Phascolarctos cinereus (koala): 110196797
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Entry
110196797 CDS
T05867
Symbol
ATXN2
Name
(RefSeq) ataxin-2 isoform X1
KO
K23625
ataxin 2/2L
Organism
pcw
Phascolarctos cinereus (koala)
Pathway
pcw05014
Amyotrophic lateral sclerosis
pcw05017
Spinocerebellar ataxia
pcw05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
110196797 (ATXN2)
05017 Spinocerebellar ataxia
110196797 (ATXN2)
05022 Pathways of neurodegeneration - multiple diseases
110196797 (ATXN2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcw03019
]
110196797 (ATXN2)
Messenger RNA biogenesis [BR:
pcw03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
110196797 (ATXN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SM-ATX
LsmAD
PAM2
LSM
Motif
Other DBs
NCBI-GeneID:
110196797
NCBI-ProteinID:
XP_020825836
UniProt:
A0A6P5J3S2
LinkDB
All DBs
Position
Unknown
AA seq
1052 aa
AA seq
DB search
MRMVHILTSVVGSKCEVQVKNGGVYEGVFKTYSPKCDLVLDAAHKKTTDSSPGPKREDIV
ERILFKCSDFVVVQFKDMDSNYARRVPSETDAFTDSAISAKVNGEHKEKDLEPWDGGETA
TTEEFEALETDVSNGWDPNDMFRYNEENYGVVSTYDSSLSSYTVPLERDNSEEFLKREAR
ANQLAEEIESSAQYKARVALENDERSEEEKYTAVQRNASDREGHSVNMRESKYIPPGQRT
RDVMSWGSGRQNSPRMGQPASGPTPSRSGSHSSEFSLNSAADQRVVNGGVPWPSPCPSPS
SRPPSRYQSGPNSLPPRAATPTRPPSRPPSRPSRPPSHPSAHGSPAPVSTMPKRMSSEGP
PRMSPKAQRHPRGHRVSTGRGSISSGLEFVSHNAPGEVPTPPVARSSPSGGTWSSVVSGV
PRLSPKTHRPRSPRQSIGSTPPGPVLSSPQAGTVPTESAAVPLPAPSPTSANPASSRAVT
PSSDAKDSRLQDQRQNSPAGNKENIKPSETSPSFMKAENKGISPIVSEHRKQIDDLKKFK
NDFRLQPSSTPDNVDHLLNKNREGEKSRDMIKDQPESSPKDVLLENIGASCTSGSSKPGS
PCISPSASGNSDQKRGPEVTSQGVQTASPGSKHEKDDQEDKKDAAEQVRKSTLNPNAKEF
NPRSFAQPKPSTTPTSPRPPAQPSPSMVGHQQPTPVYTQPVCFAPNMMYPVPVSPGVQPL
YPIPMTPMPVNQAKTYRAVPNMPQQRQDQHPQNTLMHPASAAGPPIVATPPAYSAQYVAY
SPQQFPNQPLVQHVPHYQSQHPHVYSPVIQGNTRMMAPPAHAQPGLVSSSATQYGAHEQT
HAMYACPKLPYNKETGPSFYFAISTGSLAQQYAHPNATLHPHTPHPQPSATPTGQQQNQH
SGSHTAPSPVQHHQHQAAQALHLANPQQQPAIYHAGLAPTPPSMTPGSNTQSPQNSFPAA
QQTVFTIHPSHVQPAYTNPPHLAHVPQAHVQSGMVPSHPTAHAPMMLMTTQPPGGPQAAV
AHSALQPIPVSTAAHFPYMTHPSVQAHHQQQL
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atgagaatggttcatatacttacatcggttgttggatccaaatgtgaagtacaagtgaaa
aatggaggtgtatacgaaggagtttttaaaacatatagtcctaagtgtgatttagtgctt
gatgctgctcataagaaaaccacagactccagccctgggccaaagcgtgaagatatcgtg
gagaggattttgttcaagtgttcagactttgttgtggtacagttcaaagacatggattcc
aattatgccagaagagttccttcagaaacagatgcttttactgattcagctatcagtgct
aaagtaaatggtgaacacaaagagaaggaccttgaaccatgggatggaggtgaaactgcc
accactgaagagtttgaggctttagagactgatgtttctaatggatgggatcccaatgat
atgtttcggtataatgaagaaaattacggtgtagtttccacctatgatagcagtttatca
tcatatacggtaccattagaaagagataattcagaagagttcttaaaacgggaagctcga
gcaaaccaattagccgaagaaattgaatcaagtgctcaatacaaagctcgggtggcgctt
