Phascolarctos cinereus (koala): 110194491
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Entry
110194491 CDS
T05867
Symbol
VIM
Name
(RefSeq) LOW QUALITY PROTEIN: vimentin
KO
K07606
vimentin
Organism
pcw
Phascolarctos cinereus (koala)
Pathway
pcw04820
Cytoskeleton in muscle cells
pcw05169
Epstein-Barr virus infection
pcw05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
110194491 (VIM)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
110194491 (VIM)
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
110194491 (VIM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcw03019
]
110194491 (VIM)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pcw04812
]
110194491 (VIM)
04147 Exosome [BR:
pcw04147
]
110194491 (VIM)
Messenger RNA biogenesis [BR:
pcw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
110194491 (VIM)
Cytoskeleton proteins [BR:
pcw04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
110194491 (VIM)
Exosome [BR:
pcw04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
110194491 (VIM)
Exosomal proteins of other cancer cells
110194491 (VIM)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Filament
Filament_head
DUF1664
TolA_bind_tri
Sec10_N
TPR_MLP1_2
RBD-FIP
Laminin_II
DUF4515
CENP-F_leu_zip
Motif
Other DBs
NCBI-GeneID:
110194491
NCBI-ProteinID:
XP_020822522
UniProt:
A0A6P5IK73
LinkDB
All DBs
Position
Unknown
AA seq
467 aa
AA seq
DB search
MTTRSVSSSSYRRMFGGSSAGGRPSSSRSYVTSTTRYSLGSAIRPXTTRSVYSSSPGGVY
ATRSSAVRLRSSAPIPGVRLLQDSVDFSLADAINTEFRNTRTNEKVELQELNDRFANYID
KVRFLEQQNKILLAELEQLKGQGKSRLGDLYEEEMRELRRQVDQLTNDKARVEVERDNLA
EDIMRLREKLQEEMMQREEAESTLQSFRQDVDNASLARLDLERKVESLQEEIAFLKKLHD
EEIQELQAQIQEQHVQIDVDVAKPDLTAALRDVRQQYESVAAKNLQEAEEWYKSKFADLS
EAANRNNDALRQAKQESNEYRRQVQSLTCEVDALKGTNESLERQMREMEENFAVEAANYQ
DTIGRLQDEIQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRIALPLPNFS
SLNLRETNLESHPMVDTHSKRTLLIKTVETRDGQVINETSQHHDDLE
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgactacccggtcggtatcctcatcctcctaccgcaggatgttcggcggcagcagcgcg
ggcggacggcccagctccagccgcagctacgtgacctcgaccacccgctacagcttgggc
agcgccatccgcccgnacaccacccgcagcgtgtactcctcttccccgggcggcgtgtat
gccacgcgctcgtcggcggtgcgcctgaggagcagcgccccgattcccggggtgaggctg
ctccaggactcggtggacttctccctggccgacgccatcaacaccgagttcaggaacacc
cgcacaaacgagaaggtggagctgcaggagctgaatgaccgcttcgccaactacatcgac
aaggtgcgttttctggagcagcagaacaagatcttgctggctgagctagagcagctcaaa
gggcagggcaagtcgcgcctgggggacctgtacgaggaggagatgcgggagctgcgccgg
caggtggaccagctcaccaacgacaaagcccgggtggaggtggaacgggacaacctggcc
gaggacatcatgcggctccgcgagaagttgcaagaggagatgatgcagagagaggaagct
gagagcaccttgcagtctttcagacaggatgttgacaatgcttccttagcgcgtctagac
ctggagcgtaaagttgaatccctgcaagaagagattgctttcttgaagaaacttcatgat
gaggaaatccaagagctgcaggcccagattcaagaacaacacgttcagatcgatgtggat
gttgccaagcccgacctcactgcagccctgcgtgatgtccgtcagcagtacgaaagcgtg
gctgccaagaaccttcaggaggctgaggaatggtacaagtccaaatttgctgatctctct
gaagctgctaataggaacaatgatgccctgcgccaggctaagcaagaatctaatgaatac
cgacgacaggtgcagtccctcacctgtgaagtggatgcacttaaaggaactaatgagtcc
ctggaacgccagatgcgtgaaatggaggagaactttgctgttgaagctgctaactaccaa
gacactattggccgcctgcaggatgaaatccagaacatgaaagaagagatggctcgtcac
ctgcgagaatatcaggacctgctgaatgtcaagatggctcttgatattgagattgccacc
tacaggaaactactggagggagaggagagcagaattgctctgcctcttcccaatttctct
tccctgaatctgagggaaaccaaccttgagtcacacccgatggttgacacccattcaaag
agaacactcctaatcaagactgttgaaactagagatggacaggtcatcaatgaaacttct
caacaccatgatgatctggaatga
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