Pectobacterium odoriferum: BCS7_20865
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Entry
BCS7_20865 CDS
T03424
Name
(GenBank) hemagglutinin
KO
K15125
filamentous hemagglutinin
Organism
pcv
Pectobacterium odoriferum
Brite
KEGG Orthology (KO) [BR:
pcv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pcv00536
]
BCS7_20865
Glycosaminoglycan binding proteins [BR:
pcv00536
]
Heparan sulfate / Heparin
Microbial pathogens
BCS7_20865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF637
TPS
Toxin-deaminase
NAD1
SNAD4
Fil_haemagg_2
Motif
Other DBs
NCBI-ProteinID:
AIU90235
LinkDB
All DBs
Position
4739953..4745253
Genome browser
AA seq
1766 aa
AA seq
DB search
MEKFNNRATRGLSYLLIYLTAIQPLHPAFAALTPDGPRTQVNNAGAVPVINIATPNAAGV
SHNTYKDFSVGTPGAVLNNSIAAGQSQLAGQLNANANLNGKAADLIINEVTGSTRSDLQG
KIEVFGNKANVLIANPNGITCDGCGFINTPSATLTTGKPVLDQQGALEALEVKKGSITIG
GKGLDGSATDYVDILSRATELNGKINAKNLTLTQGSNRVDFKTGTIVPIAGEGAKPLLAV
DTKALGGMYAERIRLVATEDGVGANIANLTSSQQGITLDSKGKIQLGNVHAKTDLNLNAQ
QVDIAAGNTVKSDRDITLASTVLNNQGNIIAGEDMRLFNDNLTNTQATIQANNNLWIQKD
ATGNKGVKVENRSGTIKTNTGDLVIRTGSLKNVRDKIVVKEKKDLTYANLNVEKELPLRA
LSDATTYIPSIAKKEIEGEFTTLTPEAEIHGGKNLYINATQLENNASSLKSFGNIFLTGQ
TFLNISPLFKQTEHITNFRSETAQEQSVRRSNTSQSASTTFLDDGMPLILAYYKVKDKES
AFKGEQLLSAKVHATENVVADFKQIIDIFRTKELTSQASSIFTSLEKINIKGRNVLLQAG
SMNINGTIESDSDTNLISQTLTNIKNAHILSKENDINISSGISILSRTSLLRARNINITS
RESDIVYETDSSTLFSDSGNRQYASLQAEETLSLNAGGNMNLSGVNFSNNKSTEFIAGKD
ISITNSIYDLTTHQRRIETTQQNNQKIFENAFFKLNYLFSNGNILAKAKGNLTLSGVSLT
AAKGIDLIANGMITIDAKTVGNIYSEFLPSTRTPSLSSRLNTGGDLLINAGNTINIKSAN
LSANNITLLAGNTISLLSTAYSAIAEPDEDNRDDRHVTTQINARKNLTLATNGDLIASGS
SLTSTGDMTLSSNGKVELNALQNHSVREGDKEFNESITQQNVVLNSGGVLTLLSSSSILF
QATSLLAKGAMDVAAKGGFLYAQAMEETNHYEKESSSRTWYGKKKKGKQTYHNVSQKVTE
FTAGSDINLLSRDDSIYEASIIEAGKNAKLTSTQGKVIFKAVKNTTFEQTITTSKGFFIK
NSDRGYTKDTWLLPSIHAGGQFTVDAATGVSAAVKTRNAQSLQNALLILSNTPGATWLKG
LNTRKDVQWNTVQDAYSSWNHTTQSLNPVVGAVIAIAVAAVTAGTGLAATAGQLAAGAVG
TGASATTVAVVSGAAYSGMTALTSQAAVALVDNKGNLSKTFQAMSSSDSVKSLVTSMVIG
GALAGFDEVMQFSQATNGTTVIDPAKAKLPMLSNGDWSKVAQRVAGQSVISSSLGTAING
GSFKDNFTTALLSNIGSQINAEGAKFIGDNGSVLDVPGKALSHAVISGIAAEISGGNVKG
AAAGALAAELAGIIINDNLVKSEGWQEKQAQISRFAGAVMGAVATGKASGVNSGANAAEI
VERFNRQLHLDEIQAIKEIAKGDKEKEMRLLAASCRKVNCVAQESLNSEERQQYETLMAL
YPATREEDGILANYWVQKDRQRTSNYPLYVGYDMEQLFTYTTGDSISDGQMFARNQWIEN
FSQMTGWSKDTVETLGFGISIASTFAGIGKAGVGNQYLSKSLVTPTAGWKSYLINEKTIQ
QAAGFRQQIIDLRATLPRNPRTSGNVAIAEINILGMPKTLAGHSRIDKAEQGFVGSGKQN
FTYQVIENSEGTKISRNTDSEYKILDNLADRLGSNISAKGSVTIFTERAACESCLGVIDQ
FKQKYPNIEINVLDNNGIILKPGGRK
NT seq
5301 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaattcaataaccgcgccacacgcggacttagctacctgctgatctatctgacc
gcgatccagcccttacaccctgcattcgcggcgctcacgccagacggcccacgcacgcag
