Phascolarctos cinereus (koala): 110195016
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Entry
110195016 CDS
T05867
Symbol
NUP98
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear pore complex protein Nup98-Nup96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
pcw
Phascolarctos cinereus (koala)
Pathway
pcw03013
Nucleocytoplasmic transport
pcw05014
Amyotrophic lateral sclerosis
pcw05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110195016 (NUP98)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
110195016 (NUP98)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
110195016 (NUP98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcw03019
]
110195016 (NUP98)
03036 Chromosome and associated proteins [BR:
pcw03036
]
110195016 (NUP98)
Messenger RNA biogenesis [BR:
pcw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110195016 (NUP98)
Chromosome and associated proteins [BR:
pcw03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
110195016 (NUP98)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
110195016
NCBI-ProteinID:
XP_020823325
UniProt:
A0A6P5IMQ4
LinkDB
All DBs
Position
Unknown
AA seq
1798 aa
AA seq
DB search
MFNKSFGTPFGSGAGGFGTTSTFGQNTGFGTTSGGAFGTSAFGSNNNTGGLFGNTQTKPG
GLFGSNSFSQPATSSTSTGFGFGTSTGTSNSLFGAASTGASLFSSQNNAFAQNKPTGFGN
FGTSTSSGGLFGTTNTTSNPFGGTSTSLFGPSSFTAAPTGTTIKFNPPTGTDTMVKAGVS
TNISTKHQCITAMKEYESKSLEELRLEDYQANRKGPQNQVGAGATTGLFGSSTATSSTTG
LFGNSTTNAGFAYGPNKTGFGTSTTGFGTNTGSLFGQPTQPTTSLFSKPFGPAATTQSTG
FSFGNTNTLGQPNTNTMGLFGGTQASSGSLFGTATNTSAATGFGTGTGLFGPTNTGFGAV
GSTLFGSNKPAAFGTTTTSAPSFGTTSSGLFGFGGSGNIFGNKPAPGTLGTGLGTGFGTG
TALSAGQASLFGTNQPKIGTGTLATGAFGTPGFNATTATLGFGAPQAPVALTDPNASAAQ
QAVLQQHINSLTYSPFGDSPLFRNPMSDPKKKEERLKPTNPAAQKALTTPTHYKLTPRPA
TRVRPKALQTAGTAKSHLFDGLDDDEPSLANGAFMPKKSIKKLVLKNLNNSNLFSPVSRD
AEDLAXPSDYPENGERFSFLSKAVDENHQQDGDDDSLVSRFYTNPIAKPIPQTPENAVNK
HHSSVDDSIVVLNMRGALRNGLEGSSEEASFHDESLQDDREEEEESAYHIHPAGIILTRV
GYYTIPSMDDLAKITNEKGECIVTDFTIGRKGYGSIYFEGVVNLTNLNLDEIVHIRRKEV
IVYLDDELKPPVGEGLNRRAEVTLDGVWPTDKTSRCLIKSPERLADINYEGRLEAVSRKQ
GAQFKEYRPETGSWVFKVSHFSKYGLQDSDEDEEEHQSKAEAKKLKTAPMPPVGQPVPLQ
MALSGKPALPSQSQSPEVEQLGRVVELDSDMIDITQEPVLDSIVEEIIPEEQEPVSASTH
IASSLGINPHVLQIMKASLLAEEEDADWVLDQRFGKLPSKVDPSQEICSPRLPISSAHPP
KSRTLVGGLLQSKLTSGAFLSPSASVPECRIPRTSSLTSAPSTSPWSVPPPLAPVFAVPT
PAPEVQLKTVGARRQPGLVPLEKSVTCGKGKLLMDMALFMGRSFRVGWGPNWTFVNSGDQ
LSGFQEPGDHHNTESMEYGFLPNPITVKSLTESPFKVHVEKLSLRQKRMDRDLQLYQTPL
DIKLKHSTVHVDELCPVVVPNPGVAVIHDYADWVKEISGDLAESETVVKHWSLTWTLCEA
IWGHLKELEDQLDEPSEYVQSLERRRAFSRWLSQTAADHIEEEVALSRQDNPVEAVFSYL
TGKRISEACRLAQQIGDHRLALLLSQLGGSQPVRELLTMQLVDWHRLQADCFIQEDRLRI
FTLLAGKPVWRLSEQKSINVCSQLDWKRSIAVHFWYLLPPTASISQALSMYEEAFQNTSE
SEKYACSPLPSYLEDSGCVLEDDNTRRPLRDVCFHLLKLYSDRHYDLNQLLDPQSITSDP
LDYRLSWHLWEVLQALNYTHLSEQCEGVLHASYAAQLESEGLWEWAIFVLLHITNTSMRE
KAVRELLTRHCRLSETPESWAKESFLTQKLCVPAEWIHEAKAVRAHMECDQHLEALYLFK
AGHWNHCHKLVIRHLASDAIINENYSYLKGFLEDLSPPERSSLIQDWDTAGLVYLDYIRV
