Phascolarctos cinereus (koala): 110194940
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Entry
110194940 CDS
T05867
Symbol
RC3H2
Name
(RefSeq) roquin-2 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
pcw
Phascolarctos cinereus (koala)
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcw03000
]
110194940 (RC3H2)
04121 Ubiquitin system [BR:
pcw04121
]
110194940 (RC3H2)
Transcription factors [BR:
pcw03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
110194940 (RC3H2)
Ubiquitin system [BR:
pcw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110194940 (RC3H2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-CCCH
zf-RING_UBOX
zf-RING_2
zf-CCCH_4
zf-C3HC4_3
Prok-RING_4
zf-C3HC4
zf_CCCH_4
zf-CCCH_UNK
zf-C3HC4_4
zf-C3HC4_2
Xin
Motif
Other DBs
NCBI-GeneID:
110194940
NCBI-ProteinID:
XP_020823205
UniProt:
A0A6P5IMG4
LinkDB
All DBs
Position
Unknown
AA seq
1211 aa
AA seq
DB search
MPVQAAQWTEFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPFDQTAINTD
IDVLPVNFALLQLVGAQVPDHQTVKLSNLGENKHYEVAKKCVEDLALYLKPLSGGKGVAS
LNQSALSRPMQRKLVTLVNCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLSANL
WAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIG
HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIAMEAGLRISPEQW
SSLLYGDLAHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLNRLRPHLELLANI
DPNPDAVSPTWEQLENAMVAVKTVVHGLVDFIQNYSRKGHETPQPQPNSKYKTSMCRDLR
QQGGCPRGTNCTFAHSQEELEKDIIFPLRTALAAPPKFWYRLRNKKITATVRTFPLLNKV
GVNNTVTTTAGNVISVIGSTETTGKLVPSTNGISSTENSVSQLIPRGADTTLRALENVKK
VGKVGSSSQNISGASAESVTENKIGSPPKTPVSNVAATSAGPPTVGTELNSVPPKSSSFV
TRVPVYPQPSESIQYFPDPRTQISFEVPQYPQTGYYPPPPTVPAGVAPCVPRFVRSNNVP
ESSLPPASVPYADHYSTFPPRDRVNSSPYQPPPPQPYGPVPPVPSGMYAPVYDSRRIWRP
PMYQRDDIIRSNSLPPMDVMHSSVYQTTLRERYSSSLDGYYPMACQPPSEPRTTVPLPRE
PCGHLKTSYEDQLRRKPEQWAQYHTQKAPLVSSTLPMATQSPTPPSPLFSVDFRTEFSEN
ISDVRGTKFEEDHLSHYSPWSCGTIGSCINAIDSEPKDVIANSNAVLMDLDSGDVKRRVH
LFETQRRAKEEDPIIPFSDGPIISKWGAISRSSRTGYHTTDPIQATASQGSATKPISVSD
YVPYVNAVDSRWSSYGSDSTSSAHYIERDRFIVTDLSSHRKHSSTGDLLSIELQQAKSNS
LLLQREANALAMQQKWNSLDEASHLTLNLLSKEMELRNGESDYTEDTADTKPDRDIELEL
SALDTDEPDGQGEQIEEILDIQLGITSQNDQLLNGTTVENGHPLKQHPKEPVEPKRQSLG
EDHVILEEQKAVLPVTSCFSQPIPASVSSAGCLPVTTSVSVSNLILKTAHIMSEDKNDFL
KPVANGKMVNS
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgcaggctgctcagtggacagaattcctgtcctgtccaatctgctataatgaa
tttgatgagaatgtgcacaagcccatcagtttaggttgttcacacaccgtctgcaagacc
tgcttaaataaacttcatcgaaaagcatgcccttttgaccagactgccatcaacacagac
attgatgtgcttcctgtaaactttgcacttctccaattagttggagcccaggtaccagat
catcaaacagtaaaattaagtaatctaggagagaataagcactatgaggttgcaaagaag
tgtgttgaggatttggctctctacttaaaaccactaagtggaggaaagggtgttgctagt
ttgaatcagagtgcactgagccgtccaatgcaaaggaaactggtgactcttgtgaattgt
caacttgtggaagaagaaggtcgtgtaagagccatgcgagcagcacgatcacttggggaa
agaactgtaactgaactgattttacaacaccagaaccctcagcagttgtctgccaatcta
tgggctgccgtcagggctcggggatgccagttcttaggaccagctatgcaagaagaggcc
ttaaagttggtattgctggctctggaagatggttctgctctctcaaggaaagttttggta
ctttttgttgtccaaagactggaaccaagatttcctcaggcatcaaaaacaagtattggt
