KEGG   Phascolarctos cinereus (koala): 110195387
Entry
110195387         CDS       T05867                                 
Symbol
DDB1
Name
(RefSeq) DNA damage-binding protein 1
  KO
K10610  DNA damage-binding protein 1
Organism
pcw  Phascolarctos cinereus (koala)
Pathway
pcw03420  Nucleotide excision repair
pcw04120  Ubiquitin mediated proteolysis
pcw05161  Hepatitis B
pcw05170  Human immunodeficiency virus 1 infection
pcw05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:pcw00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    110195387 (DDB1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    110195387 (DDB1)
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    110195387 (DDB1)
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    110195387 (DDB1)
   05161 Hepatitis B
    110195387 (DDB1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pcw04121]
    110195387 (DDB1)
   03400 DNA repair and recombination proteins [BR:pcw03400]
    110195387 (DDB1)
Ubiquitin system [BR:pcw04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Adoptor protein
     110195387 (DDB1)
DNA repair and recombination proteins [BR:pcw03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      110195387 (DDB1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      110195387 (DDB1)
SSDB
Motif
Pfam: Beta-prop_RSE1_2nd CPSF_A Beta-prop_RSE1_1st Beta-prop_RIG_2nd Beta_propel
Other DBs
NCBI-GeneID: 110195387
NCBI-ProteinID: XP_020823788
UniProt: A0A6P5IRU8
LinkDB
Position
Unknown
AA seq 1140 aa
MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGK
IAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGI
IGIIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELQVIDVKFLYGCQAPTICF
VYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYH
NGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDL
RVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIV
DMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDSSRE
TDDTLVLSFVGQTRVLMLNGEEVEETELTGFVDDQQTFFCGNVAHQQLIQITSASVRLVS
QEPKALVSEWKEPQGRNISVASCNSSQVVVAVGRALYYLQIHPQELRQISHTEMEHEVAC
LDITPLGDSSGMSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSH
YLLCALGDGALFYFGLSIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIY
SSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYES
PRKICYQEVSQCFGVLSSRIEVQDASGGTTALRPSASTQALSSSVSSSKLFSSSTAPHET
SFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEE
AEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTAEKELR
TECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEIL
DDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGET
STPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTER
KTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEELTRIH
NT seq 3423 nt   +upstreamnt  +downstreamnt
atgtcgtacaactacgtggtgacggcgcagaagcccacggccgtcaacggctgcgtgacg
ggtcacttcacttctgccgaagacttgaatctgctgattgccaaaaacacccggctggag
atctatgtggtcaccgcagaggggctgcggcccgttaaggaggtgggcatgtatggcaaa
attgctgttatggagctcttccggcccaagggggagagcaaggaccttctcttcatcctg
acagccaaatacaacgcctgcatcctggagtataagcagagtggggagagcattgacatc
atcacccgagctcatggcaacgtccaggatcgcatcggtcgtccctctgagactgggatt
atcggcatcattgaccccgagtgccggatgatcggcttgcgcctctatgatggcctcttt