IEMLSRIQQLDCPGYELEKLHTKVTSLCNRIEQIHCSNAKDRLAQSDMAKRVANILRVVL
SLQQAPDGAPDSPADLQRVPLRLLAPHIGRLPMPEDYALEELRSLTQSYLRELTVGSQ
NT seq
5397 nt
NT seq
+upstream
nt +downstream
nt
atgtttaataagtcatttggaactccctttgggagtggagctggtggttttggtacgact
tcaacatttggacagaatactggttttggtaccacaagtggaggggcatttgggacatct
gcatttggttccaacaacaatactggaggcctctttggaaacacacagactaagccggga
ggcttgtttgggtcaaattcgtttagccagccagctacctcctctacaagcactggcttt
ggatttggaacatcaacagggacatcaaatagcttgtttggagctgctagcacaggagca
agtctcttctcatcccagaacaatgcctttgcacaaaataaacctactggttttggaaat
tttggaacaagcactagcagtggaggtctttttggaaccacaaatacaacttccaatccc
tttggtggcacatccacttccctttttggacccagtagttttacagcggctcctactgga
accacgataaagtttaatcctccaactggcacagatactatggtcaaagctggagttagc
accaacattagtaccaaacaccaatgtatcactgctatgaaagaatatgaaagcaaatca
ctggaggaacttcgtttggaagattatcaagctaacaggaagggtcctcagaaccaggtg
ggagcaggtgccaccacagggctgtttggctcttctacagcaacttccagcaccacaggc
ctctttggaaactctaccactaatgcaggttttgcatatgggccaaataaaactggcttt
gggacaagtacaactggatttggaacaaatacaggtagcctctttggtcagccaactcaa
ccaaccaccagccttttcagtaagccatttggccctgctgcaaccacccagagtactggc
ttttcatttgggaataccaacactcttggacagccaaacaccaacacaatgggtttattc
gggggaactcaagcctcatctggaagtctttttgggacagctacaaacacgagtgctgct
actggatttggaacaggaacaggcctctttgggccaaccaacacaggatttggtgctgtt
ggttcgaccctgtttggcagtaacaagcctgctgcatttggaactactacaaccagtgct
ccttcgtttggtacaaccagtagcgggctctttggttttggtggaagtgggaatattttt
ggaaataagccagcacctggtactcttggaacaggacttggaacaggctttggaacggga
acagctcttagtgccgggcaggcatctttatttggaaccaaccagcccaagatagggacg
gggaccttggccacaggagcttttggaactcctggatttaatgctaccacagccaccttg
ggttttggtgctcctcaggctcctgtagctttgacagatccgaatgcttctgctgctcag
caggctgttctccagcagcatatcaatagtctgacgtactcaccatttggagactctcct
ctcttccggaatccaatgtcagatcctaagaagaaagaagagaggttgaagcccacaaac
ccagctgcacagaaggctttgaccacccctactcactataaactgacacctcgccctgcc
actagagtccgacctaaggctctgcagacagcagggacagccaaatcccacctcttcgat
gggctagatgatgatgagccatctctagccaatggagccttcatgcccaagaagagtatc
aagaagttagttttaaagaatctcaacaatagcaacctcttttctcctgttagtcgggat
gctgaagatctggccntaccatcagattatccagagaatggggagagatttagttttctc
agcaaagctgttgatgagaaccatcagcaggatggggatgatgactctcttgtgtcacga
ttctacactaaccccattgcgaaacccatcccgcaaactcctgagaatgcagtaaataaa
catcacagcagtgtggatgattccattgttgtgctgaacatgcgtggtgccttacgaaat
ggcctggaaggaagcagtgaagaggcctctttccatgatgagtctctgcaggatgatcgg
gaagaagaagaggaaagtgcttaccatatccatccggcaggcattattctcaccagagtt
ggctactatacgataccttctatggatgatttagccaaaattaccaatgaaaagggagag
tgtattgtaacagatttcaccataggtcgtaaaggttatggctcaatctattttgaagga
gtggtgaatttaactaacctcaacttggatgaaattgtacatattcgtagaaaagaagtc
attgtctacctggatgatgagctgaagcctcctgtgggagaagggctaaataggcgggct
gaagttaccttggatggagtttggccaactgacaaaacctctcgttgcttaataaagagt
cctgaacgactagctgatatcaattatgagggccggttagaagctgtttcacgaaaacaa
ggtgcccagttcaaggagtaccggccagagactggttcttgggtatttaaggtctcccac
ttctcaaagtatggcctacaggattctgatgaggatgaggaggagcatcaatctaaagca
