Phascolarctos cinereus (koala): 110192273
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Entry
110192273 CDS
T05867
Symbol
SLC6A4
Name
(RefSeq) sodium-dependent serotonin transporter isoform X1
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
pcw
Phascolarctos cinereus (koala)
Pathway
pcw04082
Neuroactive ligand signaling
pcw04721
Synaptic vesicle cycle
pcw04726
Serotonergic synapse
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
110192273 (SLC6A4)
09150 Organismal Systems
09156 Nervous system
04726 Serotonergic synapse
110192273 (SLC6A4)
04721 Synaptic vesicle cycle
110192273 (SLC6A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcw02000
]
110192273 (SLC6A4)
Transporters [BR:
pcw02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
110192273 (SLC6A4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF
5HT_transport_N
Motif
Other DBs
NCBI-GeneID:
110192273
NCBI-ProteinID:
XP_020819000
UniProt:
A0A6P5I9Q1
LinkDB
All DBs
Position
Unknown
AA seq
630 aa
AA seq
DB search
METTPLNSKNGQSACKDGEDCQENGILQKGLAGPGNKAEAGQISNGYSAVQSPGMEGDTR
NSIPADNTTLGTEGHQGERETWTKKMDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLIP
YTIMAIFGGIPLFYMELALGQYHRNGCISIWKKICPIFKGIGFAICIIAFYIASYYNTIM
AWALYYLISSFTGQLPWTSCKNSWNTDNCTNYFSEDNITWTSHSISPAEEFYTRHVLQVH
QSRGLDDVGGISWQLALCTMSIFTIVYFSIWKGVRSSGKVVWVTATFPYIILSILLVRGA
TLPGAWRGVVFYLKPNWQKLLETGVWVDAAAQIFFSLGPGFGVLLAYASYNKFNNNCYQD
ALVTSIVNCMTSFMSGFVIFTVLGYMAEMRNEDVSEVAKDIGPSLLFITYPEAIANMPAA
TFFAIIFFIMIITLGLDSTFAGLEGVITAVLDEFPHVWAKRREWFVLAVVITCFFGSLST
LTFGGAYVVKLLEEYATGPAVLTVALLEAIAVSWFYGINQFCSDVKEMVGFSPGWFWRIC
WVAISPIFLLFIICSFLSSPPELRLFNYNYPRWTVLLGYCIGTSSFICIPAYIIYRLIIT
PGTFKERILKSITPETPTEIPFGDLRLNAV
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggagaccacccctctgaattctaagaatgggcagtcagcctgcaaggatggagaagac
tgccaggaaaatggcattctgcagaaaggactcgctggcccagggaacaaggcagaagca
ggacaaatctcaaatgggtactcagctgtgcagagtccaggtatggaaggggacacccgc
aactccatcccagcagacaacaccaccctaggcaccgaaggtcaccaaggggagcgagag
acctggaccaaaaagatggacttcctcctctcggtcattggctatgctgtggaccttggc
aatgtgtggcgcttcccatatatatgctaccaaaatggaggaggggccttccttataccc
tacaccatcatggccatttttggtgggattcctctgttctatatggagctagctctgggc
cagtatcatcgaaatggctgcatttcaatatggaagaaaatttgccccattttcaaaggg
attggctttgccatttgcatcattgccttttacatcgcctcctactataacaccatcatg
gcctgggctctctactacctcatctcttccttcacgggtcaactgccctggaccagctgc
aagaactcctggaacaccgacaattgtaccaactacttctcagaagacaacatcacctgg
acttcccactccatatcacctgctgaagaattttatacgcgccatgttttacaggtccac
cagtctcgaggactagatgatgtgggaggcattagctggcagctggccctctgcacaatg
tcgatcttcactattgtctacttcagcatctggaaaggggtcagatcatctggcaaggtg
gtgtgggtgacagctactttcccttatattatcctgtccatcctgcttgtaaggggggcc
acgcttccaggagcctggagaggtgtcgttttctacctgaaacccaattggcagaagctc
cttgaaactggggtctgggtggatgccgcagctcagattttcttctcgttgggtcctggc
tttggtgtcttactagcttatgctagctataacaaattcaataacaactgttaccaagat
gccctggtgaccagcattgtgaactgcatgacaagcttcatgtctggatttgtcatcttc
accgtgcttggctacatggcggagatgaggaatgaagacgtgtccgaagtggctaaagat
atagggcccagcctccttttcatcacatacccggaagccatcgccaacatgccggccgcc
accttctttgctatcattttcttcataatgataatcactctgggcttagacagcacgttt
gcaggacttgagggtgtgatcacggcggtgctggatgaattcccacacgtctgggccaaa
cgccgggagtggtttgtgcttgctgtggtcattacctgtttttttggatctctttccacc
ttgacttttggaggggcctatgtggtgaagttgctggaggaatacgccactggaccggcg
gttctcacagtggcgctgttggaagcaatcgccgtgtcttggttctatggtatcaaccag
ttctgcagtgacgtgaaagaaatggttggtttcagccctggttggttttggaggatctgc
tgggtagcaatcagcccaatatttctgctgttcatcatctgcagctttctgagcagccct
ccagagctaaggctcttcaattacaattaccctcgctggaccgtcctcctgggatattgc
attgggacttcttccttcatctgcattcctgcctatataatttatcggttgatcatcact
ccagggacattcaaagagcgtattcttaaaagtatcactccagaaacacctacagagatt
ccctttggagatcttcgcttgaatgctgtgtag
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