Phascolarctos cinereus (koala): 110193662
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Entry
110193662 CDS
T05867
Symbol
BLM
Name
(RefSeq) Bloom syndrome protein
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
pcw
Phascolarctos cinereus (koala)
Pathway
pcw03440
Homologous recombination
pcw03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
110193662 (BLM)
03460 Fanconi anemia pathway
110193662 (BLM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcw03032
]
110193662 (BLM)
03400 DNA repair and recombination proteins [BR:
pcw03400
]
110193662 (BLM)
Enzymes [BR:
pcw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
110193662 (BLM)
DNA replication proteins [BR:
pcw03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
110193662 (BLM)
DNA repair and recombination proteins [BR:
pcw03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
110193662 (BLM)
Bloom's syndrome complex (BTR)
110193662 (BLM)
FA (Fanconi anemia) pathway
110193662 (BLM)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BLM_N
BDHCT_assoc
DEAD
BDHCT
Helicase_C
RecQ_Zn_bind
RQC
HRDC
Motif
Other DBs
NCBI-GeneID:
110193662
NCBI-ProteinID:
XP_020821239
UniProt:
A0A6P5IRM5
LinkDB
All DBs
Position
Unknown
AA seq
1450 aa
AA seq
DB search
MAVIPQNNLQQQLERHSAKEIQNKLNVLKPKSAGFTFKKRIPSSNSATQALVLRDKDVNV
TETFPLSKPFPSTKNQQTSISAFSERTSKGQQIQKFYSNQILSDSSKNTREPSCNLQPPA
KENSVNKELCKDSKKLELNSSFDSTILISDWDDIDDFDTSGNSKTYNTPSRTCFTKLSNT
QRSKGDKNNSSKTRTCKANGKTVDPELSNFPSGKSRQAELIKKKLPESEELSSPVICLDD
DSISKEFRNEDIQECHALKTQLGNERDDNEKKKYPDGVEQHTVDEPLGANFEEFNEDNFD
VDFIPPSPEEGVFSSSSSSLRCFSTLKEPSICDEKKNSTKLSNYFSSGSEKTTSPQPIQE
TSTKYDGKLLTLQQQLFHVMEDICSLVDIIPTYQLQGLDCGNQLLQHRDLRRKLLADANS
NKNDTSPPPLNWIYQPNSQDLTVNGKTAFSSLHSFQKGKSSFTGNLVREFKSTHLPFNPV
STTDCQGNFLDKTTRMFPNLDVSTGMHGTQRTTPEKSDLSSAKTNISEKILFSSQSPEPF
LSSNSTEISKAEEKYKRSHLLGNFLTSTAIKDQNKHINLVNDLRSNDFSETQDIDIFDID
DFDDYDWENPSYNSVEEESSKNIYLPIREGQPVKSFTERTPVTKTNCLSVVPANQNRSIS
IQNCPDKLVQNRPSRNPEHERFKSLDFPHSKEMMKIFHKKFGLHHFRTNQLEAINAVLLG
EDCFVLMPTGGGKSLCYQLPACVSPGVTIVISPLRSLIVDQVQKLTSLDIPATYLTGDKT
DSEAANIYLQLSKKDPIIKLLYVTPEKVCASNRLISTLENLYERKLLARFVIDEAHCVSQ
WGHDFRQDYKRLNMLRQKFPSVSMMALTATANPRVQKDILTQLKILNPQVFSMSFNRHNL
KYSVLPKKPKKVAFDCLEWIRKYHPHDSGIIYCLSRRECDTMADTLLKDGLAALAYHAGL
SDSARDEVQHKWVNQDGCQVICATIAFGMGIDKPDVRYVIHSSLPKSVEGYYQESGRAGR
DGEMSHCLLFYSYHDVTRLKRLILMEKDGNSHTRQTHFNNLYSMVHYCENIMECRRLQLL
SYFGENEFNPNFCKEYPDVTCDNCCKKKDYKTRDVTEDVKNIIKFVQEHDSLNGERNTKN
