Phascolarctos cinereus (koala): 110193686
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Entry
110193686 CDS
T05867
Symbol
PRPF4
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4 isoform X1
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
pcw
Phascolarctos cinereus (koala)
Pathway
pcw03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110193686 (PRPF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcw03041
]
110193686 (PRPF4)
Spliceosome [BR:
pcw03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
110193686 (PRPF4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40_Prp19
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WD40_Gbeta
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
PRP4
DSE1_N
ASA1
Beta-prop_EML
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_Aladin
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_WDR41
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_Vps41
Beta-prop_NOL10_N
WD_LRWD1
Beta-prop_IFT140_1st
WD40_like
Beta-prop_WDR11_1st
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
110193686
NCBI-ProteinID:
XP_020821290
UniProt:
A0A6P5IGY2
LinkDB
All DBs
Position
Unknown
AA seq
523 aa
AA seq
DB search
MVSSRASATATKTPSRTPEDTASPVVKKPHIYYGSLEEKEKERLARGESGMLGKEGIKAG
IEAGNINITSGEVFEIEEHISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPI
TLFGEGPAERRERLRNILSVVGTDALKKTKKDDEKSKKSKEEYQQTWYHEGSNNLKTARL
WIANYSLPRAMKRLEEARLHKEIPETSRTSQKQELHKSLRSLNNFCSQIGDDRPISYCHF
SPNSKLLATACWSGLCKLWSVPDCSLLHTLRGHNTNVGAIVFHPRSTVSLDKKDVNLASC
AADGSVKLWSLESDEPVADIEGHSVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEIL
HQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNG
YHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTH
PGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLWMAE
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggtttcttctcgagcttcggccacggcaaccaaaacccctagtaggactcctgaagat
accgcctcccctgtagtgaagaaacctcatatctattatggcagtttggaagagaaggag
aaggagcgtcttgcaagaggggagtcagggatgctggggaaagagggaattaaagctgga
attgaggctggaaatattaacataacttctggggaagtctttgaaattgaagaacatatc
agtgaaaggcaagccgaagtgttggctgaatttgagcgaaggaagcgagcccggcagatc
aatgtttccacggatgactcagaagtcaaggcttgtcttcgagccctgggtgaaccaatc
acactttttggagagggccctgctgaaaggagagagagattgagaaatatcctctctgtg
gttggcacagatgccttaaaaaagaccaaaaaggatgatgaaaaatccaaaaagtccaaa
gaagagtatcaacaaacctggtaccatgaaggatccaataatctaaagactgctaggctg
tggattgctaattattcactacccagggcaatgaaacgcttggaagaagcccgtctccat
aaagagattccagagacctctaggacatcacaaaagcaggaattgcataaatctctccgg
tctttgaataacttctgcagccagattggagatgatcgacccatttcctattgtcatttc
agtcccaattccaaactactggccacagcgtgttggagcgggctgtgcaaactctggtct
gtccctgattgcagcctcctacacactttaagaggccataacaccaatgtaggagcaatt
gtttttcaccccagatccactgtttccttggacaagaaagatgtcaacctagcctcttgt
gccgctgatgggtctgtgaaactgtggagtctagagagtgatgaacctgtggcagatatt
gaaggccattcggtgcgtgtagcaagagtgatgtggcatccctcaggacgtttcctgggt
actacctgctatgaccgttcatggcgcctgtgggacttagaggcccaggaggagattcta
caccaggagggccacagcatgggagtgtatgacatcgccttccaccaggatggttctttg
gcgggcactgggggactggatgcctttggtcgtgtatgggacctgcgcacaggacgatgc
atcatgttcctagagggccacctgaaggagatttatgggatcaacttctcccctaatggt
taccacattgcaactggcagtggtgacaacacatgcaaagtgtgggacctcaggcagcgg
cgttgcgtctacaccatccctgcccaccaaaacttggtgactggagtcaagtttgagcct
atccatgggaactttttgctcactggtgcctatgacaacacagccaagatctggacacac
cctggttggtccccactgaagactctggccggccatgagggaaaagtgatgggcctggac
atttcctctgatggtcagctcatagccacctgttcctatgacaggaccttcaaactttgg
atggctgaatag
DBGET
integrated database retrieval system
