Phascolarctos cinereus (koala): 110196306
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Entry
110196306 CDS
T05867
Symbol
USP39
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2 isoform X1
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
pcw
Phascolarctos cinereus (koala)
Pathway
pcw03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110196306 (USP39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcw03041
]
110196306 (USP39)
Spliceosome [BR:
pcw03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
110196306 (USP39)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
110196306
NCBI-ProteinID:
XP_020825132
UniProt:
A0A6P5ISS4
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All DBs
Position
Unknown
AA seq
572 aa
AA seq
DB search
MSSRSKRETRSSARGKRDGESRSSSSRSKRERDSDGTGSRGSPVRVKRERNSEPVAARDY
AGGSVPALVPAPSLPGTRVKREREADEDSEPEREVRVRYGRLDAEDRRSRHCPYLDTINR
SVLDFDFEKLCSISLSHINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFY
CLPDNYEIIDSSLEDITYVLKPTFTKQQISNLDKQAKLSRAYDGTTYLPGIVGLNNIKAN
DYANAVLQALSNVPPLRNYFLEEENYKDIKHPPGDIMFLLVQRFGELMRKLWNPRNFKAH
VSPHEMLQAVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVTDVFQGSM
RIFTKKLPHPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQV
PLFNILAKFNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNF
PITNVDLREYLSEEVQAVHKNTTYDLIANIVHDGKPTEGSYRIHVLHHGTGKWYELQDLQ
VTDILPQMITLSEAYIQIWKRRDSDETNQQGA
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgtctagccgttcgaaaagggagacgcggagctccgcccggggcaagcgggatggggag
tcacggagcagctcgagtcggtcgaagcgggagcgggattcggacggcacggggtctcgg
gggagcccggtgcgcgtgaaacgggaacggaactcggagccggtggcggcgcgagactat
gcgggcggaagcgtgcccgcgctcgtccccgcgccgtcgctaccggggacgcgcgtgaag
cgggagcgtgaggccgacgaggactcggagccggagcgggaggtgcgagtgcgatatgga
cgcttagacgctgaggatcgaaggagccgccattgcccctacctggacaccattaacagg
agcgtcctggactttgactttgaaaaactgtgctccatttcgctttcacacatcaatgcg
tatgcctgcctggtgtgtggcaaatactttcagggacgagggttgaaatcacatgcctac
attcacagtgtccagttcagccaccatgttttccttaatctgcacaccctcaagttttac
tgccttccagacaactacgaaatcattgactcctcactggaggacatcacctacgtcttg
aagcccacattcaccaagcaacagatttcaaacttggacaagcaggccaagctatctcgg
gcttatgatggtaccacatacctgcctggtatcgtagggctgaataatatcaaggcgaat
gactatgccaatgccgtgcttcaggcgctgtccaatgtccccccgctccggaactacttc
cttgaagaagagaactacaaggatatcaagcatcctcccggggacatcatgttcttactg
gtgcagcggtttggagagctgatgagaaaactgtggaatcctcggaatttcaaggcgcac
gtctctccccatgagatgctccaggccgtcgtcctgtgcagcaagaaaacttttcagatc
actaagcaaggtgatggggtagactttctttcctggttcctgaatgccttgcactcagct
ctcggggggacaaagaagaagaagaagactattgtgacggatgttttccaggggtccatg
agaatcttcactaagaaactgccacacccagacttgccagcagaagagaaagaacagtta
ctccataatgatgagtaccaggagactatggttgagtcgacctttatgtatctgaccttg
gaccttcccactgccccactttacaaggatgagaaggagcagctcatcatcccccaggtg
ccgctcttcaacatcttggccaagttcaacggcatcactgaaaaggaatacaagacgtac
aaggagaactttctgaagcgcttccagctcaccaaattgcccccgtatcttatcttttgt
attaaaaggttcaccaagaataacttctttgtggagaagaacccaaccatcgtcaacttc
cccatcacaaatgtggacctgagggaatatctctccgaggaagttcaggctgtgcacaag
aacaccacctatgacctcatcgccaacatcgtgcatgatgggaagcccaccgagggctct
tatcggattcatgtgcttcaccacgggacaggcaagtggtatgaactccaggacctgcaa
gtcactgacatcctcccccagatgatcacactttcagaggcctacatccagatatggaag
agacgggacagtgacgagaccaaccagcagggggcttga
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