KEGG   Pectobacterium odoriferum: BCS7_21560
Entry
BCS7_21560        CDS       T03424                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
pcv  Pectobacterium odoriferum
Pathway
pcv03030  DNA replication
pcv03410  Base excision repair
pcv03420  Nucleotide excision repair
pcv03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pcv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BCS7_21560
   03410 Base excision repair
    BCS7_21560
   03420 Nucleotide excision repair
    BCS7_21560
   03440 Homologous recombination
    BCS7_21560
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pcv03032]
    BCS7_21560
   03400 DNA repair and recombination proteins [BR:pcv03400]
    BCS7_21560
Enzymes [BR:pcv01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     BCS7_21560
DNA replication proteins [BR:pcv03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     BCS7_21560
DNA repair and recombination proteins [BR:pcv03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     BCS7_21560
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BCS7_21560
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1 HHH Prok-E2_E HHH_5
Other DBs
NCBI-ProteinID: AIU90357
LinkDB
Position
4899648..4902437
AA seq 929 aa
MAQIAENPLILVDGSSYLYRAYHAFPPLTNSAGEATGAMYGVLNMLRSLLLQYHPSHVAV
VFDAKGKTFRDELFENYKAHRPPMPDDLREQIEPLHKMVKAMGLPLLAVSGVEADDVIGT
LAVQAEKAGKSVLISTGDKDMAQLVTPSVTLINTMNNSILGPQEVCDKYGIPPELIIDFL
ALMGDASDNIPGVPGVGEKTAQALLQGLGGLDSLYANLDKIAGLSFRGAKTMAPKLEQHK
EVAYLSYQLATIKTDVELELSCDQLTVNELDVDELHRLFSRYEFKRWLSDVESGTWMQGK
KSSQPVQAVSNAVAEQNAEEDNAPTLSADGYVTILDEKTLLDWIERLKQAEVFAFDTETD
GLDTLTANLIGLSFAIKPGEAAYLPLAHDYLDAPEQLDRTKVLALFKPLLEDEKLLKIGQ
NLKFDKGVMQRYDIDLRGIAFDTMLESYVLDSVAGRHDMDSLAERYLKHKTITFEEIAGK
GKNQLTFNQIALEQAGPYAAEDADVTLHLHQKLWGKLQPHADLCQVFQTIDMPLVPVLSR
IERTGVLIDPAILAEHSKELTARLAELETQAYELAGEEFNLSSTKQLQGILYEKQKLPIL
KKTPKGAPSTNEEVLAELALDYPLPKLILEYRGLAKLKSTYTDKLPLMINPATKRVHTSY
HQAVTATGRLSSSDPNLQNIPVRNDEGRRIRQAFIAPKGYSIVAADYSQIELRIMAHLSG
DKGLLNAFANGLDIHRATASEVFSTELDKVTSEQRRSAKAINFGLIYGMSAFGLSRQLNI
PRSESQKYMNLYFERYPGVQDYMERTRQQAAEHGYVSTLDGRRLYLPDIHSRNAMARKGA
ERAAINAPMQGTAADIIKKAMIAIDDWLQKDTPKVKMIMQVHDELVFEIHDSVIEESISK
IKALMEDCMQLNVPLQVDIGTGMNWDEAH
NT seq 2790 nt   +upstreamnt  +downstreamnt
atggctcagattgcagaaaatcctttaatactggtagacggttcatcctatttgtatcgt
gcttatcacgctttcccaccgttaacaaacagcgcgggagaagccaccggtgcaatgtat
ggcgtactgaatatgctacgcagtttgctgctgcaatatcatcccagccatgttgccgtc
gtttttgatgcgaaagggaaaacgtttcgcgatgaactgttcgagaactataaggctcac
cgcccacctatgccggatgatctacgcgaacagatagagcctctgcataagatggtgaaa