MGSCGRFTMNMLVDIFLGSKSARIQSGIFGKGAAYSRHNAERLLKKLILDKILDEDLYIN
ANDQAIAYVMLGEKAQAVLDGYLKVDFLETENFSGIRKQKASVAKISQREELVKKCLGEL
TEVCKGLGKVFGVHYFNIFNTVTLKKLAESLSSDPEVLLQIDGVTEDKLEKYGAEVISVL
QKYSKWTLPANDNDSLLPSPHNAERNEEETQVSSHYFSNKTKNERKRRRLPTFQKSKRKK
TSHGSQQSNSGRVSNTCRKASSKSKSSNDFGSNSASYNSQVTSGASRKLGIMAPPKPKNR
PFFQPSYSFL
NT seq
4353 nt
NT seq
+upstream
nt +downstream
nt
atggctgttattcctcagaataatctgcaacagcagctagaacgtcactcagccaaagaa
attcaaaataaattaaatgttctgaaacccaaatctgcaggtttcacttttaaaaagaga
ataccttctagcaacagtgcaactcaggctcttgtgttaagagataaggatgttaatgtt
actgagacctttcctctcagtaagcctttccccagtaccaagaaccagcagacaagtatc
agtgccttctcagagagaacttcaaaaggacaacaaatccagaagttttattcaaatcag
atattgtcagattcttcaaagaacacccgtgaaccttcatgtaatttacaacctcctgca
aaagaaaactctgtcaacaaggaattgtgtaaagattctaagaaattagaattgaattct
tcatttgactctaccatcctcatcagtgactgggacgacatagatgactttgatacttct
ggcaattcgaaaacttataatacaccctccagaacttgttttacgaaactaagtaatact
cagagatcaaaaggggataaaaataactcttctaaaacacggacatgtaaagcaaatggg
aagacggttgatccagagctttcaaattttccatctggtaaaagcagacaagcagaattg
attaaaaaaaagttgcctgaatcagaagagctaagtagtcctgtgatttgccttgatgat
gattccatttccaaagagtttagaaatgaagatattcaagaatgccatgctttgaaaact
cagttgggcaatgaaagagatgacaatgaaaagaagaaatatcctgatggagttgagcaa
catacagttgatgaacctttaggtgctaacttcgaggaatttaacgaagacaattttgat
gtagattttattccaccttctccagaagaaggagtgttttcttcctcttcttcctctttg
aggtgctttagtactctaaaggagccttccatctgtgatgagaaaaaaaattctactaag
ctatcaaattacttttcatcaggatctgagaaaacaactagcccacagccaatacaggag
accagtacaaaatatgatggtaaattgttaactttgcaacaacagctttttcatgtgatg
gaggacatctgttcattagttgatattattcctacttatcaacttcaaggcttggattgc
ggaaaccaacttctccagcatcgagatcttagaagaaaactcttagctgatgcaaattcc
aacaaaaatgacactagtcctccacccttgaattggatataccagcctaattcacaggat
cttactgtaaatggcaaaacagctttttcctctctgcattcatttcaaaagggtaaatct
tccttcacagggaatttagtaagagaatttaaatctacacaccttccttttaatcctgtc
tccactactgattgtcaaggaaattttcttgataaaactacaaggatgtttccaaatctg
gatgtttcaacagggatgcacggcacacaaagaactactccagaaaaatcagatctgtca
tctgctaagacaaatatctctgaaaaaatattattcagttcccagtcaccagaacctttt
ctgagtagcaattccactgaaatatcaaaggcagaagagaaatataaaaggtcacatctc
ttaggcaattttctcacgagcactgctataaaagatcagaataaacacattaatttggtt
aatgacctgagaagtaacgatttttctgaaacccaagatattgatatttttgatatagat
gattttgatgattatgactgggaaaacccaagttacaattcagtagaggaagaatcatcc
aaaaatatctatctgcctattcgggaaggtcagccagttaaatcatttacagaaagaact
ccagtgaccaagacaaactgcctctcagtagtacctgctaaccagaatagaagcatctca
atccagaattgccctgacaaactggtacaaaatagaccatccagaaatccagaacatgaa
