Phascolarctos cinereus (koala): 110192835
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Entry
110192835 CDS
T05867
Symbol
TCOF1
Name
(RefSeq) treacle protein isoform X1
KO
K14562
Treacher Collins syndrome protein
Organism
pcw
Phascolarctos cinereus (koala)
Pathway
pcw03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
110192835 (TCOF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcw03009
]
110192835 (TCOF1)
Ribosome biogenesis [BR:
pcw03009
]
Eukaryotic type
90S particles
Other 90S particles
110192835 (TCOF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Treacle
Motif
Other DBs
NCBI-GeneID:
110192835
NCBI-ProteinID:
XP_020819887
UniProt:
A0A6P5ICG1
LinkDB
All DBs
Position
Unknown
AA seq
1809 aa
AA seq
DB search
MTEAQKRRELLPLIHHHLVQAGYVRAAREVKLQSAQKTFPAPSVTLLDIYTHWQQTSEVA
KKRKAEEADGEIPCKVRVSDPTSSSESSEEEKEQQERGEKTVKTTKVLSSNSVSVIKGMQ
CKNSLSEPKENVKTKNKKGTIKTVVTSASHPDPLEAQTTSGKPGPTVSVQSPSKKSPAAP
RKQAAQSSSNSLATHSEEKVASPVVPRPAPVPPDKKTESSSEDSSTDETDIEMEKAVGTP
QGKSALVRGDSAASVPTKGSQKKMITPSPGRLVTEPLTAKEKRPEETSESSDESESDEDV
PTPQGQTQVKTLHLGEVPGRVGKTTPNTGKTVTPSSRPNLGLPSKAEESSESSEESESEE
EDTEPQRHQVKTTPASGIKVSPWQGALPVPGKSVTSNLQVKAAEPRSQETSSESSDEDVS
APQGQGKSSTKTPQANAMSGNRAPAPSNITKVPLGKGALQAKIGPSARTPEFSFPETSSD
SSEESESEEDIIVPQRQEKLSEKTPQANATPVKGTLLAVGKPMTSAPQARTGPSAPQAKP
GPSAPPARTGPSAMVSEPGSSETSSESSEESDSEEEIKAPQEKGKSAMKVSQINAITTKV
APAPTQRPLGKEALSAPGKSGTVASEVKAQSAAETLGSESSESSEESESEEETPTLQTQV
NPPGKTLTKAIPAPPTKSPLEKGALHTPGGTVSAPASARVTPAAKGVRPGGSEESAESSE
ESESEVETPVSQGQAISVKNLQVKTSPASATKGPLGKGVLPAPGKLVTAASNAKGTSLTK
AVGPGKPEESSESSEETDSEVEVPLSQGQAKLAAKAPQINTSLQKSATVIPISSKGIQGR
VSAPAPWKSGPAPLQAKVAGPGKPKATSESSEESESEEESPASRGQAKPTVKAPQVDAPP
GKGAPVTPVSAKGTRGKVSAPAPWKSGPAPLQAKAAGPGRPKATSESSEESESEEESPAS
RGQAKPTVKAPQVDAPPGKGAPVTPVSAKGTRGKVSAPAPWKSGPAPLQAKAAGPGRPKA
TSESSEESESEEESPASRGQAKPVVKPGQADTPSGKGTSISPVSLKGSQGKAPTPSPLKS
GNAPLQTKEEVQVKAACLGKAEETSEEDSEWEDSISVSQGQVKPAIAVSPGLEGGKGTTI
SSPKKSAVASLQAIKVDSSSSDDSSSSSDDTLIPASQRQVKPSVPAPQGKAAEKPAVPLT
TVEETSSSESMEDTESEEEEVPTPQGQVKTAVKNTHVNPASGRESKDTPASGKSVSSSKT
TITGPIKPEEHSESSEESESEDEVKPSVKTPQVTAASIRKKEPTPALGKSVAPSPQTQVG
PQAKVIGTAVSEESSDTSDESESEGVIPVSQEQVSSGKTDEKAAAAKNSVGKVSAASSDK
QLASPGATRSQKSKSSNGEPPAAQTTCVMKSKTAKQDKKSKLAGGTQATPAQDSFSVTTS
NGTKSEKEDSDIVKAKQTQNLGPSPKGKATVNTESPEDSSEEEMIEPSQSVLSGYAFPSS
SLPVSINPQLQKAPPKQRLAAIASAGPALPVSYKGSPQSDSSDSEVECKTESEEQPPQTG
KKLKTSVSRHQSIGKGFKSGAVDCKPASPKHGISCQSPVKSMDPSNLPSLIRLQISSADE
NSELNNASLNSKASGIRMLSDLLKLEKKNKSTESSKSGKGSKKSKSKRKLTEDSPVAKAP
KSKKKKLMSEVPKEGETLQEKTIGTTKVGKKEKASGDAKEKKPKGVHSSKKNKEKPQGNI
TVTVGESGKTLGPKTKKEKKQKKKSDKKKKSKDKKDKKKKKQSISKNPDPASVSLKKEKK
KKKKVKQID
NT seq
5430 nt
NT seq
+upstream
nt +downstream
nt
atgactgaagcccagaagcggcgggagctgctcccgctcatccaccaccatctggtgcag
gctggctacgtgagggcggcgcgggaggtgaagctgcagagcgcccagaaaactttccca
