Phascolarctos cinereus (koala): 110195317
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Entry
110195317 CDS
T05867
Symbol
SYVN1
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
pcw
Phascolarctos cinereus (koala)
Pathway
pcw04120
Ubiquitin mediated proteolysis
pcw04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
110195317 (SYVN1)
04120 Ubiquitin mediated proteolysis
110195317 (SYVN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcw04121
]
110195317 (SYVN1)
Enzymes [BR:
pcw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110195317 (SYVN1)
Ubiquitin system [BR:
pcw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110195317 (SYVN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-ANAPC11
zf-RING-like
zf-HC5HC2H
zf-Nse
Endonuclease_7
Motif
Other DBs
NCBI-GeneID:
110195317
NCBI-ProteinID:
XP_020823670
UniProt:
A0A6P5INL6
LinkDB
All DBs
Position
Unknown
AA seq
594 aa
AA seq
DB search
MFRTAVMMAASLALTGAVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKV
MGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWLFHCRIVSLMLLLGALDFLFVNHAYHSILTRGASVQLVFGFEYAI
LMTMVLTIFIKYVLHSVDLQNENPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATAEELQAMDNVCIICREEMVT
GAKRLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRASLPAQSPAAPEPPEQGPPPAPHQP
PILPQPPNFPQGLLPPFPPGMFPLWPPMGPFPPMPPPSNADVPPVSPSTSANASRSTGSV
PEPTPSPGFPFPPPWMGMPLPPPFGFPPMPVPPAGFAGLTAEELQALEGHERHHLEARLQ
SLRNIHTLLDAAMLQINQYLTVLASLGPPRPPAPASPPAASTPAAAASSSSSIPSSEATP
PSPGASPLPPEPVQQQPGSSAESVGAEDLSEDAEPDAVELRRRRLQKLGSPACH
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgttccgcacggccgtgatgatggccgccagcctggcgctgaccggggccgtggtggcc
cacgcctactacctcaagcaccagttctaccctactgtggtctacctgaccaagtccagc
cccagcatggccgtcctctacatccaggccttcgtgctcgtctttctgctgggcaaggtg
atgggcaaggtgttcttcggccagctgagagctgccgagatggagcacctcctggagcgc
tcctggtatgcagtgactgagacctgcctggccttcacggtcttccgggatgacttcagc
ccgcggtttgtggcgctcttcaccctccttctcttcctcaagtgtttccactggctggct
gaggaccgggttgactttatggagcggagccccaacatctcctggctgtttcactgccgc
attgtctccctcatgctcctcctgggtgccctggacttcctctttgtcaatcatgcctat
cacagcatcctgacccggggggcctctgtgcagctggtctttggctttgagtacgccatc
ctgatgaccatggtcctcaccatcttcatcaaatacgttctgcactcagtcgatctccag
aacgagaacccctgggacaacaaggccgtctacatgctttacacagagttgttcacaggc
ttcatcaaagttctgctttacatggccttcatgacgatcatgatcaaggtgcacacgttc
ccgctctttgccatccggcccatgtacctggccatgaggcagtttaagaaggcggtgacc
gacgctatcatgtctcgccgagccatccgcaacatgaacacgctgtacccagacgccacg
gccgaggagctccaggccatggacaacgtctgcatcatctgcagggaggagatggtgacc
ggcgccaagcggcttccctgcaaccatatcttccacaccagctgcctgcgctcctggttc
cagcgacagcagacctgccccacgtgccgaatggacgtcctgcgcgcctcgcttcccgcc
cagtccccagccgccccggaacctcctgagcagggccccccacctgccccccaccagccc
cccatccttccccagccccccaactttccccaaggcctcctgcctccatttcctccgggg
atgttccctctgtggcctcccatgggcccctttccccccatgccaccccccagcaatgcc
gatgtcccgcctgtctccccttccacctcagccaatgcctctcggtccactggctctgtc
cctgagcccaccccgtctcctggttttcccttccctcctccctggatgggcatgcccctg
cccccgccatttggattcccccccatgccagtgcccccagcaggatttgcaggcctgact
gccgaggagctgcaggccctggagggccacgagcggcaccatctggaagctcggctccaa
agccttcggaacatccacaccctgctggatgctgccatgttgcagatcaaccagtacctc
actgtgctggcctccctgggccctccccgacctcctgcccctgccagtccccctgcggca
tctacacccgctgctgcggcctcctcttccagcagcattcccagttcggaggcgacaccc
ccctcaccgggagcctctccacttccccccgagcccgtgcagcagcagccaggttcatct
gctgagtctgttggggccgaggacctgtcggaagacgcggagcccgatgcggtggagctc
cgccgccgccgcctgcagaagctggggtcccctgcttgtcattga
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