catgttgtgcagctactgtatcgtgcttcttgttttaaggtcacaaaaagggatgaagat
tcttctctgatgcagctaaaggaagaatttagaagttatgaggctttgcgaagggagcat
gatgcccagatagttcatattgctatggaagcagggcttcgtatatcaccagaacagtgg
tcttcacttctctatggtgatttggcacataaatcacatatgcagtccatcattgataag
cttcagtctccagaatcctttgcaaagagtgtccaggagttgacaattgttttgcaacgt
acaggtgatccagcaaacctaaaccgattgaggcctcatttggaacttcttgcaaacata
gatcctaatccagatgctgtctcaccaacttgggagcagctagaaaatgcaatggttgct
gtcaagacggtggtacatggacttgtggactttattcagaactacagtcgtaaaggccat
gagacaccacagcctcagccaaatagcaaatataaaactagtatgtgccgagatctgcga
cagcaggggggatgcccacgaggaacaaattgtacgtttgctcattctcaggaagagctt
gaaaaagatataatttttcctctgaggactgctttagctgcacccccaaaattttggtat
cgtttaaggaacaaaaagatcacagcaactgtacgaacatttcctctcctgaataaagtt
ggtgtgaacaacactgtcacaaccacagctggaaatgtcatttctgtcataggaagtact
gaaacaactgggaaacttgttccaagtaccaatgggatttcaagtacagaaaacagtgtt
tcccagctaatcccccgtggtgctgacaccacactaagagctctggagaatgtgaagaaa
gtagggaaggttggctccagtagtcagaatatctctggggcttctgcagaatctgtaact
gaaaataaaattggttctccacccaagactcctgtaagtaatgtagcagctacctcagct
gggccccctactgttggaacagagctgaattctgtgcctccgaaatccagctcatttgta
actagagtacctgtatatcctcagccctctgaaagcattcagtattttccagatccaagg
acccagatatcctttgaagttccacagtatccacagacaggatactacccaccacctcca
acggtaccagctggtgtggctccctgtgttcctcgttttgtgaggtccaataatgttcca
gaatcttccctcccacctgcttccgtgccatatgctgatcattacagtacatttccccct
cgagatcgagtgaattcttctccttaccagcctcctcctccgcagccgtatggaccagtt
cccccagtaccttccggaatgtacgctcctgtgtatgacagccggcgcatctggcgtcca
ccaatgtaccagcgagatgacattattaggagcaattctttacctccaatggatgtgatg
cattcgtctgtctatcagacgactttgcgagaaagatatagtagttccctggatggttat
tatccaatggcttgtcaaccaccaagtgagccaaggacaactgtacctttaccaagggaa
ccttgtggtcatttgaagaccagttatgaggatcagttaagacgaaaaccagaacagtgg
gcgcaatatcatacccagaaagcaccccttgtttcttcaactcttcctatggcaacacag
tcaccgacaccaccttctcctctgttcagtgtagactttcgtactgagttctccgagaac
ataagtgacgtgcgtggtacaaaatttgaggaagatcatctttcccattattcaccctgg
tcctgtggcaccataggctcttgtataaatgccattgattcagagcccaaggatgtaatt
gctaattcaaatgctgtgttaatggatctggacagtggagatgttaagagaagagtacat
ttatttgaaactcagagaagggcgaaagaagaagatcctataattccttttagtgatgga
cccattatctccaaatggggtgcaatttccagatcttcccggacaggttaccataccaca
gatcctatacaggctactgcttcccaaggaagtgctactaaacccatcagtgtatcagat
tatgtcccctatgtcaatgctgttgattccaggtggagttcatatggctctgattctact
tcttcagcacactatatagaacgggatagatttattgttactgatttatccagtcataga
aagcattccagtactggagatcttctaagcattgaacttcagcaggcaaagagcaactca
ttgttgcttcagagggaggccaatgcactagccatgcaacagaaatggaattccttagat
gaagccagtcaccttaccttaaatctcctaagcaaggaaatggaattgagaaatggagag
agtgattatacagaagatacagcagatactaagcctgatcgagatattgaattagaactt
tcagcacttgacactgatgaacctgatggacaaggtgaacaaatagaagagattctggac
atacaacttggtatcacatctcaaaatgatcagctactgaatggaactacagtggaaaat
ggccacccactaaagcaacacccaaaggaaccagtggagcccaagagacaaagtttaggt
gaagaccatgtgattctggaggaacaaaaagcagtcctgccggtaacttcttgcttcagc
cagccaatcccagcatcagttagcagtgcaggttgcctgccagtcaccacatctgtcagt
gtcagcaatctcatcttgaaaacggctcatattatgtctgaggataaaaatgacttttta
aagccagttgcaaatgggaagatggttaacagctga
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