Phascolarctos cinereus (koala): 110196764
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Entry
110196764 CDS
T05867
Symbol
PCDH17
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin-17
KO
K16499
protocadherin delta 2
Organism
pcw
Phascolarctos cinereus (koala)
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pcw04515
]
110196764 (PCDH17)
Cell adhesion molecules [BR:
pcw04515
]
Cadherins
Protocadherins
110196764 (PCDH17)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
110196764
NCBI-ProteinID:
XP_020825768
UniProt:
A0A6P5IXJ4
LinkDB
All DBs
Position
Unknown
AA seq
1167 aa
AA seq
DB search
MYLSICCCFLLWAPALTLKNLNYSVPEEQGAGTVIGNIGKDARLPQQGLLPPERGGGGGV
SIGAGRGKSGSYRVLENSAPHLLDVDADSGLLYTKQRIDRESLCRHNAKCQLSLEVFAND
KEICMIKVEIQDINDNSPSFPSDQIEMEISENAAPGTRFPLTSAHDPDAGDNGLRTYLLT
RDDHGLFAVDVKSRGDGTKFPELVIQKPLDREQQNHHTLVLTALDGGEPPRSATMQINVK
VIDSNDNSPVFEAPSYLVEVPENSPLGTVVIDLNATDADEGQNGEVLYSFSSYVPDRVRE
LFSIDPKTGLIRVKGNLDYEENSLVEIDVQARDLGPNPIPAHCKVTVKLVDRNDNAPSIG
FVSVRQGALSEAAPPGTVIALVRVTDRDSGKNGQLQCRVLGGGGAGGGLVGSGVGGPVPF
KLEENYDNFYTVVTDRPLDRETQDEYNVTIVARDGGSPPLNSTKSFYVKILDENDNPPRF
TKGLYLLQVHENNIPGEYLGSVLAHDPDXGQNGTVSYSIVPSHIGDVSIYTYVSVNPTNG
AIYALRSFNYEQTKAFEFKVLAKDSGAPAHLESNATVRVTVMDVNDNAPVIVLPTLQNDT
AELQVPRNAGLGYLVSTVRALDNDFGESGRLTYEIVDGNEDNLFEIDPSSGEIRTLHPFW
EDVTPVVELVVKVTDHGKPTLSAVARLIIRSVSGSLPEGVPRVNGEQRRWDMSLPLIVTL
STISIILLAAMITVAIKCKRENKEIRTYNCRIAEYSHPQLGGGKGKKKKINKNDIMLVQS
EVEERNAMNVMNVVSSPSLATSPMYFDYQTRLPLSSPRSEVMYLKPASNNLTVPQGHGGC
HTSFTGQGTNATETPSTRMSIIQTDNFPAEPNYMGSRQQFVQSSSTFKDPERASLRDSGH
GDSDQADSDQDTNKGSCCDMSVREALKMKSTSTKSQPLEQEQEECVNCTDECRVLGHSDR
CWMPQFPTTNQAENADYRTNLFVPTVETNVETETYETVNPTGKKTFCTFGKDKREHTILI
ANVKPYLKAKRALSPLLQEVPSASSSPTKTCIEPCTSTKGPIDGCDAKPGTLAEASNQYL
SADSQYLSPSKQSRDTAFMASDQMARVFADVHSRVSRDSNEMDSVLEQLDHSNRDLGRES
VDAEEVVREIDKLLQDCRGSDPVAVRK
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgtacctttccatctgttgctgcttcttgctctgggctcccgccctcacgctcaagaac
ctcaactactccgtgcccgaggagcaaggggccggcaccgtgatcggcaacatcgggaaa
gatgcgaggctgccgcagcaggggcttctgccccctgagcgaggcggcggcggcggtgtc
agcatcggagccgggcgcggcaaatcgggcagctaccgtgtcctggagaactcggcgccg
cacttactggacgtggacgctgacagcgggctcctctataccaagcagcgcattgaccgc
gagtccctgtgccgccacaacgccaagtgccagctctccctagaggtcttcgccaacgac
aaagagatctgcatgatcaaggtggaaatccaagatatcaatgacaattcaccctccttc
ccctccgaccagatagaaatggaaatctcagagaacgccgctccagggactcgctttcca
ctcaccagcgcccacgaccccgacgccggtgacaacgggctccgcacttacctgctcacc
cgcgacgaccacggcctcttcgccgtggacgtcaagtcccgcggagatggcaccaagttc
ccggagctggtgattcagaagccactggaccgagagcagcagaatcaccacaccctagtg
ctgaccgccctggacggcggagaaccgccccgttccgctaccatgcagattaacgtgaag
gtgatcgactccaacgacaacagtccggtcttcgaggccccctcttaccttgtggaggtg
cccgagaattccccactgggcaccgtggttattgacctcaacgctacagacgcagatgag
