KEGG   Phascolarctos cinereus (koala): 110194491
Entry
110194491         CDS       T05867                                 
Symbol
VIM
Name
(RefSeq) LOW QUALITY PROTEIN: vimentin
  KO
K07606  vimentin
Organism
pcw  Phascolarctos cinereus (koala)
Pathway
pcw04820  Cytoskeleton in muscle cells
pcw05169  Epstein-Barr virus infection
pcw05206  MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:pcw00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    110194491 (VIM)
 09160 Human Diseases
  09161 Cancer: overview
   05206 MicroRNAs in cancer
    110194491 (VIM)
  09172 Infectious disease: viral
   05169 Epstein-Barr virus infection
    110194491 (VIM)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pcw03019]
    110194491 (VIM)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:pcw04812]
    110194491 (VIM)
   04147 Exosome [BR:pcw04147]
    110194491 (VIM)
Messenger RNA biogenesis [BR:pcw03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     110194491 (VIM)
Cytoskeleton proteins [BR:pcw04812]
 Eukaryotic cytoskeleton proteins
  Intermediate filaments
   Intermediate filaments
    Type III
     110194491 (VIM)
Exosome [BR:pcw04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   110194491 (VIM)
  Exosomal proteins of other cancer cells
   110194491 (VIM)
SSDB
Motif
Pfam: Filament Filament_head DUF1664 TolA_bind_tri Sec10_N TPR_MLP1_2 RBD-FIP Laminin_II DUF4515 CENP-F_leu_zip
Other DBs
NCBI-GeneID: 110194491
NCBI-ProteinID: XP_020822522
UniProt: A0A6P5IK73
LinkDB
Position
Unknown
AA seq 467 aa
MTTRSVSSSSYRRMFGGSSAGGRPSSSRSYVTSTTRYSLGSAIRPXTTRSVYSSSPGGVY
ATRSSAVRLRSSAPIPGVRLLQDSVDFSLADAINTEFRNTRTNEKVELQELNDRFANYID
KVRFLEQQNKILLAELEQLKGQGKSRLGDLYEEEMRELRRQVDQLTNDKARVEVERDNLA
EDIMRLREKLQEEMMQREEAESTLQSFRQDVDNASLARLDLERKVESLQEEIAFLKKLHD
EEIQELQAQIQEQHVQIDVDVAKPDLTAALRDVRQQYESVAAKNLQEAEEWYKSKFADLS
EAANRNNDALRQAKQESNEYRRQVQSLTCEVDALKGTNESLERQMREMEENFAVEAANYQ
DTIGRLQDEIQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRIALPLPNFS
SLNLRETNLESHPMVDTHSKRTLLIKTVETRDGQVINETSQHHDDLE
NT seq 1404 nt   +upstreamnt  +downstreamnt
atgactacccggtcggtatcctcatcctcctaccgcaggatgttcggcggcagcagcgcg
ggcggacggcccagctccagccgcagctacgtgacctcgaccacccgctacagcttgggc
agcgccatccgcccgnacaccacccgcagcgtgtactcctcttccccgggcggcgtgtat
gccacgcgctcgtcggcggtgcgcctgaggagcagcgccccgattcccggggtgaggctg
ctccaggactcggtggacttctccctggccgacgccatcaacaccgagttcaggaacacc
cgcacaaacgagaaggtggagctgcaggagctgaatgaccgcttcgccaactacatcgac
aaggtgcgttttctggagcagcagaacaagatcttgctggctgagctagagcagctcaaa
gggcagggcaagtcgcgcctgggggacctgtacgaggaggagatgcgggagctgcgccgg
caggtggaccagctcaccaacgacaaagcccgggtggaggtggaacgggacaacctggcc
gaggacatcatgcggctccgcgagaagttgcaagaggagatgatgcagagagaggaagct
gagagcaccttgcagtctttcagacaggatgttgacaatgcttccttagcgcgtctagac
ctggagcgtaaagttgaatccctgcaagaagagattgctttcttgaagaaacttcatgat
gaggaaatccaagagctgcaggcccagattcaagaacaacacgttcagatcgatgtggat
gttgccaagcccgacctcactgcagccctgcgtgatgtccgtcagcagtacgaaagcgtg
gctgccaagaaccttcaggaggctgaggaatggtacaagtccaaatttgctgatctctct
gaagctgctaataggaacaatgatgccctgcgccaggctaagcaagaatctaatgaatac
cgacgacaggtgcagtccctcacctgtgaagtggatgcacttaaaggaactaatgagtcc
ctggaacgccagatgcgtgaaatggaggagaactttgctgttgaagctgctaactaccaa
gacactattggccgcctgcaggatgaaatccagaacatgaaagaagagatggctcgtcac
ctgcgagaatatcaggacctgctgaatgtcaagatggctcttgatattgagattgccacc
tacaggaaactactggagggagaggagagcagaattgctctgcctcttcccaatttctct
tccctgaatctgagggaaaccaaccttgagtcacacccgatggttgacacccattcaaag
agaacactcctaatcaagactgttgaaactagagatggacaggtcatcaatgaaacttct
caacaccatgatgatctggaatga

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