KEGG   Phascolarctos cinereus (koala): 110194875
Entry
110194875         CDS       T05867                                 
Symbol
SDC1
Name
(RefSeq) syndecan-1 isoform X1
  KO
K06257  syndecan 1
Organism
pcw  Phascolarctos cinereus (koala)
Pathway
pcw04512  ECM-receptor interaction
pcw04514  Cell adhesion molecules
pcw04820  Cytoskeleton in muscle cells
pcw05144  Malaria
pcw05205  Proteoglycans in cancer
pcw05418  Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:pcw00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    110194875 (SDC1)
   04514 Cell adhesion molecules
    110194875 (SDC1)
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    110194875 (SDC1)
 09160 Human Diseases
  09161 Cancer: overview
   05205 Proteoglycans in cancer
    110194875 (SDC1)
  09174 Infectious disease: parasitic
   05144 Malaria
    110194875 (SDC1)
  09166 Cardiovascular disease
   05418 Fluid shear stress and atherosclerosis
    110194875 (SDC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pcw04131]
    110194875 (SDC1)
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:pcw04090]
    110194875 (SDC1)
   00535 Proteoglycans [BR:pcw00535]
    110194875 (SDC1)
Membrane trafficking [BR:pcw04131]
 Exocytosis
  Calcium ion-dependent exocytosis
   Acrosomal exocytosis proteins
    110194875 (SDC1)
CD molecules [BR:pcw04090]
 Proteins
  110194875 (SDC1)
Proteoglycans [BR:pcw00535]
 Cell surface proteoglycans
  Syndecan family (transmembrane HSPG)
   110194875 (SDC1)
SSDB
Motif
Pfam: Syndecan
Other DBs
NCBI-GeneID: 110194875
NCBI-ProteinID: XP_020823120
UniProt: A0A6P5IM96
LinkDB
Position
Unknown
AA seq 296 aa
MPGVAVALLGLCALALCGQPALSQIMGTNTPPEDLDGSGDDDDAFSGSGAGASLETPLLD
LRLLSRKTAVLTTTLTAAPAEPTHASPGQASAVEREASGEGSAGLPGRGPEAESAPSHEP
THSSPAVTLPSTAHRPLTVGATTASDPSVVEPRVSTPEPPSSGGEGPLASGAPESDGQPD
RGSTQHLGEESSGSGSDDFTFAPSGEKPASPLERNKPDQEVIEGEATGASQGILDRKEVL
GGVIAGGLVGLLFAVFLVGFMLYRMKKKDEGSYSLEEPKQANGAYQKPQRQEEFYA
NT seq 891 nt   +upstreamnt  +downstreamnt
atgcccggcgtggcggtggcgctgctggggctgtgcgccctggcgctctgtgggcagccg
gctctctcgcagatcatggggacaaacacccctccagaggatcttgacgggtctggtgat
gatgacgatgccttctccggctctggggcgggggcctctctggagacgccgctgttggac
ctgcgcctcctgtccaggaagacggctgtgctcaccaccaccttgacggctgctccggcc
gagcccacgcacgccagcccagggcaagcatccgcagtcgaacgagaagcctcgggagag
ggatcagcgggcctgcctggaagggggcctgaggcagagtctgcccccagccacgagccc
acccactcatctcctgcagtgacgcttccttccaccgcccaccgtcctttgacggtagga
gccaccacggcctcagatcccagcgtggtggaaccaagggtgtctacacccgagcccccg
agctctggaggtgaaggccccttggccagtggcgctccagaaagtgacggccagccggac
agaggctcaactcagcatctaggagaggagagctcaggaagcgggagcgatgacttcacc
ttcgccccctctggagagaagcctgcctcccccctggagaggaacaaacctgaccaggaa
gtgatcgagggtgaagccacaggagcctcccagggcatcctggaccggaaggaggtttta
ggaggggtcattgctggaggcctcgtgggcctgctctttgccgtcttcctggttggattc
atgctctaccggatgaagaagaaggatgaaggcagctactccctggaggagccaaagcag
gccaacggtgcctaccagaagcctcagcggcaggaagagttctacgcctga

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