Pectobacterium odoriferum: BCS7_20350
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Entry
BCS7_20350 CDS
T03424
Name
(GenBank) transcriptional regulator
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
pcv
Pectobacterium odoriferum
Brite
KEGG Orthology (KO) [BR:
pcv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcv03000
]
BCS7_20350
Transcription factors [BR:
pcv03000
]
Prokaryotic type
Helix-turn-helix
LacI family
BCS7_20350
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
TetR_N
HTH_Crp_2
HTH_91
MarR_2
AIRS
HTH_Tnp_ISL3
DUF3606
Motif
Other DBs
NCBI-ProteinID:
AIU90150
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Position
4613174..4614217
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AA seq
347 aa
AA seq
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MKQKKGVTTATMKDVADEAGVSTATVSRTLMNPEKVSATTRRKVEQAVIAVGYSPHALNR
NLKRNESRTILTIVPDICDPYFSEIFRGIEETAAEHGYLVLIGDCAHQHQKEKTFVDLII
TKQIDGMLLLGSNLPFDASQEEQRNLPPMVMANEFSPDLALPTVHIDNLTAAFEAVHYLY
QAGHQRIACIAGPEHMHLSQYRLQGYIQALRRNGILIDNQYIFRGDFTYETGINGLIALM
QHPQPPSAIFCHSDLMALGVLAQARKMGLDIPRDLSIIGFDDIEQAQYSWPPLTSVAQPR
YQIGREAMLLLLEQLQGNTVQSGSRLLSSELVIRDSVAAPNYARNRL
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
ttgaagcagaagaaaggcgtcaccacggcgacgatgaaagacgtggcggatgaggcgggt
gtttccaccgctaccgtatcccgaacgttaatgaacccagagaaagtctctgcgaccacc
cgtaggaaggtcgagcaggctgtcatcgccgttggctattcgccccacgcgctcaacaga
aatctcaagcgtaacgaatcgcgcacgatcctgacgatcgtcccggatatctgcgatccc
tacttctccgaaatatttcgcgggatcgaggaaacggcagccgaacacggctatctggtg
ttgattggcgattgcgctcaccagcatcagaaagaaaaaaccttcgtcgacctgattatt
accaagcagatcgacggcatgctgttactcggctccaatctgccgtttgacgcaagccag
gaagaacagcgtaatctgccgccgatggtgatggcgaatgagttctcaccggatctggcg
ctgcccaccgtgcatatcgataacctgaccgccgcctttgaagccgtacattatctgtat
caggcaggtcatcagcgcatcgcctgcattgcgggtccagaacacatgcacctgagccaa
taccgtttgcaagggtacattcaggccttgcgccgcaacggaattctgatcgataaccag
tacatctttcggggcgatttcacctatgaaaccgggattaacggcctgattgcgctgatg
caacatccgcagccacccagcgcaatcttctgtcacagtgacctcatggcactgggcgtg
ctggcgcaggccagaaagatgggactggacatcccacgcgatctctccattatcggtttc
gatgatatcgaacaggcgcaatacagttggcctcccctgacttctgtcgcgcagcctcgc
tatcaaatcggacgcgaggcaatgctgctactcttagagcagttgcaaggtaacacggta
caaagtggttcgcgtctgttgtccagtgagttggtcatacgcgacagcgtcgccgccccg
aattacgcccgtaacaggctttaa
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