KEGG   Phascolarctos cinereus (koala): 110192835
Entry
110192835         CDS       T05867                                 
Symbol
TCOF1
Name
(RefSeq) treacle protein isoform X1
  KO
K14562  Treacher Collins syndrome protein
Organism
pcw  Phascolarctos cinereus (koala)
Pathway
pcw03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:pcw00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    110192835 (TCOF1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pcw03009]
    110192835 (TCOF1)
Ribosome biogenesis [BR:pcw03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    110192835 (TCOF1)
SSDB
Motif
Pfam: Treacle
Other DBs
NCBI-GeneID: 110192835
NCBI-ProteinID: XP_020819887
UniProt: A0A6P5ICG1
LinkDB
Position
Unknown
AA seq 1809 aa
MTEAQKRRELLPLIHHHLVQAGYVRAAREVKLQSAQKTFPAPSVTLLDIYTHWQQTSEVA
KKRKAEEADGEIPCKVRVSDPTSSSESSEEEKEQQERGEKTVKTTKVLSSNSVSVIKGMQ
CKNSLSEPKENVKTKNKKGTIKTVVTSASHPDPLEAQTTSGKPGPTVSVQSPSKKSPAAP
RKQAAQSSSNSLATHSEEKVASPVVPRPAPVPPDKKTESSSEDSSTDETDIEMEKAVGTP
QGKSALVRGDSAASVPTKGSQKKMITPSPGRLVTEPLTAKEKRPEETSESSDESESDEDV
PTPQGQTQVKTLHLGEVPGRVGKTTPNTGKTVTPSSRPNLGLPSKAEESSESSEESESEE
EDTEPQRHQVKTTPASGIKVSPWQGALPVPGKSVTSNLQVKAAEPRSQETSSESSDEDVS
APQGQGKSSTKTPQANAMSGNRAPAPSNITKVPLGKGALQAKIGPSARTPEFSFPETSSD
SSEESESEEDIIVPQRQEKLSEKTPQANATPVKGTLLAVGKPMTSAPQARTGPSAPQAKP
GPSAPPARTGPSAMVSEPGSSETSSESSEESDSEEEIKAPQEKGKSAMKVSQINAITTKV
APAPTQRPLGKEALSAPGKSGTVASEVKAQSAAETLGSESSESSEESESEEETPTLQTQV
NPPGKTLTKAIPAPPTKSPLEKGALHTPGGTVSAPASARVTPAAKGVRPGGSEESAESSE
ESESEVETPVSQGQAISVKNLQVKTSPASATKGPLGKGVLPAPGKLVTAASNAKGTSLTK
AVGPGKPEESSESSEETDSEVEVPLSQGQAKLAAKAPQINTSLQKSATVIPISSKGIQGR
VSAPAPWKSGPAPLQAKVAGPGKPKATSESSEESESEEESPASRGQAKPTVKAPQVDAPP
GKGAPVTPVSAKGTRGKVSAPAPWKSGPAPLQAKAAGPGRPKATSESSEESESEEESPAS
RGQAKPTVKAPQVDAPPGKGAPVTPVSAKGTRGKVSAPAPWKSGPAPLQAKAAGPGRPKA
TSESSEESESEEESPASRGQAKPVVKPGQADTPSGKGTSISPVSLKGSQGKAPTPSPLKS
GNAPLQTKEEVQVKAACLGKAEETSEEDSEWEDSISVSQGQVKPAIAVSPGLEGGKGTTI
SSPKKSAVASLQAIKVDSSSSDDSSSSSDDTLIPASQRQVKPSVPAPQGKAAEKPAVPLT
TVEETSSSESMEDTESEEEEVPTPQGQVKTAVKNTHVNPASGRESKDTPASGKSVSSSKT
TITGPIKPEEHSESSEESESEDEVKPSVKTPQVTAASIRKKEPTPALGKSVAPSPQTQVG
PQAKVIGTAVSEESSDTSDESESEGVIPVSQEQVSSGKTDEKAAAAKNSVGKVSAASSDK
QLASPGATRSQKSKSSNGEPPAAQTTCVMKSKTAKQDKKSKLAGGTQATPAQDSFSVTTS
NGTKSEKEDSDIVKAKQTQNLGPSPKGKATVNTESPEDSSEEEMIEPSQSVLSGYAFPSS
SLPVSINPQLQKAPPKQRLAAIASAGPALPVSYKGSPQSDSSDSEVECKTESEEQPPQTG
KKLKTSVSRHQSIGKGFKSGAVDCKPASPKHGISCQSPVKSMDPSNLPSLIRLQISSADE
NSELNNASLNSKASGIRMLSDLLKLEKKNKSTESSKSGKGSKKSKSKRKLTEDSPVAKAP
KSKKKKLMSEVPKEGETLQEKTIGTTKVGKKEKASGDAKEKKPKGVHSSKKNKEKPQGNI
TVTVGESGKTLGPKTKKEKKQKKKSDKKKKSKDKKDKKKKKQSISKNPDPASVSLKKEKK
KKKKVKQID
NT seq 5430 nt   +upstreamnt  +downstreamnt
atgactgaagcccagaagcggcgggagctgctcccgctcatccaccaccatctggtgcag
gctggctacgtgagggcggcgcgggaggtgaagctgcagagcgcccagaaaactttccca