gaaaatgatgagagaagtgaagaagaaaaatatactgcggttcagagaaatgccagtgat
cgtgaggggcacagcgtcaacatgagggaaagcaagtacattccacctgggcaaagaacc
cgagatgtcatgtcgtggggaagtggtagacaaaattcaccaaggatgggccagcctgca
tccggccccaccccttcaagatctggatctcattcttcagaatttagcctgaattctgca
gcagaccaaagagtcgttaatggaggtgttccctggccatcgccttgcccatctccttcc
tctcgcccaccttctcgctaccagtcaggtcccaactctcttccacctcgggcagccacc
cctacaaggccgccctccaggcccccctcgaggccatccagacccccgtctcacccctct
gctcatggttctccagctcctgtctctactatgcctaaacgcatgtcttcagaaggacca
ccaaggatgtcaccaaaggcccaacgacaccctcgtggtcatcgagtttctactgggcgg
ggttcaatctccagtggtttagaatttgtttcccacaatgcaccaggcgaagtacctact
cctcctgtggcacggagtagcccctcaggaggaacgtggtcatcagtggtcagtggggtt
ccaagattgtctccaaaaacacacagaccgaggtctccaagacaaagcattggaagtact
cctcctggtccagttctctcttctccccaagctgggactgtgcccacagaatctgctgct
gtgcctctgccagctccatctcctacgtctgccaatcctgcgtccagccgagcagtgacc
ccatctagtgacgctaaagattctaggcttcaggatcagaggcaaaattctccagctgga
aacaaagaaaatattaagccgagtgagacatccccaagctttatgaaagcagaaaataaa
ggtatatcacccattgtttcagaacatagaaaacaaattgacgatttaaagaaatttaag
aatgattttaggttacaaccgagttccacccctgataatgtggatcacctgctcaacaaa
aacagagaaggagaaaagtcaagagatatgatcaaagaccaacctgaatcgagccctaag
gatgttctcctggagaacatcggtgccagctgcacgagtggcagcagcaagccaggcagt
ccttgcatttctccatcagccagtgggaactcagaccagaagagaggcccggaggtcact
tcccaaggtgtgcagacagccagcccaggaagtaaacatgagaaggacgatcaagaagac
aaaaaagatgcagctgagcaagttaggaaatccaccttgaatcccaatgcaaaggagttc
aatcctcgttcttttgctcagccaaagccttcaaccactcccacttcacctcgtcctcca
gcccagccaagcccttccatggtgggtcatcaacagccaactccggtatacactcagcca
gtttgttttgcaccaaacatgatgtacccggtcccagtgagcccgggcgtgcagcctcta
tatcctatacctatgacgcccatgccagtgaaccaagccaagacatatagagcagtacca
aatatgccacagcagcggcaagatcagcaccctcagaacaccttgatgcatcctgcctca
gctgcaggccctcccatcgtggccacgccgccagcctactcagcacaatatgtggcctat
agccctcagcagtttcctaatcagcctcttgttcagcacgtcccgcattaccagtctcag
catcctcatgtctatagccctgtaatacagggtaataccagaatgatggcaccaccagcc
catgcccagcctggtttagtatcctcatcagcaactcagtatggtgctcatgagcagaca
catgcgatgtatgcatgtcccaaattaccatacaacaaggagacaggcccttctttctac
tttgccatttctactggttcccttgctcagcagtatgcccatcctaatgctaccctgcac
ccacatactccacatcctcagccttctgccacccccactggacaacaacagaatcagcat
tcgggaagccacactgctcccagccctgtgcagcaccatcagcaccaagccgcacaggcc
cttcatctggcaaacccccagcagcagccggccatttaccatgctggtctggcgccaacc
ccgccttcaatgacaccgggctcaaatacgcagtctccacaaaacagtttcccagcagca
caacaaacagtctttacgattcacccctctcatgttcagcctgcatataccaacccaccc
cacttggcccacgtacctcaggctcatgtgcagtcaggaatggttccttctcatccaact
gcccatgctccaatgatgctaatgacgacacagccacctggcggtccccaggccgccgtc
gctcacagtgcactacaacccattccagtctcgacagcagcgcatttcccttatatgacg
cacccttcagtacaagcccaccaccaacagcagttgtaa
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