gcaccgtcagtgacccttctggacatctatacccactggcaacaaacttcagaagttgct
aagaaacgcaaggcagaagaagcagatggagagattccctgtaaggtcagagtgtctgat
cccacaagcagctctgagagctcagaggaggagaaggaacagcaagagagaggggagaaa
acagtgaaaactaccaaagtgctatcctccaactctgtgtctgtgataaagggcatgcaa
tgcaagaattcactgtcagaacctaaggagaatgtcaagacaaagaataagaaaggaacc
attaagaccgtggtgacctctgcctcacaccctgacccccttgaagcacagaccacctct
ggaaagccaggtccaaccgtgtcagtacagtccccttccaaaaagtccccagcagccccc
agaaagcaggcagcacagtcttcgagcaatagcttggccacacacagtgaggaaaaggtt
gcttcccctgttgttccaagacctgccccagtgcctccagacaagaagacagagagcagc
agcgaggactcctcaactgatgagacagatatagagatggagaaagcagtgggaactccc
cagggcaagtctgccctggtgagaggtgactctgctgcctcagttcccaccaaggggtcc
cagaagaaaatgatcacaccatctcctgggagattggtgactgagcctctgacagccaag
gagaagcgaccagaagagacctctgagagcagtgatgaatctgagagtgatgaggatgtc
ccaacacctcagggacagacacaagtgaaaacgcttcatcttggtgaagtaccagggagg
gtaggcaagaccactccaaacacggggaaaactgtcactccatcctccagaccaaatttg
ggactgccctccaaggcagaggagagctcagagagcagcgaggagtcagaaagtgaagag
gaggatacagagcctcagagacaccaggttaaaaccaccccagcctctggtatcaaagta
tccccatggcaaggggcccttcctgttcctggtaagtcagtgacttcgaacctccaggtc
aaggcagcagagcccagaagtcaagagactagttctgagagcagtgatgaagacgtctca
gcgccacagggacagggaaaatcatccacgaagactccccaggccaatgccatgtcagga
aatagagcccctgccccctcaaacatcactaaagtgcccctgggaaaaggggccctccag
gccaagataggaccctcagccaggacacctgaatttagttttccagagactagttctgat
agcagtgaggagtccgagagtgaagaggatatcatagtgccccagagacaggaaaaatta
tcagagaagactccccaagccaatgctacaccagtgaaagggacccttcttgctgttgga
aaaccaatgacttcagccccccaggccaggacagggccttcagccccccaggccaagccg
gggccttcagcccccccggccaggacagggccgtcagccatggtatctgaacctggaagt
tcagagactagttctgagagcagtgaggagtcagacagtgaagaggagatcaaagcacct
caggaaaagggaaaatcagcaatgaaagtttcccagattaatgccattacaacaaaagtt
gctcctgcccccacccaaaggcccctggggaaagaggccctttctgcccctggaaaatca
gggactgtggcttctgaggtcaaggcacaatcagctgctgaaacccttgggtcagagagc
tctgagagcagcgaggagtcagaaagtgaagaggaaacccccacactccaaacccaggtg
aatcctccagggaaaactctaaccaaagccatccctgccccacccactaaaagcccttta
gagaagggggctcttcacactcctgggggaacagtgagtgcacctgccagtgccagggtg
acacctgcagccaaaggagtgagacccggggggtcagaggagagtgctgagagtagtgaa
gagtctgaaagcgaagtggaaactcctgtgtcccagggacaggcaatatcagtgaaaaat
cttcaggtcaaaacctcgccagcatctgctaccaaggggcccctggggaagggagttctt
cccgctccagggaagttagtgactgcagcttccaatgccaaggggacatctctgaccaag
gcagttgggcctgggaaaccagaggagagttctgagagctctgaggaaacagacagtgag
gttgaggtacctctgtcccaaggacaggcaaagctggcagcgaaagctcctcaaatcaac
acctccttacagaaatcagccactgtcatccccatctcctctaagggcattcaggggaga
gtgtctgctccagctccctggaagtcagggcctgcgcccctccaggccaaagtagcagga
cctgggaaacccaaggccacttctgaaagcagtgaggagtcagagagtgaggaggagagc
ccagcatcccggggacaggcaaagcccacagtgaaagctccccaagttgatgcccctcca
ggaaaaggggcccctgtcactcctgtctctgctaagggcactcgggggaaagtgtctgct
ccagctccctggaagtcagggcctgcgcccctccaggccaaagcagcaggacctgggaga