gcaccgtcagtgacccttctggacatctatacccactggcaacaaacttcagaagttgct
aagaaacgcaaggcagaagaagcagatggagagattccctgtaaggtcagagtgtctgat
cccacaagcagctctgagagctcagaggaggagaaggaacagcaagagagaggggagaaa
acagtgaaaactaccaaagtgctatcctccaactctgtgtctgtgataaagggcatgcaa
tgcaagaattcactgtcagaacctaaggagaatgtcaagacaaagaataagaaaggaacc
attaagaccgtggtgacctctgcctcacaccctgacccccttgaagcacagaccacctct
ggaaagccaggtccaaccgtgtcagtacagtccccttccaaaaagtccccagcagccccc
agaaagcaggcagcacagtcttcgagcaatagcttggccacacacagtgaggaaaaggtt
gcttcccctgttgttccaagacctgccccagtgcctccagacaagaagacagagagcagc
agcgaggactcctcaactgatgagacagatatagagatggagaaagcagtgggaactccc
cagggcaagtctgccctggtgagaggtgactctgctgcctcagttcccaccaaggggtcc
cagaagaaaatgatcacaccatctcctgggagattggtgactgagcctctgacagccaag
gagaagcgaccagaagagacctctgagagcagtgatgaatctgagagtgatgaggatgtc
ccaacacctcagggacagacacaagtgaaaacgcttcatcttggtgaagtaccagggagg
gtaggcaagaccactccaaacacggggaaaactgtcactccatcctccagaccaaatttg
ggactgccctccaaggcagaggagagctcagagagcagcgaggagtcagaaagtgaagag
gaggatacagagcctcagagacaccaggttaaaaccaccccagcctctggtatcaaagta
tccccatggcaaggggcccttcctgttcctggtaagtcagtgacttcgaacctccaggtc
aaggcagcagagcccagaagtcaagagactagttctgagagcagtgatgaagacgtctca
gcgccacagggacagggaaaatcatccacgaagactccccaggccaatgccatgtcagga
aatagagcccctgccccctcaaacatcactaaagtgcccctgggaaaaggggccctccag
gccaagataggaccctcagccaggacacctgaatttagttttccagagactagttctgat
agcagtgaggagtccgagagtgaagaggatatcatagtgccccagagacaggaaaaatta
tcagagaagactccccaagccaatgctacaccagtgaaagggacccttcttgctgttgga
aaaccaatgacttcagccccccaggccaggacagggccttcagccccccaggccaagccg
gggccttcagcccccccggccaggacagggccgtcagccatggtatctgaacctggaagt
tcagagactagttctgagagcagtgaggagtcagacagtgaagaggagatcaaagcacct
caggaaaagggaaaatcagcaatgaaagtttcccagattaatgccattacaacaaaagtt
gctcctgcccccacccaaaggcccctggggaaagaggccctttctgcccctggaaaatca
gggactgtggcttctgaggtcaaggcacaatcagctgctgaaacccttgggtcagagagc
tctgagagcagcgaggagtcagaaagtgaagaggaaacccccacactccaaacccaggtg
aatcctccagggaaaactctaaccaaagccatccctgccccacccactaaaagcccttta
gagaagggggctcttcacactcctgggggaacagtgagtgcacctgccagtgccagggtg
acacctgcagccaaaggagtgagacccggggggtcagaggagagtgctgagagtagtgaa
gagtctgaaagcgaagtggaaactcctgtgtcccagggacaggcaatatcagtgaaaaat
cttcaggtcaaaacctcgccagcatctgctaccaaggggcccctggggaagggagttctt
cccgctccagggaagttagtgactgcagcttccaatgccaaggggacatctctgaccaag
gcagttgggcctgggaaaccagaggagagttctgagagctctgaggaaacagacagtgag
gttgaggtacctctgtcccaaggacaggcaaagctggcagcgaaagctcctcaaatcaac
acctccttacagaaatcagccactgtcatccccatctcctctaagggcattcaggggaga
gtgtctgctccagctccctggaagtcagggcctgcgcccctccaggccaaagtagcagga
cctgggaaacccaaggccacttctgaaagcagtgaggagtcagagagtgaggaggagagc
ccagcatcccggggacaggcaaagcccacagtgaaagctccccaagttgatgcccctcca
ggaaaaggggcccctgtcactcctgtctctgctaagggcactcgggggaaagtgtctgct
ccagctccctggaagtcagggcctgcgcccctccaggccaaagcagcaggacctgggaga
