttctgatctgctcgatggcctcaacgacaaacagcgtgacgcggtagccgcg
ccgcgcagcaatttattggtgctggcgggggcaggcagcggcaaaactcgggtactggta
caccgcattgcctggctcttgtctgtcgaaaactgctcaccgtattccatcatggcggtg
acgtttaccaacaaagcggcggcggagatgcgccaccgtatcgaccatctgatcggcacc
agtcagggcggcatgtggattggtactttccacgggctggcacaccgcctgctgcgtgcg
caccatatggatgccaatctgccgcaggatttccagattctggacagcgaagatcagctg
cgcctgctgaagcgcctgattcgggcgctcaatctggatgagaaacagtggccaccgcgt
caggcgatgtggttcatcaacgggaagaaagatgaaggactgcgtccgcagcacattgaa
agctacggcaacccgatcgagcaaacgtggcagcgcgtgtatcaagcctatcaggaagcg
tgcgatcgcgccggactggtggatttcgccgaactgctgctgcgtgcgcacgagttgtgg
ctgaacaagccgcatgtgctgaatcactatcgcgaacgttttaccaatattctggtggac
gaattccaggatactaaccgtattcagtatgcctggatccgcatgctggcgggcgacagc
gccaaggtgatgatcgttggggatgacgatcagtctatttacggctggcgtggggcgcag
gtcgaaaatattcagctgttcctgaaagattttgccggcgcagaaacgatccgtttggag
cagaactatcgctcgaccagcaatatcctgaaagcggcgaatgcgctgattgcccacaac
ggcggacgactcggcaagaacctgtggaccgatggtgcagaaggtgagccgatttcgctg
tattgcgcgttcaatgagctggatgaggcgcgttacgtcgtcaaccggattaaagcctgg
caggaaaatggcggtgcgctgagcgataacgccattctgtatcggagcaacgcccagtcg
cgcgtgctggaagaggcgttgttacagcagagtatgccgtaccgtatctatggcggaatg
cgcttcttcgaacgtcaggaaatcaaagatgcgttgtcttatctgcgcctgatcgccaac
cgtaacgacgatgcggcgttcgagcgtgtggtgaatacaccgacacgcggcattggcgat
cgtacgctggacgtggtgcgccagacggcgcgcgatcgtcagctgacgctgtggcaatcc
acgcgggcgctgttgcaggagaaagtgctggctgggcgcgcggcggcctcgctgcaacgc
tttatcgaactgattgatgcactggcctatgaaacctctgagctgccgctgcatattcaa
accgaccgggcgattaaggattccggcctgtggagcatgtacgaacaggaaaaaggcgag
aaagggcaggcacgagtagaaaacttggaagaattggtgacggctacgcgccagttcagc
tatcaggaagaagatcaggatctgatgccgcttcaggctttcctgtcgcatgccgcgctg
gaagcaggcgaaggtcaggcagacgccaatcaggacgcggtgcagcttatgacgctgcac
tcggcgaaagggctggaattcccgcaggtgtttatcgtcggtatggaagaaggcatgttc
ccaagccagatgtcgctggatgaaggtgggcgtctggaagaagagcgtcgtttggcttat
gtcggcgtcacgcgtgcgatgcaaaagctcacgataacctacgcggaatcccgccgttta
tacggcaaagaagcctatcatcggccttcccggtttgtcggcgaactgccggaggagtgt
gtggaagaagtgcggctacgcgccagcgtctcccgccctgtcaaccaccagcgcctcggc
acaccaatcacgcaaaacgacagcggctacaaattggggcagcgggttcgccatgccaag
ttcggtgaaggcacgatcgtgaatctggaaggcagcggcgatcatgcccgccttcaggtt
gcgtttcaggggcagggtattaaatggctggtcgccgcctacgccagactggaaacggtg
taa
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