gcgatggggttgccgcttctggcggtatccggcgtagaagcggacgatgtgattggcacg
ctcgcggtgcaggcggaaaaggcgggtaagtcggtactgattagtaccggcgataaagat
atggcgcagctagtgacgccaagcgtgacgctcattaataccatgaataactcgattctt
ggcccacaggaagtgtgtgataagtacggtatccctcctgagctgattatcgatttcctc
gcgctgatgggcgatgcatcggataacattcctggtgtacctggcgtgggtgaaaaaacg
gctcaagcgctattgcaagggctcggtgggctggactcgctgtatgccaatctcgataaa
attgccggactttccttccgcggtgcgaaaaccatggcgccgaagctcgagcagcacaaa
gaagtggcctacctctcttatcagctggccaccattaaaacggatgttgagctggagctt
agctgcgatcagctcaccgttaacgagctggatgtggatgagttacatcgtcttttttcc
cgttatgaatttaaacgctggttatcagatgttgaatcaggcacgtggatgcaaggtaaa
aaaagcagccagcctgttcaggctgtgagtaacgcggtggctgagcagaatgccgaagag
gacaacgcccctacgctttctgccgacggttatgtcacgattcttgatgaaaaaacgctg
ctggactggattgagcgtttaaaacaggctgaggttttcgcttttgatacggaaaccgac
ggactggatacgctcaccgccaatctgattggtttatcatttgcgattaagccaggtgaa
gcagcttatttgccgctggcgcatgactatttggatgcgccggaacagttggatcgcacc
aaggtattggccttgttcaaaccgctgctggaagatgagaagctgcttaagattggccag
aatctcaaatttgataaaggcgtgatgcagcggtatgacatcgatttacgcggcatcgcg
tttgataccatgctggaatcttacgtgctcgacagcgtggcgggccgccatgatatggat
agcctggccgaacgctatctgaagcacaaaaccattacctttgaagagatcgcaggtaaa
ggcaaaaatcagctgacgtttaatcagatcgcgctggaacaggctgggccttatgccgcc
gaggacgcggacgttacgctgcatctgcaccagaagctctggggaaaactccagccgcat
gccgatctgtgccaagtcttccagactatcgatatgccgctggtgccggttttatcccgc
attgagcgtacgggcgtgcttatcgatcccgctattctggcagaacactcaaaagagctc
acagcccgtctggcggagctggaaacacaagcgtatgaactggcgggtgaagagttcaat
ctctcatcgaccaagcagctacagggcattctgtatgaaaagcaaaagctgccgattctg
aagaaaacgccaaaaggcgcgccatcaaccaatgaggaagtgttggctgaactggcgctg
gattaccctctgccgaagctgatcctggaatatcgtggcttagccaagctgaaatctact
tacaccgataagctaccgctgatgatcaatccggcgacgaagcgtgtgcatacgtcttat
catcaggctgttactgcgactggacgtttgtcttccagcgatccgaacctgcaaaacatt
ccggtgcgtaatgatgaaggacgccgtatccgtcaggcattcattgcgcctaagggctac
agcattgttgcggctgactactcgcaaatcgaactgcgtatcatggcgcacttatcgggt
gataaagggttgttgaacgcattcgcgaacgggctggatatccaccgagcaacggcgtca
gaagtgtttagcaccgagctggataaggtgacatcagaacagcgtcgcagtgcgaaagcg
atcaactttggtctgatctatggcatgagcgcgtttggcttgtcgcgtcagttgaatatt
ccccgtagcgaatcgcagaaatacatgaacctgtattttgagcgttatcccggtgtgcag
gattacatggagcgtacacgccaacaggccgcggaacatggctatgtgtccacgcttgac
ggtcgccgtctctatctgcctgatatccattctcgtaatgcgatggcgcgtaaaggcgcg
gaacgtgcggcgattaacgccccaatgcagggcactgctgctgatattattaagaaagcg
atgatcgcgattgacgattggctacagaaagacacgccgaaggtgaagatgatcatgcag
gttcacgatgaattggttttcgagattcatgattcggttattgaagaatccattagtaaa
atcaaagcattaatggaagattgtatgcaattgaatgttccgttacaggtagacatcggt
acgggcatgaactgggatgaagcacattaa

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