cccaaggccacttctgaaagcagtgaggagtcagagagtgaggaggagagcccagcatcc
cggggacaggcaaagcccacagtgaaagctccccaagttgatgcccctccaggaaaaggg
gcccctgtcactcctgtctctgctaagggcactcgggggaaagtgtctgctccagctccc
tggaagtcagggcctgcgcccctccaggccaaagcagcaggacctgggagacccaaggcc
acttctgaaagcagtgaggagtcagagagtgaggaggagagcccagcatcccggggacag
gcaaagccagtagtgaaacctggccaggctgacaccccatcagggaaagggacctccatc
tccccagtgtccctcaagggctcccaggggaaagcgcctactccatcccccttaaaatca
ggaaatgcacctctccagaccaaagaagaggtccaagtcaaggcagcatgtcttgggaaa
gcagaagagacttcagaagaggattcagagtgggaagacagcatctcggtatctcagggc
caggtaaaacccgcaatcgcagtttctccaggtttggaaggagggaaggggaccaccata
tcatctcctaagaagtcagcagttgcctcccttcaggccatcaaggtggattccagcagc
tcagatgacagctctagcagcagcgatgacacgttgatccctgcatcccaaagacaggtg
aaaccatctgtcccagccccccagggcaaagctgctgagaagccagcagtccccctcacc
acagtggaggagacgtcatcatcggagagcatggaggacacagagagtgaagaagaggaa
gtcccaactcctcaggggcaggtaaaaactgcagtgaaaaatactcatgtcaatccagcc
tcaggaagagagagcaaggacacaccagcctcaggaaagtccgtgtcttcatcaaagacc
acaataacagggcctataaagccagaagaacattctgaaagcagcgaggaatccgaaagt
gaagatgaggtaaaaccttcagtgaaaactcctcaggtcactgcagcctcaataagaaag
aaagagcccacaccagcccttgggaagtctgtggctccatccccccaaactcaggtgggg
cctcaggccaaggtcattggaactgcagtatcagaggagagttccgacaccagtgatgag
tctgagagtgaaggggtgatccctgtgtcccaggagcaggtttcatcagggaagacagat
gagaaggctgcagctgctaagaacagtgtggggaaagtgtctgccgcatcttcagacaag
cagttggcttcacctggtgctaccaggagccagaaatccaaaagtagcaatggagagccg
ccagctgcccagaccacttgtgtgatgaagagcaaaacagctaagcaggacaagaaatct
aagcttgctggggggacccaagccacgcctgctcaggacagcttttctgtgaccactagt
aatggtacaaagagtgagaaagaagactcagacatagtcaaagcaaagcagacacaaaat
ctaggtccttcccctaagggcaaagccactgtgaatacagagagcccagaggattccagc
gaagaggaaatgatagagccttcccagtctgtcctttcaggttatgcatttcccagttca
tctctccctgtatccataaaccctcagctacagaaggcacctcccaagcaaagacttgca
gcgattgcctctgcaggcccagctctgccagtgtcttacaaaggaagtcctcagagtgac
agcagtgattctgaggtagagtgcaagacagaatcagaagagcagcctccccagactggg
aaaaaattgaagacctcagtctccaggcatcagtcgattggaaaggggttcaagtcaggc
gcagtcgattgtaaacctgcctcacccaaacatgggatcagctgtcagagtcccgtaaag
tctatggatccttccaacctcccttctctaattcggctacagatctcaagtgctgatgag
aactcagagcttaacaatgcatctctcaactccaaggcctctggaataagaatgctcagt
gacttgctgaagctagaaaagaagaataaaagtactgaatcctcaaagtcaggcaagggg
agcaagaaatcaaaatcaaaacgaaaactgacagaagacagccctgttgctaaagccccc
aagagcaagaagaagaagttgatgagtgaggtccctaaggaaggggagactttgcaagaa
aaaaccattgggactaccaaggtggggaaaaaagagaaagcaagtggtgatgctaaagaa
aagaagccaaagggggttcatagctccaagaagaacaaagagaagccacaaggaaacatt
acagtcacagtgggagaaagtggaaaaacgctaggccccaagaccaaaaaagagaagaag
caaaagaagaaatctgacaagaagaaaaagagcaaggacaaaaaggataagaagaagaaa
aagcagtccatttccaaaaatcctgaccctgcctcagtatccctcaagaaagagaagaaa
aagaaaaagaaagttaaacaaatagattga

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