gtcaacaacgcgggtgccgtcccggtcatcaatatcgcgacaccaaacgcagcaggtgtt
tctcacaatacctataaagatttcagcgtcgggacacccggtgccgtgctaaataacagc
attgcggcaggtcaatcgcagttggcaggacagttaaacgctaacgccaacctcaatggc
aaagcggccgatctgattatcaacgaggtgacgggctccacccgctcagacctgcaaggg
aagatagaagtcttcgggaataaagccaacgtattgattgctaacccgaacggcatcacc
tgtgacggttgtgggttcatcaacacgccttcagccacgctgacgacagggaaaccggtg
ttagatcagcaaggcgcacttgaagcgttggaagtgaaaaaaggcagcatcaccattggt
ggaaaaggcctggacggttcagcaacggattatgtcgatatcctcagccgggcaaccgaa
ctgaacggcaaaatcaacgcgaaaaacctgacgctaactcaaggcagcaatcgggtcgat
ttcaaaaccggcacgatcgttcctatcgccggagaaggtgcaaaaccactactggcagtc
gacaccaaagcgcttggcggcatgtacgctgaacgtatccgactcgtggcaaccgaagac
ggcgttggcgctaacatcgctaacctgaccagttctcaacagggcattacgctagacagc
aaaggtaaaatccaactcggtaatgttcacgcgaaaaccgatcttaatctgaatgcacag
caggtcgatattgccgcaggcaatacggtgaaaagcgatcgtgatatcacgcttgccagt
accgtattgaataaccaagggaatattatagcaggcgaagatatgcgcctgttcaacgat
aacctgaccaacacgcaggccaccattcaggccaacaacaatctgtggatccaaaaagac
gcgacgggaaacaaaggcgttaaggtcgaaaaccgttcggggacgattaaaaccaatacc
ggggatttggtgattcggacgggttcacttaaaaacgtcagagataagatcgttgtaaaa
gagaagaaggacttaacttacgccaaccttaatgttgagaaggaattaccgcttcgcgca
ctttccgatgcgacaacgtatatcccatctattgctaaaaaagagattgagggggaattt
accaccttaacacctgaagctgaaattcatggcggaaaaaatctctatattaatgcgact
caactggaaaataacgccagtagtttaaaatcctttggtaatatatttctgactgggcaa
acatttttaaatatttcccccttgtttaagcaaactgagcatataacgaattttcgttcg
gaaaccgcacaggagcagtctgtcagacgctcaaatacgtcacaatccgccagtacaacc
ttccttgatgatggcatgccactaattcttgcttattataaggtcaaagataaagagagt
gccttcaaaggcgaacagctgttatcggcaaaggtacatgcaactgagaatgtggttgca
gattttaaacagattattgatatattcagaaccaaagaactaacatctcaagcatcatca
atatttacatcattggaaaaaataaacattaaagggagaaatgtattattacaagctgga
tcgatgaatattaatggcacaatagaatctgatagcgacacaaacttgatatcacaaact
ttgacaaatattaaaaatgctcacattttatcaaaagaaaatgatataaacattagctca
gggatatctatattatcgagaacttcattattaagagcaagaaacataaacattaccagt
cgtgaaagtgatatcgtatacgaaactgattcatcaactctatttagtgattccggaaat
cgccaatatgcttcactccaggcagaggagaccctttctctaaatgcaggaggaaatatg
aacctatcaggagttaattttagtaataacaaaagcacagagtttattgcaggaaaagac
attagtatcactaattctatttatgatctcaccacccaccagcgaagaatagaaaccaca
cagcagaataatcaaaaaatatttgaaaatgcatttttcaaactaaattatttattctca
aacggtaatattcttgccaaggcaaaaggtaatcttaccttatcgggcgtatctcttact
gccgcaaaaggtattgatctaattgccaatggaatgataaccattgacgctaaaaccgta
ggtaatatctacagcgaatttttaccgtctacacgcacaccttcattatcaagccgactt
aatacgggtggggatttactgataaatgcaggaaatacaattaatattaaatcagcaaat
ttatctgccaacaacattactctcctcgcaggcaacacaatttcattactttcaacggca
tattctgcgattgccgaaccagatgaagataatagagatgaccgccatgttactactcag
attaatgcgcgaaaaaatcttactcttgccacaaacggcgatcttattgcatccggcagt
tcattaacgtcaacaggggatatgaccttaagcagcaatggtaaagtggaactcaatgca
