KEGG   Phascolarctos cinereus (koala): 110194662
Entry
110194662         CDS       T05867                                 
Symbol
WDR33
Name
(RefSeq) LOW QUALITY PROTEIN: pre-mRNA 3' end processing protein WDR33
  KO
K15542  polyadenylation factor subunit 2
Organism
pcw  Phascolarctos cinereus (koala)
Pathway
pcw03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:pcw00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    110194662 (WDR33)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pcw03019]
    110194662 (WDR33)
Messenger RNA biogenesis [BR:pcw03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     110194662 (WDR33)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st Beta-prop_IFT122_1st WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR3_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 WD40_Gbeta WDR55 EIF3I Beta-prop_IFT140_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_Aladin Beta-prop_TEP1_2nd ASA1 Beta-prop_WDR90_POC16_2nd DSE1_N WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_WDR19_1st CFAP251_N Beta-prop_EIPR1 WDR90_beta-prop_4th Beta-prop_WDR75_1st Collagen Beta-prop_Vps41 eIF2A WD40_RFWD3 Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_WDR35_TULP_N Beta-prop_DCAF4 Beta-prop_HPS5 Beta-prop_WDR11_2nd Beta-prop_WDR41 Ge1_WD40 PEP5_VPS11_N
Other DBs
NCBI-GeneID: 110194662
NCBI-ProteinID: XP_020822797
UniProt: A0A6P5IKZ4
LinkDB
Position
Unknown
AA seq 1337 aa
MATEIGSPPRFFHMPRFQHQAPRQLFYKRPDFAQQQAMQQLTFDGKRMRKAVNRKTIDYN
PSVIKYLENRVWQRDQRDMRAIQPDAGYYNDLVPPIGMLNNPMNAVTTKFVRTSTNKVKC
PVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTAD
HGGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERIL
RGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNG
NWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWH
VGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLL
PGMSEDGVEYDDLEPNSLAVIPGMGIPEQLKLAMEQEQMGKDESNEIEMTIPGLDWGMEE
VMQKDQKKVPQKKVPYAKPIPAQFQQAWMQNKVPIPAPNEVLNDRKEDIKLEEKKKTQAE
IEQEMATLQYTNPQLLEQLKIERLAQKQAEQVQPPPPPGGPLLGPQPFPGQGPMSQIPQG
FQQPHPPQQMPMNMAQMGPPGPQGQFRPPGPQGQMGPQGPPLHQGGAGPQGFMGPQGPPG
PQGPPQGLPRPQDMHGHQGMQRHPGPHGPMGPQGPPGPQGSSGPQGPMGPQGPPGPQSHL
GPQGPPGPQGHLGPQGPPGTQGMQGPPGPRGMQGPPHPHGMQGGPGSQGMQGPVSQGPLM
GLNPRGMQGPPGPRDNQGPAPQGMMMGHPPQEMRGPHPPSGLLGHGPQEMRGPQEMRGMQ
GPPPQGSMLGPPQEMRGPPGSQGQQGPPQGSMGPPPQGGMQGPPGPQGQQNPSRGPHPSQ
GPLPFQQQKTPLLGDGPRAPFNQEGQNPGPPPLIPGLGQQGSQGRIPPLNPGQGPGPNKG
DSRGPPNHHMGPMSERRHDQNSGPDHGPERGPFRAGQDCRGPPDRRGPHPDFPDDFNRPD
DFHPDKRFGHRLREFEGRGGPLPQEEKWRRGGPGPPYPPDHREFNEGDGRGANRGPPGAW
EGRRPADERFPRDPDDPRFRGRREESFRRGGAPQRHEGRGPPRGREGFPGPEDFGPEENF
DASDEATRGRDLRGRGRGTPRGGRKGLLPTPDEFPRFEGGRKPDSWDANREPGHEHFRDG
PRSDHPPHDGHSPASRERSSSLQGMDMASLPPRKRPWHDGPGTSDHREMEAPGGPSEDRG
KGRGGPGPSQRVPKSGRSSSLDGDHHDGYHRDEPYGGPQSSGTPSRGGRSGSNWGRGNNM
NSGPPRRGASRGGGRGR
NT seq 4014 nt   +upstreamnt  +downstreamnt
atggctacagaaattggttctccacctcgttttttccatatgccacggttccagcaccag
gcaccgaggcagcttttttacaaacgaccagactttgcgcagcagcaggcaatgcagcag
ctcacatttgatggaaaacgaatgagaaaggctgtgaaccggaagacaatagactacaat
ccctctgtgatcaagtatttggagaatagagtgtggcagagagaccaacgagatatgcgg
gcaatccaacctgatgcaggatattataatgatctggttccacctataggaatgctgaat
aatcctatgaacgcagtaacaactaaatttgttcggacatctaccaataaagttaaatgt
ccagtatttgttgttaggtggactcctgaagggagacggttggttactggggcttctagt
ggagagtttaccctgtggaatggactcactttcaattttgaaacaatattacaggctcac
gacagcccagtgagggccatgacctggtcacacaatgacatgtggatgctgacagcagac
cacgggggatatgtgaaatattggcagtccaacatgaacaacgtcaagatgttccaggca
cataaggaggcgattagagaggccagtttctcacccacggataataaatttgctacatgc