cccaaggccacttctgaaagcagtgaggagtcagagagtgaggaggagagcccagcatcc
cggggacaggcaaagcccacagtgaaagctccccaagttgatgcccctccaggaaaaggg
gcccctgtcactcctgtctctgctaagggcactcgggggaaagtgtctgctccagctccc
tggaagtcagggcctgcgcccctccaggccaaagcagcaggacctgggagacccaaggcc
acttctgaaagcagtgaggagtcagagagtgaggaggagagcccagcatcccggggacag
gcaaagccagtagtgaaacctggccaggctgacaccccatcagggaaagggacctccatc
tccccagtgtccctcaagggctcccaggggaaagcgcctactccatcccccttaaaatca
ggaaatgcacctctccagaccaaagaagaggtccaagtcaaggcagcatgtcttgggaaa
gcagaagagacttcagaagaggattcagagtgggaagacagcatctcggtatctcagggc
caggtaaaacccgcaatcgcagtttctccaggtttggaaggagggaaggggaccaccata
tcatctcctaagaagtcagcagttgcctcccttcaggccatcaaggtggattccagcagc
tcagatgacagctctagcagcagcgatgacacgttgatccctgcatcccaaagacaggtg
aaaccatctgtcccagccccccagggcaaagctgctgagaagccagcagtccccctcacc
acagtggaggagacgtcatcatcggagagcatggaggacacagagagtgaagaagaggaa
gtcccaactcctcaggggcaggtaaaaactgcagtgaaaaatactcatgtcaatccagcc
tcaggaagagagagcaaggacacaccagcctcaggaaagtccgtgtcttcatcaaagacc
acaataacagggcctataaagccagaagaacattctgaaagcagcgaggaatccgaaagt
gaagatgaggtaaaaccttcagtgaaaactcctcaggtcactgcagcctcaataagaaag
aaagagcccacaccagcccttgggaagtctgtggctccatccccccaaactcaggtgggg
cctcaggccaaggtcattggaactgcagtatcagaggagagttccgacaccagtgatgag
tctgagagtgaaggggtgatccctgtgtcccaggagcaggtttcatcagggaagacagat
gagaaggctgcagctgctaagaacagtgtggggaaagtgtctgccgcatcttcagacaag
cagttggcttcacctggtgctaccaggagccagaaatccaaaagtagcaatggagagccg
ccagctgcccagaccacttgtgtgatgaagagcaaaacagctaagcaggacaagaaatct
aagcttgctggggggacccaagccacgcctgctcaggacagcttttctgtgaccactagt
aatggtacaaagagtgagaaagaagactcagacatagtcaaagcaaagcagacacaaaat
ctaggtccttcccctaagggcaaagccactgtgaatacagagagcccagaggattccagc
gaagaggaaatgatagagccttcccagtctgtcctttcaggttatgcatttcccagttca
tctctccctgtatccataaaccctcagctacagaaggcacctcccaagcaaagacttgca
gcgattgcctctgcaggcccagctctgccagtgtcttacaaaggaagtcctcagagtgac
agcagtgattctgaggtagagtgcaagacagaatcagaagagcagcctccccagactggg
aaaaaattgaagacctcagtctccaggcatcagtcgattggaaaggggttcaagtcaggc
gcagtcgattgtaaacctgcctcacccaaacatgggatcagctgtcagagtcccgtaaag
tctatggatccttccaacctcccttctctaattcggctacagatctcaagtgctgatgag
aactcagagcttaacaatgcatctctcaactccaaggcctctggaataagaatgctcagt
gacttgctgaagctagaaaagaagaataaaagtactgaatcctcaaagtcaggcaagggg
agcaagaaatcaaaatcaaaacgaaaactgacagaagacagccctgttgctaaagccccc
aagagcaagaagaagaagttgatgagtgaggtccctaaggaaggggagactttgcaagaa
aaaaccattgggactaccaaggtggggaaaaaagagaaagcaagtggtgatgctaaagaa
aagaagccaaagggggttcatagctccaagaagaacaaagagaagccacaaggaaacatt
acagtcacagtgggagaaagtggaaaaacgctaggccccaagaccaaaaaagagaagaag
caaaagaagaaatctgacaagaagaaaaagagcaaggacaaaaaggataagaagaagaaa
aagcagtccatttccaaaaatcctgaccctgcctcagtatccctcaagaaagagaagaaa
aagaaaaagaaagttaaacaaatagattga
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integrated database retrieval system