gaagcaaagaagttgaaaacagctcccatgccccctgtaggccagccagtaccactacaa
atggctctcagtggcaaacctgctcttccatcccagagccaaagcccagaggtggaacag
ctagggagggttgtggagctggacagcgatatgatagatatcacccaggagccagttttg
gattccatagtagaagaaatcatccctgaagagcaagagcctgtgtccgcttcaacacac
attgcatcttcactgggtattaacccacatgttttacagatcatgaaagcatctttgctt
gctgaggaagaagatgcagattgggtccttgatcagcgctttggcaagcttccttccaaa
gtagacccttctcaagaaatctgttctcccagacttcccatttcatcagcacacccacca
aaatcccgaacattagttggtggtttactacagtcaaagcttacaagtggagcttttctc
tcgccaagtgcctctgtgccagaatgtcgaattcccagaacttcatctttaacaagtgcc
ccttctacatctccttggtcagtccctccaccactggcccctgtgtttgcagtgcccacc
ccagcgcctgaggtccagttaaaaactgtgggtgctcgaagacagccaggacttgttccc
ctggaaaagtctgtcacctgtggcaaaggaaagcttttgatggatatggcactcttcatg
ggacgttcattccgggttggctggggccccaactggacctttgtcaatagtggtgatcag
ctgagtggatttcaggaacctggagatcatcacaacactgaatctatggaatatggattc
ctgcctaacccaataactgtcaaatcactaacagagtccccattcaaagtccatgtggaa
aaactgagcttgagacaaaagaggatggatagagatttacagttataccagactcccctg
gacatcaagcttaagcacagcactgtccatgtggatgagctgtgtcctgtcgtggtcccc
aatcctggagtagccgtcattcacgactatgcagactgggtgaaagagatatcaggagac
ttagcagaatcagaaactgtagtaaagcactggagcctgacgtggacactctgtgaagcc
atctggggtcacctgaaggaactagaggatcagctggatgagcccagtgagtacgtgcag
agcctggagcgccgaagggctttctcccgttggctgtcacagacagcagctgatcatatt
gaggaggaagtagccctgtcccgacaagacaatcctgtggaggcagtcttcagctacctc
acaggcaagaggatcagtgaggcctgccgtctggcccagcaaataggggatcaccgactc
gcccttcttctatcccagctggggggcagccagccagtccgggagctgctcaccatgcaa
ctggtagattggcatcggctccaggcagactgcttcatccaggaggatcgactacgcatt
tttactctcttggctggaaaaccagtatggcgactctcagaacagaagagtatcaatgtc
tgttcccagctggattggaagcgctcaattgctgtccatttctggtacctccttcctcct
actgcttccatttcccaggctctcagcatgtatgaggaagcattccagaacacctctgaa
agtgaaaaatatgcctgtagtcccctgccttcatatcttgaagactctggctgtgtgttg
gaagatgacaatacaaggagacctcttagagatgtgtgttttcacctccttaagctctac
agtgacagacattatgatctgaatcaactgttggatcctcagagtataacctctgatcct
ttggactatcgcttgagctggcacctctgggaagtcctacaggccctgaattatacccac
ctgtctgagcagtgtgaaggtgtgctgcatgccagctatgctgctcagctcgagagtgaa
ggactatgggagtgggccatctttgtcctactgcatatcactaacacaagtatgcgtgag
aaggcagtacgggagctactcactcggcactgcagactgtcagagacccctgaatcctgg
gccaaggaatccttcctgacccagaagctgtgtgtgcctgctgagtggatccatgaggcc
aaggctgtgcgtgcccatatggaatgtgaccagcacctggaggccctctacctattcaaa
gctggacactggaaccactgccacaaactggtcatcaggcatttggcctctgatgccatt
attaatgagaactacagctacctaaagggattcctggaagacctatctcccccagagcgc
agcagccttattcaggactgggacaccgctggactagtttatctagattacatccgggtc
atcgaaatgctcagccgaattcagcagctcgattgtccaggctatgaactagagaaattg
cataccaaagtgacctctctttgtaaccggatagagcagattcactgttccaatgccaag
gaccgactggcccagtcagacatggccaagcgtgtggccaacatccttcgggttgttttg
agccttcagcaggccccagatggagccccggattcacctgcagacctgcagcgtgtccct
ctgcgcttgctggctccccacattggccggctccccatgcccgaggactatgccttagag
gagctgcgtagcctcacacagtcctacctccgagaactgaccgtggggagccagtga
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integrated database retrieval system
