Phascolarctos cinereus (koala): 110195107
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Entry
110195107 CDS
T05867
Symbol
TAF5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
pcw
Phascolarctos cinereus (koala)
Pathway
pcw03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110195107 (TAF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcw03021
]
110195107 (TAF5)
03036 Chromosome and associated proteins [BR:
pcw03036
]
110195107 (TAF5)
Transcription machinery [BR:
pcw03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
110195107 (TAF5)
Coactivators
SAGA/TFTC/STAGA complex
110195107 (TAF5)
Chromosome and associated proteins [BR:
pcw03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
110195107 (TAF5)
STAGA complex
110195107 (TAF5)
TFTC complex
110195107 (TAF5)
SAGA complex
110195107 (TAF5)
SLIK complex
110195107 (TAF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
NBCH_WD40
WDR55
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_SPT8
WD_LRWD1
Beta-prop_DCAF12
Beta-prop_Nup120_160
CDK5RAP3
Beta-prop_RIG_1st
RAB3GAP2_N
eIF2A
Cytochrom_D1
VPS8_N
Motif
Other DBs
NCBI-GeneID:
110195107
NCBI-ProteinID:
XP_020823411
UniProt:
A0A6P5IWS3
LinkDB
All DBs
Position
Unknown
AA seq
820 aa
AA seq
DB search
MAALAEEQTEVVIKPDPEGPPALPATQPGDCPGEGSGGSHNSSHNGGGGGGVAASSAGGD
GGTPKPAVAPPAAAAAAATAAPGGAAGAPAAAAEGIASQDRQTLLAVLQFLRRSNLRESE
EILRREARLLEEAAGAGAPGEMDGPGAEATSALLSRVAAAAGPTGPGPGSGSGPGPGACP
ASAGPAASGAGTGNSGAAPTAAAPAKVGVVAVEDQPDVSAVLSAYNQQGDPAMYEEYYSG
LKHFIECSLDCHRAELSQLFYPLFVHMYLELVYNQHENEAKSFFEKFHGDQECYYQDDLR
VLSSLTKKEHMKGNETMLDFRTSKFVLRISRDSYQLLKRHLQEKQNNQIWNIVQEHLYID
IFDGMPRSKQQIDAMVGSMAGEAKREANKAKVFFGLLKEPEIEVPLDDEDEEGENEEGKP
KKKKPKKDSMGSKSKKQDPNAPPQNRIPLPELKDSDKLDKIMNMKETTKRVRLGPDCLPS
ICFYTFLNAYQGLTAVDVTDDSSLIAGGFADSTVRVWSVTPKKLRSVKTATDLSLIDKES
DDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVG
YKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSN
YVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGRFLATGATDGRVLLWDIGH
GLMVGELKGHTDTVCSLKFSRDGEILASGSMDNTVRLWDAIKAFEDLETDDFTTATGHIN
LPENSQDLLLGTYMTKSTPVVHLHFTRRNLVLAAGAYSPQ
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctggcagaggagcagacggaggtggtgatcaagcctgacccggagggaccg
ccggctctccctgccacgcagccgggcgactgtccaggcgagggcagcggaggcagccac
aacagcagccacaacggaggcggcggcggcggtgtcgcggcgtcctcagccggcggcgat
ggcgggaccccgaagcccgccgtggctcctccggcagctgcggcggccgcggcgacagcg
gcccccgggggcgcggccggggctccggcagccgctgccgagggcatcgcctctcaggac
cggcagaccctgctggccgtgctgcagttcttgcggcggagcaacctacgcgagtccgag
gagatcctgcggcgcgaggcccggctgctggaagaggcggcgggagccggcgccccagga
gagatggacgggcccggggccgaggccaccagcgcgctcctgagccgggtcgccgccgcc
gccgggcccaccggcccgggccccggctcaggctccggccccggccccggcgcctgccct
gcgtccgcgggcccagccgcctcgggggccggcacggggaactcaggggccgccccgacc
gcggccgctccggccaaagttggagtagttgctgtagaagaccagcctgatgtcagtgca
gtgttgtctgcctacaatcagcaaggggatccagcaatgtatgaagagtattacagtgga
ctgaaacatttcattgaatgctccttggactgtcatcgagcagaattatctcagttattt
tatcctctctttgtacatatgtacttggaattggtctacaatcagcatgaaaatgaagca
aaatcattctttgagaagtttcatggcgatcaggaatgttattatcaggatgatctgcga
gtgttatctagccttaccaaaaaggagcacatgaaagggaatgagaccatgttggatttt
cgaacaagtaaatttgttttgcgcatttcccgggactcttatcaactcttgaaaagacac
cttcaggagaaacagaacaaccaaatatggaacatagtccaggagcacctgtacattgac
atcttcgatgggatgcctcggagtaagcaacagatagatgctatggtgggaagtatggcc
ggagaggcaaagcgagaggcaaataaggcaaaggttttttttggcttgttaaaagaacca
gaaattgaagttcctttggatgatgaagatgaagaaggggagaatgaggaaggaaagccc
aaaaaaaagaaacctaaaaaagacagtatgggatctaaaagcaaaaaacaagatcctaat
gctccacctcaaaacagaattcctcttcctgaattgaaagattcagataagttggataag
ataatgaatatgaaagaaaccacgaaacgtgttcgtcttggtccagattgtttaccttct
atctgtttctatacattccttaatgcctatcagggtctcactgcagttgatgttactgat
gattccagtctgattgcaggaggttttgctgactccactgtcagagtgtggtctgtgact
ccgaaaaagcttcgtagtgtgaagacagcaacagatctcagcctcatagacaaagaatca
gatgatgttttagaaagaatcatggatgagaaaacagcaagtgaattgaagattctatat
ggtcacagtgggcctgtttatggagcaagcttcagtcccgacagaaactacttgctttcc
tcctcagaagatggcactgttagactatggagtctccaaacattcacttgtttggtagga
tacaaaggacacaactatccagtgtgggacacacagttttctccatatggatactatttt
gtgtcaggaggacatgacagagtagctcggctgtgggctacagatcattaccagccttta
cggatatttgctggccaccttgctgatgtgaactgtacacggtttcatccaaactctaac
tatgttgctacgggttcagcagacagaacagtaaggctatgggatgtcttgaatgggaat
tgtgtaaggatcttcactggacataagggaccaattcattctttggcattttctcccaat
gggagattcctggctactggagcaacagatggcagggtccttctctgggatattggacat
ggcttgatggttggagaattaaaaggccatacagatacagtatgttcacttaagtttagt
agagatggagaaattttagcatcagggtcaatggataacacagttcgtttgtgggatgct
ataaaagcatttgaagacctagagactgatgattttactacagccactggacatataaac
ttgcctgaaaattcacaggatttactgttgggaacctatatgaccaagtcaacaccagtt
gtacatctccattttactcgaagaaacttggttttagctgcaggagcttatagtccacag
taa
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integrated database retrieval system
