Phascolarctos cinereus (koala): 110192837
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Entry
110192837 CDS
T05867
Symbol
SYNPO
Name
(RefSeq) LOW QUALITY PROTEIN: synaptopodin
KO
K21112
synaptopodin
Organism
pcw
Phascolarctos cinereus (koala)
Pathway
pcw04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
110192837 (SYNPO)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Calsarcin
Motif
Other DBs
NCBI-GeneID:
110192837
NCBI-ProteinID:
XP_020819892
UniProt:
A0A6P5ICG5
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All DBs
Position
Unknown
AA seq
1201 aa
AA seq
DB search
MFGTQLFQPQPSGTRPTEGRSHSGDFELPEEGYNCPAMESKEDSLSTFEGPGQSSLLDLE
EKEEKVLDNVPCGMREEGSQPSSPLLTHSVSGPRQPPGRSHETCGTSQDWKVARVQAVPV
SSPSSAQKPALCRSTSFTEKDLKEAKAQSQLIAAQLTTPPSSNSRGVLLFHRRRQRVKEF
TLESFGKQGQKPGPVHSPQTFPVETPDHGPELCLNHTPQGAHPSPSSSLGIQSPEVGNPC
RNMEGHGKNTDVLSQRSLEKAASEEEEIPLVVYLKENAALLTANGLHLSQSKEAQKGPSL
ADANALTMDVNQNPSLTETTPTTLVSDVNQNPPAMDIGQNASVSSTKQNASESQVQQDTP
VADFKPSTLLVDEKTHSPSPDMSSSAAVTEVKPSIVPTNGKASPHSGEAVPSSTTNATVP
DVKSSVLVIDVKPSGPAVGLEMSGPAIGTPVPKQHSEVHLTLAKPQSVVNRTARPFGVQS
QGINSQLERSPMMERRPMGERSPRAQAHTIGERSPQVQRHTVMMRSPMVERRPLRESSPT
MERGPMVERPVMVERSPALEKRPLGNFTPPPTYAETLSTTPLASRGRSPPSYSVLYPSTE
HKQTRLKGPSYGEGRPASVAKTGILEESMARRGNRKSMFTFVEKPKVTPNPDLLDLVQTA
DEKRKQRDHGELGPEEEPFALGAEASNFQNEPPPRDWSSPTSEDTLPEWSSCLKSPSIRA
KPERKPNQNLTEATGKGAELYARRQSRMEKYVIESPGHAESARCPSPTMSLPPSWKYSNA
PGFPGGFRVASRSPARTPPASLYHGYLPENRTPRREVEPTKQQPYQLQSSLFVLTPSKEP
AKIPARAASPAKPGSLDLEPVGRLAPCPAGSVLPPSPALPRPARTSPALCPSPVGPGGLV
QDVTQMSGSSPTFGGEVSPVSPSRAWSPRAKGQAPRPSFSTRNVGIEPQERWECRPTSPP
ETPGSPRPASSLDGWGGRGPSEFCQMVTTSSPPPPPPMXPSWSEGSLSSMQAEPKGSSRQ
MQALVARNIINAARRKSSSSPRSPGAEWLRPLSATQALPPASPRGLGSPCPPLKSALGDG
YRLSSLPGGTFSPILKSPLPSSQAPFGDGPRPFLPASPRSPGTTRPLAFRSPLPSPSPQV
RSPVKPYTSRSPTDSDVSLDSEDSGLKSPGLRGYNICPRGWHGSSLRLKRGSLPSETPCT
S
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
atgtttggcactcagctgttccagcctcagccctcagggaccaggcctactgaaggaaga
tctcactctggtgactttgagcttcctgaggaaggctacaactgtccagccatggagtcc
aaagaggacagcttgagcacgtttgaaggtccaggacagtccagtcttttggacctggaa
gagaaagaagaaaaagtcttggacaatgtaccctgtggaatgagggaagaggggtcccag
ccatcaagtccgcttctaactcattcggtcagtggtcctaggcaaccgcctgggaggtct
catgagacatgtggcaccagccaggactggaaagtagccagagtgcaggctgtcccggtt
tccagccccagctcagcccagaaaccagcactgtgtcggagtaccagcttcactgagaag
gacctgaaagaggccaaagcacagagtcagctaattgccgcccagctgaccactcctccc
agctccaattcccgaggggtcctgctcttccacaggcgccggcaaagagtaaaggagttc
actttagagagctttgggaaacagggacagaaacccggccctgtgcacagccctcaaacc
ttccctgttgagactccagaccatggtccagagctctgcctgaatcacactccccaaggc
gctcatccaagcccctcttcatcccttggtatccagtccccagaggtagggaatccttgc
cgcaatatggaggggcatgggaagaacacagatgtcctgagccagagatccctggagaag
gcagccagtgaagaggaggagatccctttggtggtttacctaaaggaaaatgcagccttg
ctcaccgccaatggactccacctatctcaaagcaaggaagctcagaagggtccttcactg
