Phascolarctos cinereus (koala): 110194292
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Entry
110194292 CDS
T05867
Symbol
POLR2A
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase II subunit RPB1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
pcw
Phascolarctos cinereus (koala)
Pathway
pcw03020
RNA polymerase
pcw03420
Nucleotide excision repair
pcw05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
110194292 (POLR2A)
09124 Replication and repair
03420 Nucleotide excision repair
110194292 (POLR2A)
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
110194292 (POLR2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcw03021
]
110194292 (POLR2A)
03400 DNA repair and recombination proteins [BR:
pcw03400
]
110194292 (POLR2A)
Enzymes [BR:
pcw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
110194292 (POLR2A)
Transcription machinery [BR:
pcw03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
110194292 (POLR2A)
DNA repair and recombination proteins [BR:
pcw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
110194292 (POLR2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_R
Motif
Other DBs
NCBI-GeneID:
110194292
NCBI-ProteinID:
XP_020822162
UniProt:
A0A6P5IJ14
LinkDB
All DBs
Position
Unknown
AA seq
1970 aa
AA seq
DB search
MHGGGPPSGDSACPLRTIKRVQFGVLSPDELKRMSVTEGGIKYPETTEGGRPKLGGLMDP
RQGVIERTGRCQTCAGNMTECPGHFGHIELAKPVFHVGFLVKTMKVLRCVCFFCSKLLVD
SNNPKIKDILGKSKGQPKKRLTHVYDLCKGKNICEGGEEMDNKFGVEQPEGDEDLTKEKG
HGGCGRYQPRIRRTGLELYAEWKHVNEDSQEKKILLSPERVHEIFKRISDEECFVLGMEP
RYARPEWMIVTVLPVPPLSVRPAVVMQGSARNQDDLTHKLADIVKINNQLRRNEQNGAAA
HVIAEDVKLLQFHVATMVDNELPGLPRAMQKSGRPLKSLKQRLKGKEGRVRGNLMGKRVD
FSARTVITPDPNLSIDQVGVPRSIAANMTFAEIVTPFNIDRLQELVRRGNSQYPGAKYII
RDNGDRIDLRFHPKPSDLHLQTGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWS
TFRLNLSVTTPYNADFDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQD
TLTAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIVPGHI
NCIRTHSTHPDDEDSGPYKHISPGDTKVVVENGELIMGILCKKSLGTSAGSLVHISYLEM
GHDTTRLFYSNIQTVINNWLLIEGHTIGIGDSIADAKTYQDIQNTIKKAKQDVIEVIEKA
HNNELEPTPGNTLRQTFENQVNRILNDARDKTGSSAQKSLSEYNNFKSMVVSGAKGSKIN
ISQVIAVVGQQNVEGKRIPFGFKHRTLPHFIKDDYGPESRGFVENSYLAGLTPTEFFFHA
MGGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGEDGLAGES
VEFQNLATLKPSNKAFEKKFRFDYTNERALRRTLQEELVKDVLSNAHIQNELEREFERMR
EDREVLRVIFPTGDSKVVLPCNLLRMIWNAQKIFHINPRLPSDLHPIKVVDGVKELSKKL
VIVNGEDPLSRQAQENATLLFNIHLRSTLCSRRMAEEFRLSGEAFDWLLGEIESKFNQAI
AHPGEMVGALAAQSLGEPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTPSLT
VFLLGQSARDAERAKDILCRLEHTTLRKVTANTAIYYDPNPQSTVVAEDQEWVNVYYEMP
DFDVARISPWLLRVELDRKHMTDRKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIR
IMNSDENKMQEEEEVVDKMDDDVFLRCIESNMLTDMTLQGIEQISKVYMHLPQTDNKKKI
IITEDGEFKALQEWILETDGVSLMRVLSEKDVDPVRTTSNDIVEIFTVLGIEAVRKALER
ELYHVISFDGSYVNYRHLALLCDTMTCRGHLMAITRHGVNRQDTGPLMKCSFEETVDVLM
EAAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLLDAEKCKYGMEIPTNIPGLGAAGPTG
MFFGSAPSPMGGMSPAMTPWNQGATPAYGAWSPSVGSGMTPGAAGFSPSAASDASGFSPG
YSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSP
SYSPTSPSYXPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP
TSPSYXPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS
YXPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPT
SPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKY
SPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTS
PKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDDSDEEN
NT seq
5913 nt
NT seq
+upstream
nt +downstream
nt
atgcacggtgggggacctccctctggggatagcgcatgcccactgcgaactatcaagcgc
gtgcaattcggagtcctcagtccagatgagctgaaacggatgtctgtgacagaaggtggc
atcaagtaccctgaaacaacagaggggggacgccccaagcttgggggactgatggatccc
aggcaaggagtgattgaacggacaggacgctgtcagacatgtgcagggaacatgacagaa
tgtcctggccactttgggcacatagagctggctaagcctgtgttccatgtgggtttcttg
gtgaagacaatgaaagttctgcgctgtgtctgcttcttctgttccaagttgcttgtggat
tcaaacaatccaaaaatcaaagatatactgggtaagtcaaaaggacaaccaaagaaacga
ctcacccatgtctatgacctctgcaaaggcaagaatatctgcgagggaggtgaggaaatg
gacaacaagtttggagtagagcagcctgaaggtgatgaggatcttaccaaagagaagggt
catggtggatgtgggagataccagcctcgaattcggcgcacgggattagagctgtatgca
gagtggaaacatgtcaatgaggactcccaggaaaagaaaatcctgctaagtcctgagcgt
gtacatgagattttcaagcgcatctcagatgaagagtgtttcgtgttgggcatggagcca
cgctacgctcggcccgagtggatgattgttaccgtcctccctgttccccctctctctgtg
cggcctgctgtcgttatgcagggctctgcccgtaaccaggatgatctgacacacaagttg
gctgacattgtgaagatcaacaatcagctacggcggaatgagcagaatggagcagctgct
cacgtgatcgctgaggatgtgaagttgctgcagttccatgtggccaccatggtggacaat
gagctgcctggcctgcccagggcaatgcagaagtcaggtaggcccctcaagtccctgaag
cagcggttgaagggcaaagaagggcgagtccgtggtaatctgatgggcaagcgggtggac
ttttcagcccgcacagtcatcacacctgatcctaacctttccatcgaccaagtaggcgtg
cctcgttctattgctgccaacatgacctttgcagaaatcgtcacccccttcaacattgac
aggcttcaagagctggtacggagaggaaacagccagtaccctggagccaagtatatcatc
cgagataatggggaccgaattgatctgcgcttccaccccaaacctagtgacctccaccta
caaactggctacaaggtagagcgtcatatgtgtgatggggacattgtcatcttcaaccgg
cagccaacactacacaagatgtctatgatgggtcatagggtccgcatcttgccttggtcc
acattccgtctgaatctcagtgtgacaacaccctacaatgcagactttgatggggatgag
atgaacctacacttaccacagtctctagagactagagcagagatccaggaactggccatg
gtgccccgaatgattgttacacctcagagcaaccgaccagtcatgggcattgtgcaagat
acacttacagcagtgcgaaagttcaccaagagagatgtcttcctagagaggggtgaagtg
atgaacttattgatgttcctttcaacatgggatgggaaggtaccccaaccagccatactg
aaaccccgacctttgtggacaggaaaacagatcttctcccttatagtgcctgggcacatc
aactgtatccgaacccacagcactcaccctgatgatgaagacagtggcccttacaagcac
atttctcctggggacaccaaggtggtggtggagaatggggaactgatcatgggtattctg
tgcaaaaaatctctgggcacatcagctggatcacttgtgcacatctcatacctagagatg
ggccatgacactactcgtctcttttactccaacattcagacagtcatcaataactggctt
ctcatagaaggtcataccattggcattggggactccatcgctgatgccaagacctaccag
gatattcagaacaccatcaagaaagccaagcaagatgtaatagaggtgatcgagaaggca
cataacaacgaactagaaccaacaccgggaaacactcttcggcagacatttgaaaatcag
gttaaccgaatccttaatgatgcaagagacaagactggctcttctgcccagaagtccctg
tctgaatacaacaatttcaagtccatggttgtgtcaggagcaaagggttctaaaatcaat
atttcccaggttattgcagtagtaggacagcagaacgtagaaggcaagcggattcccttt
ggcttcaaacaccggacccttccccacttcatcaaagatgattatggtcctgagagccga
ggctttgtggagaactcatacttggctggtctcacacccactgagttcttcttccatgct
atgggtgggcgtgaagggcttattgacactgctgtcaagacagctgaaactggctatatc
cagagacgtctgatcaaatcaatggagtctgtgatggtaaaatatgatgcaacagtgcgc
aactccattaatcaggtggtacagctacgttatggtgaagatggactggctggtgaaagc
gttgagttccagaacctggcaaccctgaagccttccaataaggcctttgagaaaaagttc
cgttttgactacactaatgagcgagcactgcgtcgtactctgcaagaggaattagtaaag
