Phascolarctos cinereus (koala): 110195314
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Entry
110195314 CDS
T05867
Symbol
CAPN1
Name
(RefSeq) calpain-1 catalytic subunit isoform X1
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
pcw
Phascolarctos cinereus (koala)
Pathway
pcw04141
Protein processing in endoplasmic reticulum
pcw04210
Apoptosis
pcw04217
Necroptosis
pcw04218
Cellular senescence
pcw04382
Cornified envelope formation
pcw05010
Alzheimer disease
pcw05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
110195314 (CAPN1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
110195314 (CAPN1)
04217 Necroptosis
110195314 (CAPN1)
04218 Cellular senescence
110195314 (CAPN1)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
110195314 (CAPN1)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
110195314 (CAPN1)
05022 Pathways of neurodegeneration - multiple diseases
110195314 (CAPN1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pcw01002
]
110195314 (CAPN1)
Enzymes [BR:
pcw01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
110195314 (CAPN1)
Peptidases and inhibitors [BR:
pcw01002
]
Cysteine peptidases
Family C2: calpain family
110195314 (CAPN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_7
CAPN13-like_C_EFh
Motif
Other DBs
NCBI-GeneID:
110195314
NCBI-ProteinID:
XP_020823663
UniProt:
A0A6P5IYL1
LinkDB
All DBs
Position
Unknown
AA seq
713 aa
AA seq
DB search
MTEEIITPVYCTGVSAQVQKQRAKELGLGCHENAIKYLGQDYEQLRSQYLQSGALFQDDT
FPPSSYSLGFKELGPNSSKTYGIKWKRPTELLSNPQFIVDGATRTDICQGALGDCWLLAA
IASITLNDTILHRVVPHGQSFQHGYAGIFHFQLWQFGEWIDVVVDDLLPTKDGKLVFVHS
AQGNEFWSALLEKAYAKVNGSYEALSGGSTSEGFEDFTGGVTEWFDLRKPPSDLYSIILK
ALERGSLLGCSIDITSVFDMEAVTFKKLVKGHAYSVTGAQQVNCRGRSVNLIRMRNPWGE
VEWTGPWSDSSSEWNQVDPSTRQRLQIKMEDGEFWMSFNDFLREFSRLEICNLTPDTLKS
NKFRKWNTTLYDGTWRRGSTAGGCRNYPATFWVNPQFKIKLEEMDDDRGGQSDRGCSFLL
ALMQKHRRRERRFGRDMETIGFAVYEVPEKLVGQPGVHLKRDFFLSHSSLARSEQFINLR
EVSSRLCLPPGEYIVVPSTFEPNKEGDFVLRFFSEKKAGTVELDDKIEAHLPDERVLSED
EIDDTFKNLFKQLAGVDMEISVKELQTILNRIVSKHKDLRTNGFSKESCRSMVNLMDRDG
NGKLGLVEFNVLWNRIKNYLDIFRKYDLDKSGSMSSYEMRMALEAAGYKLNKKLYELIIT
RYSEPDLAINFDNFVCCLVRLETMFRFFQSLDTDRDGIVNFDLLRWLQLTMFA
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgacagaagagatcatcacccctgtgtactgcacgggggtgtctgcccaagtgcagaag
cagagggccaaggaactaggcctgggctgccatgagaacgccattaagtacctgggccag
gactacgagcagctacggtcccagtaccttcagtctggggcccttttccaggatgatacc
ttccccccttcttcctattccctgggtttcaaggaactggggcccaactcctccaaaacc
tatggcattaagtggaaaaggcccacggaacttttgtcgaaccctcagtttatcgtggat
ggggccacccgaacagacatttgtcagggagcgctaggagattgctggctactggcggcc
atcgcctccatcaccctgaacgataccatcttgcaccgggtggtgcctcacgggcagagc
ttccagcatggctatgctggcatctttcatttccagctgtggcagtttggggagtggatc
gatgtagttgtggacgacctgctgcctaccaaggatgggaagctggtctttgtgcactca
gcccaaggcaatgagttctggagcgccctgcttgagaaggcctatgccaaggtgaatggt
agctatgaagccctttctgggggtagcacctccgagggctttgaagacttcactggaggc
gtgacagaatggtttgatctcaggaagcccccttctgatctctactccatcattctgaag
gccctggagcggggctccctgctgggctgttccatcgatatcaccagcgtgtttgacatg
gaagcagtcaccttcaagaagctggtgaagggccatgcctactctgtcactggcgcccag
caggtgaactgtcggggccgctcggtgaacctgattcgaatgcggaacccatggggtgag
gtagagtggacggggccttggagtgacagttcctctgagtggaaccaggtggacccctct
accaggcagcgactccaaatcaagatggaggatggggagttctggatgtccttcaatgac
tttctccgtgagttctcccgtctggagatctgcaacctgaccccagacaccctcaagtca
aacaaattccgcaaatggaacacgaccctgtatgatggcacctggcggcgcgggagcacg
gcaggcggctgcagaaactacccagctaccttctgggtgaatccccagtttaagatcaag
ctggaggagatggacgatgaccgcgggggtcaatcagacaggggctgcagcttcctcctg
gcgctgatgcagaaacacaggcgcagagagcgccgcttcggtcgggacatggagaccatt
ggctttgcagtctatgaagttcctgagaagttggtgggtcagcctggcgtgcacctgaag
cgggacttcttcctgtcccactcgtcactggcccgctcagagcagtttatcaacctacgg
gaggtcagctcacgcctgtgcctgcctcctggcgagtacattgtggtgccctccaccttc
gagcccaacaaggagggcgacttcgtgctccgcttcttctccgagaagaaggctgggacc
gtggagctggacgacaagatcgaagctcacctccctgatgagagagtgctctctgaagat
gagattgatgacaccttcaagaacctttttaagcagctggctggggtggacatggagatc
agtgtcaaggaactacagaccatcctcaacaggatcgttagcaaacacaaagacctccgg
actaatggcttcagtaaggagtcgtgccgaagcatggtgaatcttatggatcgagatggc
aatgggaaactggggttggttgagtttaacgtcctctggaaccgaatcaaaaattacctg
gacatcttcagaaagtatgacctagacaagtcaggcagcatgagctcctatgagatgcgg
atggctcttgaggcagcagggtacaagttgaacaagaagctgtatgaactgattatcacc
cgctactcggagcctgacctggccataaattttgacaactttgtgtgctgcctggtgcgc
ctggagaccatgttccgatttttccagagtctggatacagatagagatggaattgtgaat
ttcgacttacttaggtggttacagttgaccatgtttgcgtga
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