Phascolarctos cinereus (koala): 110194849
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Entry
110194849 CDS
T05867
Symbol
DDX1
Name
(RefSeq) ATP-dependent RNA helicase DDX1 isoform X1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
pcw
Phascolarctos cinereus (koala)
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcw03041
]
110194849 (DDX1)
03016 Transfer RNA biogenesis [BR:
pcw03016
]
110194849 (DDX1)
Enzymes [BR:
pcw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110194849 (DDX1)
Spliceosome [BR:
pcw03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
110194849 (DDX1)
Transfer RNA biogenesis [BR:
pcw03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
110194849 (DDX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
SNF2-rel_dom
CMS1
DUF5766
DUF4882
Motif
Other DBs
NCBI-GeneID:
110194849
NCBI-ProteinID:
XP_020823077
UniProt:
A0A6P5ILR6
LinkDB
All DBs
Position
Unknown
AA seq
740 aa
AA seq
DB search
MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVYETLKDQQEGKKGKTTVKTGAAVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH
GCRSTKGVMKGKHYYEVSCHDQGLCRVGWSTAQASLDLGTDKFGFGFGGTGKKSHNKQFD
NYGEEFTMHDTIGCYLDVDKGQVKFSKNGKDLGLAFEIPAHLKNQAFFAACVLKNAELKF
NFGEEEFKFPPKDGFVGLCKASDGHVVKSQHTGSAQVAQTKFLPNAPKALIVEPSRELAE
QTLNNVKQFKKYVDNPKLRELLIIGGVAARDQLSVLEQGVDIVVGTPGRLDDLVSTGKLN
LSQIRFLVLDEADGLLSQGYSDFINRIHNQIPQITSDGKRLQVIVCSATLHSFDVKKLSE
KIMHFPTWVDLKGEDSVPETVHHVVVPVNPKTDRLWERLGKNHIRTDEVHAKDNTRPGAN
SPEMWSEAIKILKGEYTVRAIKEHKMDQAIIFCRTKIDCDNLEQYFMQQGGGPDKKGHQF
SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV
HRIGRVGRAERMGLAVSLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLS
EIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGTYKGHVDILAPTVQELAALEK
EAQTSFLHLGYLPNQLFRTF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcggccttctcagaaatgggtgttatgcctgagattgctcaagctgtggaggagatg
gattggctcctcccaactgatatccaggctgagtccatcccattgattctaggaggaggt
gatgtgcttatggccgcagaaacaggaagtggaaagactggtgctttcagtatcccggtc
atccagatagtgtatgaaaccctgaaagaccagcaggagggcaagaaagggaagaccacc
gtgaaaaccggggctgcagtgctcaacaaatggcagatgaacccgtatgacagaggatcg
gcttttgcaatcgggtcggacggtctttgttgccagagccgagaagtaaaggaatggcat
gggtgtcggtcgactaaaggagtgatgaaaggaaaacactactatgaggtgtcctgtcac
gaccaaggcttgtgcagagttggatggtcgactgcccaggcttccctcgatttgggtacc
gacaagtttggctttggctttggtggaactgggaaaaaatcccataacaaacagtttgac
aattatggagaggaattcactatgcatgatacaattggatgttacctggatgttgacaaa
gggcaggtcaagttctccaaaaatggaaaagaccttggtctagctttcgaaataccagcc
catttgaagaaccaagcgttctttgctgcatgtgtcttaaagaatgctgaactgaaattt
aactttggtgaagaagaatttaaatttccccccaaagatggatttgttgggctctgcaag
gcttccgatggccatgttgtgaaatctcaacacacaggaagtgcacaggtggcgcagacc
aagtttcttcccaacgctcccaaagccctcatcgtggagccgtcccgggagttggcagaa
cagactttgaataatgtcaagcagtttaaaaaatacgtggataacccgaagctgagggag
cttctgataatcggtggtgtggcagcccgggatcagctttctgtcctggagcagggggtg
gatattgtggtcggcactccggggagactggatgacttggtgtccacggggaaactcaac
ttatcccagattcgattcttggttctggatgaagccgacgggcttctttcccagggctat
tcggacttcattaataggattcacaatcagattcctcagattacttctgatggaaaaaga
cttcaggtcattgtctgctcggccaccctccactctttcgatgtcaagaagctttcggaa
aagatcatgcatttcccgacgtgggttgatttgaaaggggaggattcggtccccgagacg
gtgcaccacgttgttgttcctgtgaatcccaagacggacagactgtgggagaggctaggc
aaaaaccacatccgtactgacgaagtccatgcaaaagataacaccagacctggcgccaac
agccccgagatgtggtctgaggccataaagatcctgaagggggaatacacggtgcgggcc
atcaaagagcacaagatggatcaggcgatcatcttctgtcggaccaagatagactgtgac
aacctggagcagtatttcatgcagcaaggaggaggtccggacaagaagggacaccagttc
tcctgtgtttgtcttcacggggaccgaaagcctcatgagaggaagcagaacttggagaga
tttaagaaaggagatgtacggtttctgatttgcaccgacgtggctgccagaggcatcgat
atccatggggtcccttacgtcataaatgtcaccctgcctgatgaaaagcagaactacgtc
catcggattggccgcgtcggccgagcagaacgaatggggctggctgtgtccctggtggcg
accgaaaaggagaaggtttggtaccacgtgtgcagcagccgtgggaaggggtgctataac
acgaggctgaaggaagatggcggctgcaccatctggtacaacgagatgcagctgctctct
gagattgaggaacacctgaactgcaccatctctcaagtcgaaccagacatcaaagtccct
gtggacgaatttgatgggaaggtgacctacgggcagaagagagcggctggaggtgggacc
tacaaaggccatgtggacattttggctcctacagtccaagagctggctgcccttgaaaag
gaggctcagacttccttcctgcacctcggctaccttcccaaccagcttttcaggaccttc
tga
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