aaagttatccctctggaccgcgacaataaagaattgaaggccttcaacattcgtctggag
gagctgcaagtcattgatgtcaagttcctgtacggttgccaggcccctaccatctgcttt
gtttatcaggacccccagggacggcatgtcaagacctatgaagtatctcttcgagagaag
gagttcaataaaggcccttggaagcaggaaaatgtggaggcggaggcttcaatggtgatt
gcagtgcccgagccttttggaggtgcaatcattattggccaagaatccatcacgtatcac
aatggcgataagtacctggccattgcccctcccatcatcaagcaaagcacgattgtgtgc
cacaatcgagtcgatccaaatggttcccgatacctgctgggagacatggaaggccgtctc
ttcatgctgcttctagagaaggaggagcagatggacggcacagtgaccctgaaggacctt
cgggtggagcttcttggagagacctccatcgctgaatgcctgacatacctggacaatggg
gtggtgtttgttggctcccgccttggcgattctcagcttgtaaagctcaacgtagacagc
aacgagcaaggctcctacgttgtggccatggagacctttaccaacctaggtcccattgtg
gacatgtgtgttgtggacctggaaaggcagggccagggccagctggtcacgtgttctggg
gcttttaaggaaggctccttgcggatcattcggaatgggatcgggatccatgaacatgcc
agcattgacctgccaggcatcaaaggcttatggcctctcaggtctgactctagccgagaa
actgatgacaccttggtgctgtcctttgtgggccagacgagagttctgatgttgaatggt
gaggaggtggaggaaacggagctgactggctttgtggatgatcagcagactttcttctgc
ggaaacgtggctcatcagcagctgatccagatcacctctgcctctgtgcggctcgttagc
caggagcccaaagccctagtgagtgaatggaaggagcctcagggcaggaacatcagcgtg
gcctcctgtaacagcagccaggtggtggtggccgtgggcagggccctctactacctgcag
attcatcctcaggaactcaggcagataagccatacggagatggagcatgaggtggcgtgc
ttggacatcacccctctgggggacagcagtgggatgtctcccctctgtgccattggcctc
tggaccgacatctctgcccgtatcttgaagcttccctcttttgagctgttgcacaaggag
atgcttgggggagagatcattcctcggtccatcctgatgaccacctttgagagtagccac
tacctcctctgcgccttgggtgatggcgccctcttctactttggactcagcattgagaca
ggcctgttgagtgaccggaagaaggtgaccctcgggacgcagcccacggtgctgagaacg
tttcgctccctctccaccaccaacgtctttgcttgttctgaccgtcccaccgtcatctac
agcagcaatcacaagttagtcttctccaacgtcaacctcaaggaggtcaactacatgtgt
cccctcaactctgacggctaccctgacagcctggccttggccaacaacagcaccctcacc
atcggcaccattgacgaaatccagaagctgcacatccgcaccgtgcctctctatgagtct
cccagaaagatttgctaccaggaagtgtcgcagtgctttggggtcctctcgagtcgaatt
gaggtgcaggatgccagcggagggacgacggccctgcggcccagcgcgagcacccaggcc
ttgtccagcagcgtcagctccagcaagctgttctccagcagcacagcccctcatgagacg
tcctttggagaagaggttgaggtgcacaaccttctcatcattgaccagcacacctttgaa
gtgctccatgcccaccagttcctacagaacgagtatgctctcagcctggtctcctgcaag
cttggcaaagaccccaacacgtacttcatcgtgggcactgccatggtgtatccggaagag
gctgagcccaagcagggtcgaattgtcgttttccagtactcagatggcaaactacagact
gtagctgagaaggaagtaaaaggtgccgtgtactccatggtggaattcaatgggaagctc
ttggccagcatcaacagtacggtgcggctctatgagtggacagccgagaaggagctcagg
acagagtgcaatcactacaacaacatcatggccctgtacctgaagaccaagggggatttc
attctggttggcgacttgatgcgctcggtgctgcttctggcctacaagcccatggagggc
aacttcgaagagatcgcccgggactttaaccccaattggatgagcgccgtagagatctta
gatgatgacaacttcctgggcgctgagaatgcttttaacttgtttgtgtgtcagaaggac
agtgctgccaccactgacgaggaacggcaacatctgcaggaggtggggctcttccacctg
ggggagtttgtcaacgtcttctgccatggctctctggtgatgcagaacctgggtgagacc
tccacccccacgcaaggctccgtgctctttggaacagtcaatggcatgatcgggctggtg
acctcactgtcagaaagctggtacaatctcctcttggacatgcagaaccgactcaataaa
gtcatcaaaagtgttggcaagatcgagcactccttctggagatcgtttcatactgaacgc
aagacggagccagctacaggtttcattgatggagatctgattgaaagtttcctggatatc
agccgacccaagatgcaggaagttgtggctaacttacagtatgatgacggcagcggtatg
aagcgagaagccaccgcagatgacctgatcaaggtcgtggaggagctgacccggatccat
tag

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