gctgatgcaaatgctctcactatggatgtgaatcagaatccttccttgactgagactaca
cccaccacgctagtgagtgatgtcaaccagaacccaccggcgatggacattggtcagaac
gcatcagtctccagcaccaaacagaatgcatctgaatcccaggtacagcaggacacccct
gtggctgactttaaacccagcactctgcttgtggatgagaaaacccattcaccaagccca
gacatgagttccagtgcagctgttactgaagtgaagccaagcatagtacctacaaatggc
aaggccagtccccactctggggaggcggtccccagctccaccacgaatgccacggtccct
gacgtcaagtctagcgtcttggtcatcgatgtcaaacccagtggcccagcagtggggcta
gagatgtctgggccggctatcggcaccccggtccccaagcagcacagtgaggtccacctt
accctggccaaacctcagtcagtggtgaacaggacggccaggccatttggagtccagtct
caagggatcaatagccagttggaacggagtccgatgatggagagacgccccatgggagag
aggagccccagggcacaggcgcacacaataggggagagaagtcctcaggttcagaggcat
actgtaatgatgagaagccctatggtggagaggaggcctttgagagagagcagtcctacc
atggagaggggccctatggtagagagaccggtgatggttgagagaagtcctgctttggaa
aaacgcccgttgggaaatttcactccaccccccacctacgctgagactttgtcaacgaca
cctctggcctctaggggcaggtctccgccttcatattctgtcctgtaccccagcactgag
cacaagcaaacgcgtcttaaggggcctagctatggggagggcagaccagcatctgtagcc
aagacgggcatcttggaggagtcgatggcccgccggggcaataggaagtccatgttcacc
tttgtggagaagcccaaagtgacccctaaccctgatctcttggatttggtacagacagct
gatgagaaacggaagcagagagaccacggggagctgggcccagaggaggaaccatttgca
cttggagctgaagcatccaactttcagaatgagccaccccccagggactggtctagccct
acctctgaggataccctcccagaatggtcatcgtgcctcaagtcgcccagcatccgggcc
aagcctgagcgaaaaccaaaccagaacctcacggaggccactggcaagggagctgagctg
tatgcccgacgccagtcccgaatggagaaatatgtaattgagtcaccaggccatgctgag
tcggcccgctgcccatctcccactatgtccctgcctccttcctggaaatactccaatgct
ccggggtttccagggggcttccgggtggcaagccggagccctgcccgaacaccgcccgcc
tctctgtaccacggctacctgccagagaacaggactccacgcagggaggtggagcccacc
aaacagcagccttaccagctccaatcctcactctttgttctcactccctccaaggagcca
gccaagatcccagcaagagcagcctcacctgccaagccgggatctcttgatttggaacct
gtggggaggctggcaccctgcccagctggttctgtccttcccccttcgcctgccctgcct
cggccagcacgcacttcacctgccctgtgtccctcaccagtgggcccaggaggtcttgtc
caagatgttacccagatgagtggcagcagccccacctttggtggtgaagtatctccggtg
tctccttcccgggcatggtctccaagagccaagggccaagctccgagaccttcattctct
acacggaatgtggggattgagccccaggaaagatgggaatgtcgccccacctcccctccc
gagacccccggctcaccgcggccagccagcagtctggacggctgggggggccgtggtcct
tccgagttctgccagatggtcaccacgagcagtccccctccacccccgcccatgntcccc
tcctggagcgagggctccttgtcctcgatgcaggctgagcccaagggcagcagccgccag
atgcaggccctggttgccaggaacatcatcaatgccgcccgccggaagagctcctcctcc
ccccgatctccaggggcagaatggctgaggcccctctcagccacccaggccctgcctcct
gccagccccagagggctgggcagcccgtgtcctcccctgaagagcgccctgggagacggc
tatcgcctttcctccctgcccggtggtaccttctcccccatcctgaagagccccctgccc
tcgtcccaagcaccctttggggacggcccccggcccttcctaccagccagcccccggagt
ccaggcaccacccgacccttagccttcaggagccccttgccctcacctagtccacaggtt
cgttcacctgtcaagccctacaccagtcgctcgcccacagactctgacgtatccctcgac
tctgaggactcggggctcaagtcccccggtctccgtggctacaatatatgcccccggggc
tggcacgggagcagcctgcggctcaagagaggcagcctcccctcggagaccccctgcaca
tcctaa
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