ggccagaatggagaggtgctgtactccttcagcagctacgtgccagaccgggtgcgcgag
ctcttttccattgaccccaaaacgggactgatccgcgtcaagggtaacctcgactatgaa
gagaacagcttggtggagattgacgtacaggcccgggacttggggcccaaccccattccg
gcccattgcaaggtcacggtcaagctggtagaccgcaacgacaatgcgccctccataggc
ttcgtgtcggtgcgccagggggcgctgagcgaggccgccccgccgggcactgtcatcgcc
ctggtgcgggtcactgacagggactcaggcaagaacggccagctgcagtgtcgcgtcctg
ggcggaggaggggcgggaggaggacttgtagggagcggggtcggaggcccagtgcccttc
aaactggaagagaactatgacaacttctacactgtggtgactgaccggccactggacagg
gagacccaggatgagtacaatgttaccatcgtggcccgagacggaggatctccccctctc
aattccacgaagtcattctatgtgaaaatcctagacgagaatgacaacccgccccgcttc
accaaggggctttacctactgcaggtacatgaaaataacatccccggtgagtacctgggt
tctgtgctggcacacgatcccgacntgggccaaaacggcaccgtttcctactccattgta
ccctcgcatatcggggatgtgtccatctatacctacgtgtctgtgaaccccacgaacggg
gccatctatgctttgcgctccttcaactatgagcagaccaaagcctttgagttcaaagtg
ctagctaaggactcaggcgccccggctcacttagagagcaatgccacggtgcgagtgact
gtcatggacgtgaacgataacgcacctgtcattgtgctgcccaccctgcaaaacgacaca
gccgagctgcaggtcccccggaatgccgggttgggctatctagtgagcactgtgcgagcc
ctggacaacgacttcggggagagcgggaggctcacctatgagattgtggacggcaatgag
gacaacctgttcgagatagacccgtccagcggcgagatccgcaccctgcaccccttctgg
gaagacgtgaccccagtagtggagctagtggtgaaggtgacggatcacgggaagcccacc
ctctcagccgtggctaggctcatcatccgctcggtgagcggctctcttccagagggtgta
ccccgggtgaacggcgagcagcgccgctgggacatgtccctgccactgatagtcacccta
agcactatctccattatcctcctagcggccatgatcaccgtcgcgatcaagtgcaagcgg
gagaacaaggagatccggacttacaactgccgcatcgcagaatacagccacccgcagcta
ggtgggggcaagggcaaaaagaagaagatcaacaagaacgatatcatgttagtgcagagt
gaagtggaggagagaaatgccatgaatgtcatgaatgtggtgagcagcccctccctggcc
acctcccccatgtactttgactatcagactcgcctgcccctcagctcgcccaggtctgag
gtgatgtacctgaaacctgcctccaacaacctgactgttcctcaggggcatgggggctgc
cacaccagcttcactggacaagggactaatgcaaccgagaccccctccactcggatgtcc
ataattcagacagacaattttcccgcagagcccaattacatgggcagcaggcagcagttt
gttcaaagtagctccacgttcaaggacccagaaagagccagcctgagagacagtgggcat
ggggacagtgatcaggctgacagtgaccaagacactaacaaaggctcctgctgtgacatg
tctgttagggaggcactcaagatgaaatctacttcaactaaaagccaaccacttgaacaa
gaacaagaagagtgtgttaattgcacagatgaatgccgagtgcttggtcattctgacaga
tgttggatgccacagttccctacaaccaatcaggctgaaaatgcagattaccgcacaaat
ctctttgtacccacagtggaaactaatgttgagactgagacttatgaaactgtgaatccc
accgggaaaaagactttttgtacatttggaaaagacaagagagagcacactattctcatt
gccaatgttaaaccttatttaaaagccaaacgtgccctgagccctcttctccaagaggtc
ccctcagcatcaagcagcccaaccaagacatgcattgagccttgcacctcaactaaagga
ccgatagatggttgtgacgccaaaccaggaactctggcagaagcaagcaaccagtacctg
tccgctgacagtcagtatctgtctcctagtaaacagtcaagagacactgcgttcatggct
tctgatcagatggctagggtctttgcggatgtgcattcccgagtgagtcgagactccaat
gagatggactctgttcttgagcagttagaccattcgaaccgggatctaggcagagagtca
gtggatgcagaggaagttgtgagagaaattgataagcttttacaagattgccggggaagt
gaccctgtggctgtgagaaagtga
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