ctacagaatcattcagtgcgagaaggtgataaagagtttaatgaatcgataacacaacaa
aatgtcgtattaaacagcggtggtgtactgacacttttatctagcagtagcatcttattt
caggctacgagtttacttgcaaaaggtgcaatggatgtggccgctaaagggggattcctg
tacgcacaagccatggaggaaaccaatcactatgaaaaagaatccagcagtcgcacctgg
tatggcaaaaagaaaaagggtaagcagacttaccataatgttagccaaaaggtgactgag
tttaccgctggaagtgatatcaacctattaagtcgtgatgacagtatctatgaagccagc
ataattgaagctggcaaaaacgctaaacttaccagcactcaaggcaaggtcatctttaag
gcggtaaaaaacaccacgtttgagcagactatcaccacatcgaaaggcttcttcattaaa
aattccgacaggggatacaccaaagatacctggctattgccatcaatccacgcgggtgga
cagtttaccgttgatgcagcgacaggagtttccgctgccgtaaaaacacgcaatgctcaa
tcgctgcaaaatgcattactgattctcagcaatactccaggggcgacgtggctgaaaggg
ttaaatacccgtaaagatgtgcaatggaacacagtacaagatgcctatagtagttggaac
catacgactcagagtttaaacccagtggtcggtgcagtaattgcaatcgctgttgcggcg
gtaaccgcaggcacaggactggcagcaacggcaggtcagttggctgctggtgctgtggga
actggggccagcgcgacaacagtcgctgtcgtaagcggcgcagcctattcaggcatgaca
gcgctgacctcgcaggcggcagttgcactggttgataacaaaggcaacctgtctaaaacg
ttccaggccatgagcagcagcgattctgtcaaatcactggttacctcaatggtgatcggc
ggtgcattagcaggcttcgatgaagtcatgcagtttagtcaggcaactaacggtacaacc
gttatcgatcccgccaaggctaaactgcccatgctcagcaacggtgactggagcaaagtc
gcgcaacgggttgccggacaatcagtgatcagctccagcctcggcaccgcgattaacggc
ggtagcttcaaagataatttcaccaccgcgctcctaagtaatatcggcagccaaattaac
gctgaaggggcgaagtttataggggataacggctctgtccttgatgtgccgggcaaagca
ctcagccatgctgtcatctcgggcatagcggctgaaatcagcggtggtaacgtcaaaggc
gctgcggcaggcgcactggcagcagagctggctggcataattattaacgataaccttgta
aaatcagaaggatggcaagaaaagcaagctcaaattagtcgtttcgcgggtgcagttatg
ggagcagtagccacaggcaaagccagtggcgtcaatagcggtgcaaacgccgctgaaatt
gttgaacgctttaatcgacaattacaccttgatgaaattcaagccatcaaagagattgcc
aaaggtgacaaagagaaggaaatgcgcctgttggcagcatcctgccgcaaagttaactgt
gtggcacaggaatcattaaattcagaagaacgccagcaatatgaaacgttgatggcactg
tacccagcaacacgcgaagaagatggaatactcgccaattattgggtacagaaagatcgg
caacgtacaagcaattacccgctttatgttggctatgacatggaacagctgtttacctat
actacaggcgacagcatttctgatggtcagatgtttgccagaaaccaatggattgaaaat
tttagccagatgacgggctggtctaaggacacagtagaaactttaggttttggtatttcg
atagcgagtacattcgcaggcataggcaaggcaggcgtcggtaatcaatacctgtcaaaa
agcctcgtgacgccaaccgcgggctggaaaagctatctgattaatgagaagaccatacag
caagcggctggctttaggcagcagattatagatttgagagcaacattacctcgcaatcct
agaactagtggaaatgtagctatcgcagaaattaatatactagggatgccgaaaacctta
gcagggcatagccgtatagacaaagctgagcagggttttgtcggctcaggaaaacagaat
ttcacctatcaggtgatagagaacagtgagggcacaaagatatcgagaaatactgattca
gaatacaaaatactagataatttagccgatagattaggaagcaatatctcagcaaaaggc
agtgtaaccatattcacagaacgggcagcctgtgaaagttgtctaggtgtcattgaccaa
tttaagcaaaaatatcctaatatagaaataaatgtattagataacaatggaattatattg
aaaccaggaggaagaaagtga
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integrated database retrieval system
