KEGG   Pectobacterium odoriferum: BCS7_19865
Entry
BCS7_19865        CDS       T03424                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
pcv  Pectobacterium odoriferum
Pathway
pcv00300  Lysine biosynthesis
pcv00470  D-Amino acid metabolism
pcv01100  Metabolic pathways
pcv01110  Biosynthesis of secondary metabolites
pcv01120  Microbial metabolism in diverse environments
pcv01230  Biosynthesis of amino acids
Module
pcv_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:pcv00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    BCS7_19865 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    BCS7_19865 (dapF)
Enzymes [BR:pcv01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     BCS7_19865 (dapF)
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF CntK_N
Other DBs
NCBI-ProteinID: AIU90075
UniProt: A0ABD6VQ63
LinkDB
Position
complement(4503605..4504429)
AA seq 274 aa
MQFAKMHGLGNDFMVVDAVTQNVYFSPELIRRLADRHCGVGFDQLLVVEPPYDPELDFHY
RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIAVSTQTGRMVLSVTDDELVRVNMGE
PNFEPQQVPFRAVKAEKTYIMRADEHTVLCGVVSMGNPHCVIQVEDVDTAKVETLGPLLE
SHERFPERANIGFMQIVDSHTVRLRVYERGAGETQACGSGACAAVAVGIQQGLLSANVRV
SLPGGELDIQWNGPGHPLFMTGPATHVYDGFIHL
NT seq 825 nt   +upstreamnt  +downstreamnt
atgcagttcgctaagatgcacgggttaggcaacgatttcatggttgttgatgccgttacg
caaaacgtttatttttcacccgaattgattcgccgtttggcggatcgacactgtggtgta
gggttcgaccaactgctggttgtcgagccgccctacgatcctgaactggattttcattac
cgcatttttaacgcggatggcagcgaagtggcacagtgtggtaatggtgcgcgctgcttt
gctcgctttgtccgcttgaaagggctgaccaacaagcgtgatattgccgtcagtacgcag
actggccggatggtactgtcggtgacggacgatgaactggtgcgcgtcaacatgggcgaa
ccgaatttcgagccgcaacaggtgccttttcgcgcggtcaaagccgagaaaacctacatc
atgcgtgcggacgaacacacggtgctgtgtggcgtggtgtcgatgggtaacccgcactgt
gtgattcaggttgaggatgtggacacggcgaaggtggaaacgctggggccgctgctggaa
agccacgagcgttttcccgagcgcgccaacatcggttttatgcaaattgttgatagccac
actgtccgtctgcgggtgtatgaacgcggtgcgggagaaacgcaggcgtgcggtagcggc
gcgtgtgctgctgtggcggtagggatccagcaggggttattgtccgcgaacgttcgcgta
tctctgccgggcggggagttggatatccagtggaatgggccgggacatccgttattcatg
accgggcctgcaacgcatgtctacgatggatttattcatttatga

DBGET integrated database retrieval system