gatgtactgagtaatgcccatatccagaatgagctagagcgtgaatttgagcgaatgcgt
gaggatagggaggtgcttcgagtgatcttccctactggagacagtaaggtggttcttccc
tgtaacttactgcgtatgatctggaatgcccagaaaatcttccacatcaacccccgcctc
ccctccgacctgcaccccatcaaggttgttgatggtgtgaaggagttgagtaagaaattg
gtgattgtcaatggagaagaccctctgagccgccaggcacaggaaaacgctacactgctc
ttcaatattcacctgcgctctactctgtgctcgagacgcatggcagaggagttcagacta
agtggggaagccttcgactggttactaggggagattgagtccaaattcaaccaggctatt
gcccatcctggggagatggtgggagctctagcagcccagtccttaggagagccagccacc
cagatgaccttgaacacttttcactatgctggtgtgtctgccaagaatgtgacactgggt
gtgcctcgactcaaggaacttatcaacatttctaagaagcccaagacaccctcacttact
gtgttcttgttgggtcagtctgcccgtgatgctgagagagccaaggatatcttgtgccgg
ctggaacacacaactctgaggaaggtgacagctaacactgccatctactacgaccctaat
cctcagagcacagtagtagcagaggatcaggagtgggtcaatgtctattatgagatgcct
gactttgatgttgcccgaatttcaccctggctgctgcgagtagagctggaccgtaagcac
atgacggatcgaaagctgactatggagcagattgctgagaaaataaatgcaggttttggt
gatgacttaaactgcatcttcaatgatgacaacgcagagaagctggtcctcagaattcga
atcatgaacagtgatgagaacaagatgcaagaggaagaggaggtggtggataagatggat
gatgacgtctttctgcgttgcattgagtccaacatgctgacggatatgacattgcagggc
atcgagcaaatcagcaaggtgtatatgcacttgcctcagacagacaataagaagaagatc
atcatcacagaagacggagagttcaaggcattgcaggagtggattctagaaacagatgga
gtgagtctgatgcgagtattgagtgagaaggacgtggaccctgtacgcacaacgtcgaat
gatatcgtggagatcttcacggtgctgggcattgaggctgtgaggaaggcattagagcga
gaactgtatcatgtgatctccttcgatggctcctatgtaaactaccgccacctggcccta
ctttgtgacaccatgacctgccgggggcacttgatggccatcaccaggcacggcgtcaac
cgacaagacacaggacccctcatgaagtgttcttttgaagagacggtggatgtgctgatg
gaggctgcagcccatggagagagtgaccccatgaaaggtgtgtctgagaacatcatgctt
ggccagctggcccctgctggcacgggctgctttgacctcttactggatgctgagaaatgc
aagtatggcatggagatccccactaacattcctggtctgggagcagctggacctactggc
atgttctttggctcagcccccagccccatggggggcatgtctcctgcaatgactccctgg
aaccagggggccacccctgcttatggagcctggtcccctagtgttgggagtgggatgact
cctggagctgctggcttctcccctagtgctgcatcagatgctagtggctttagccctggc
tattcaccagcctggtcccctacacctggctccccaggatctccaggcccttcaagccct
tatatcccttcaccaggtggagccatgtctcccagctattcaccaacatctccagcctat
gagccccggtccccagggggttatacccctcagagtccttcgtactctcccacctctccc
tcctactcacccacatctcccagctacntcccaaccagccccaactatagccccacctct
cccagctactcccccacatctcccagctattctcccacctctcccagctactcccccacc
tctcccagctactcccccacctctcccagctactcccccacctctcccagctactctccc
acatctcccagctacntccccacctctcccagctactcccctacatctcccagctactcc
cccacctctcccagctactcccccacatcacccagctattcgcccacctctcccagctat
tcccccacctctcccagctattcccccacctctcccagctattcccctacctctcccagc
tatntccctacctcccctaactactcacctaccagccccaactataccccaacatcaccc
agctatagtccaacttcccctagctactcacccaccagccccaactatacccctacaagc
cccaactacagtcctacctcccccagctactctccaacctctcccagctactccccaacc
tcccctagctattctccctcgagcccacgttatacaccacagtccccaacctatactcca
agctcccctagttacagcccgagctcccccagctatagccccacttcacctaaatatacc
ccaaccagtccttcctatagccctagctcaccagagtatacaccaacttcccccaagtac
tcgcctaccagccccaagtattcgcccactagccccaagtactcgcccaccagccctact
tactcacctaccaccccaaaatactcacctacatctcctacctactcgccaacctcacca
gtctatactccaacctcccccaagtactcccctacctcccccacctattcacctacctct
cccaagtattcaccaaccagcccaacttactcacccacctctcctaagggttctacctac
tctcccacatcacctggctactccccaaccagtcccacctacagcctcaccagcccagcc
atcagcccagatgacagtgatgaggaaaactga
DBGET
integrated database retrieval system