tctgatgacggaactgttagaatctgggactttctacgttgccatgaggaaagaattctt
cgagggcatggtgcagatgtgaaatgtgtagactggcatccaacaaaaggtttagtagtt
tcagggagtaaagacagtcaacagccaattaagttctgggatccaaagactgggcagagc
ctggcaacgctacatgcccataaaaacactgttatggaagtgaaattaaatctcaatggc
aattggctgcttacagcatcccgggaccacctctgcaaactttttgacattagaaatcta
aaagaggagcttcaagtctttcgagggcataagaaagaagccacagcggtagcctggcat
ccagttcatgaaggtctttttgctagtggaggatcagatggttctttattattctggcat
gttggggtagagaaggaagtaggtggaatggagatggcccatgaaggaatgatctggagt
ttagcgtggcatcctcttggacatattctctgttcaggatcaaatgaccataccagcaaa
ttctggaccagaaatagacctggagataaaatgcgggatcgttataacctgaacctactc
cctggaatgtcagaagatggagtagagtatgatgaccttgagcctaatagtctggcagtt
attccagggatgggaataccagagcagttaaaactagcaatggaacaagaacaaatgggg
aaagatgagtcaaatgaaatagaaatgaccattcccggattggactggggaatggaggag
gtaatgcaaaaggaccaaaagaaggtgccacaaaaaaaagttccttatgcaaagcctatt
ccagctcagttccaacaagcctggatgcagaacaaagttccaattcctgccccaaatgaa
gtactaaatgacagaaaagaggatattaaacttgaagaaaagaaaaagacacaagcagaa
atagagcaagaaatggcaacattgcagtacactaacccacagcttttggagcaactcaaa
attgaaagacttgcacagaaacaagccgaacaagtccaaccacctccaccaccagggggt
cctctacttggaccccagccttttccaggacaaggtccaatgtctcagattcctcaaggt
tttcagcagcctcatccaccccaacagatgccaatgaacatggctcaaatgggaccccct
ggtccacaaggacagttcagacctcctggacctcaggggcagatgggaccacaaggccct
ccattacatcagggaggtgctggtcctcaaggattcatgggaccacaaggacctccaggg
ccccaaggcccaccacaaggactcccaaggcctcaggatatgcatggccaccaaggaatg
caaagacatcctggaccgcatggcccaatgggacctcaaggaccacctgggccacagggt
agttctgggccacagggtcccatgggcccccaaggtccacctgggccacagagtcatttg
ggcccccaaggtccacctggtccccaaggtcatttaggccctcagggtccacctggtact
caagggatgcaaggaccacctggtccaagagggatgcagggacctcctcatccccatgga
atgcaaggaggaccaggctctcaggggatgcagggtcctgtgtcccaagggcctctaatg
ggtctgaatccaagaggaatgcagggacctccaggtccgcgagataaccaaggacctgct
ccacaagggatgatgatggggcacccacctcaagaaatgagaggacctcacccaccaagt
ggactactgggacatggtcctcaagagatgagaggtcctcaggaaatgagaggcatgcaa
gggcctccaccacaagggtcaatgctggggcctccccaggaaatgcgtgggcctcctggt
tcacagggacagcaagggccaccccagggttctatgggacctccacctcagggaggcatg
cagggtcccccaggacctcaaggacagcagaacccttcaagagggcctcatccttctcaa
ggcccattaccattccagcagcagaaaacaccccttctaggcgatggtccacgtgcaccc
tttaatcaggaaggacagaacccaggccccccacccttgataccaggactagggcagcag
ggatcacaaggtcgaatcccccctcttaatccgggacaaggacctggccctaataaaggt
gattctcgtggccctccaaaccatcacatgggcccaatgtcagagaggaggcatgatcag
aacagtggtcccgatcatggtcctgagagagggccattccgagctggccaggactgtagg
ggtccccctgatagacgtgggcctcacccagattttcctgatgatttcaaccgaccagat
gactttcaccctgataagcgatttggccatagattacgtgaatttgagggaagaggtgga
cctttgccacaagaggagaaatggaggcgagggggcccaggtcctccatatcctccagat
caccgagaattcaatgagggagatggccggggagcaaatcgtggccccccaggtgcgtgg
gaaggacgaagacctgcagatgagagatttcccagggatccagatgacccgcgttttaga
ggaagacgggaagaaagctttagaagagggggtgcacctcaacggcatgagggtcggggt
ccaccccgaggaagggaaggttttcctggtcctgaagactttgggccagaggaaaatttt
gatgcatcagatgaggctacaaggggaagagatcttagaggccgaggccgaggtactcca
cgaggaggacggaagggtttacttcccacaccagatgaatttcctagatttgaaggagga
cggaaaccagactcatgggatgcaaatagagagccaggccatgagcatttccgggatggt
ccacgttctgatcatcctcctcatgatgggcattctcctgccagcagagaacgctcttcc
tctctccaaggcatggatatggcttctttaccaccccgaaagcgtccctggcatgatgga
cctggaacatctgaccacagagaaatggaggctccaggtggaccttcagaggatcgaggc
aaaggacgaggtggcccaggaccatcccagagagtgccaaaatctggacgatccagttcc
ttggacggagatcatcatgatggatatcacagagatgaaccttatgggggtcctcaaagc
agtggcaccccttccagaggaggaaggagtggaagtaactgggggagaggaaataatatg
aactctggcccaccacggcgaggagcatcaagaggtggtggaaggggccggtag

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