cgtttcaaaagtcttgattttccacattcaaaagaaatgatgaagatttttcacaaaaaa
tttggcctgcatcattttcgtacaaatcagctagaggcaatcaatgctgttctgcttggt
gaagactgtttcgtcctaatgcccactggagggggtaaaagcctgtgttaccagctacca
gcttgtgtttctcccggagttactattgtgatctctccactgagatcactaatagtagac
caagtgcaaaagctaacatcattggatattccagccacttatctgacaggtgataagaca
gattctgaagctgcaaatatttatctccaattgtcaaaaaaagatccaatcataaaactt
ctgtacgttactccagaaaaggtctgtgcaagtaacaggctgatttctactctggaaaat
ctgtatgagagaaaattattggcacgttttgtcattgatgaagcacactgtgtcagtcag
tggggacatgattttcgtcaagactataaaagattgaatatgcttcgacaaaaatttcct
tctgtttcaatgatggctctcacagccactgctaaccccagggtgcagaaggatatccta
actcagttgaagattctcaaccctcaagtgtttagcatgagttttaatagacataatctg
aagtatagtgtgttgcccaaaaaaccgaaaaaggtggcatttgattgcttagagtggatc
agaaaatatcacccacatgactcggggataatttactgcctttccaggcgtgaatgtgac
acgatggctgacaccttactgaaggatggtctcgctgcccttgcttatcatgctggcctc
agtgattcagcaagagacgaagtacagcacaagtgggttaatcaagatggctgccaggtt
atctgtgcaacaattgcttttggcatggggattgacaaaccagatgtgcgctatgttatc
cattcatctctcccaaaatcagtagaagggtattaccaggaatctggcagagctggaaga
gatggtgaaatgtctcactgtctgcttttctacagctatcatgatgtaaccagacttaag
agacttattcttatggagaaagatggaaacagtcatacacgacagactcacttcaataat
ctgtatagcatggtacattactgtgaaaatataatggagtgccgaagactccagcttttg
tcatacttcggagaaaatgagtttaatcctaatttttgtaaggaatacccagatgtgact
tgtgataattgctgcaaaaagaaggattacaagacaagggatgtgacagaagatgtgaaa
aacatcataaaatttgttcaagagcatgattcattgaatggagaaagaaatactaagaat
atgggctcttgtggaagatttactatgaacatgctggttgatattttcctggggagtaaa
agtgctaggattcagtcaggcatatttgggaagggagctgcttattcacgacataatgct
gaaagacttttgaaaaagctgatacttgacaaaattttggacgaagatttgtacatcaac
gctaatgaccaagcaattgcctatgtgatgttaggcgagaaagcccaggcggttctggat
gggtatttaaaggtggactttctggaaactgagaatttcagtggtataagaaagcaaaag
gcttcagtagcaaagatttcccagagagaagaactagttaagaagtgcctgggagaactt
acagaggtctgcaaagggctcgggaaggtttttggtgtccattatttcaacatatttaat
actgttactctaaaaaagcttgcagagtctttatcttctgatcctgaggttttacttcag
attgatggtgttacggaagacaaactggaaaaatacggtgctgaagtgatttcagtactc
cagaaatactctaagtggacgttgccagctaatgataatgattccctattgccaagtcct
cacaatgccgaaagaaatgaagaagagacacaagtatcttctcactatttttcaaataaa
actaaaaatgagaggaagaggagaaggttgccaacctttcaaaagtccaaaaggaaaaaa
acaagccatgggagccagcaatcaaattcagggagggtgtctaacacgtgcagaaaggca
tcttctaaaagcaaatcctcaaatgattttggatccaattcagcatcttataattctcaa
gtaacttcaggagccagtagaaaattagggattatggctccaccaaagcctaaaaataga
ccattctttcaaccatcatattcatttttgtaa
DBGET
integrated database retrieval system
