Phascolarctos cinereus (koala): 110197035
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Entry
110197035 CDS
T05867
Symbol
SCN11A
Name
(RefSeq) sodium channel protein type 11 subunit alpha isoform X1
KO
K04843
voltage-gated sodium channel type XI alpha
Organism
pcw
Phascolarctos cinereus (koala)
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pcw04040
]
110197035 (SCN11A)
Ion channels [BR:
pcw04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
110197035 (SCN11A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
Motif
Other DBs
NCBI-GeneID:
110197035
NCBI-ProteinID:
XP_020826256
UniProt:
A0A6P5J4Y4
LinkDB
All DBs
Position
Unknown
AA seq
1695 aa
AA seq
DB search
MFIICTVIVNCVFMAAVKDGTVNKYAEHVFTAIYIFEALIKILARGLFLDEFTYLRDPWN
WLDFIVIMLAFLSYGISTLDSVSALRTFRVLRALKAISVISGLKVIVGALLRSVKKLVDV
MILTIFCLSIFALVGQQFFMGSLRYRCISRSCLSIVNEPFEAENCTFLKDDADFLENCTE
NKNEGSTEKRLCGTWMGNRSCCPEFICCKTKISPDFNFTNFDHFGWAFLSMFRVMTQDSW
ERLYQQTLRAVGPFAVVFFVVVIFLGSFYLINLTLAVVTMSYEEQNKNVAAETEAKEKMF
REALQLLKQEQETLVAMGIDRSSLNSLETSSISCQKRSLFSNKRRSFLVGNSEQEQAALS
DPDDGVQTKQLLNQTKRLSQNLSVDYWDDRGNTFQRQRALSAVSIVTITMQEYEKSQQKC
LPCQKNFVSKYCIWECCPLWLHIKRTVELIIMDPFADLAITICIIVNTVFMAMEHCGKGK
DFEKMLNIGNYVFTGIFVAEMFFKIIALDPYYYFLRPWNIFDGIIVVLSLVEIIISSSIT
SNLSILRSLRLLRVFKLAKSWPTLNTLIKIIGHSVGALGNLTLVLAIIVFIFSVVGMQLF
GTTFNDTVSRSNSTGLQRRRWHMGDFFHSFLVVFRILCGEWIDNMWECMRESPHMLCILV
FLLILVIGNLVVLNLFIALLLNSFSREERGGNGAGEVRKTKLQLAFDRFHRAFHFVKRAI
WQFCSSSFKKQRFRKPKDVSKKQKAQNKDIIPLESGINREQANHEKFCPQDETSPPGFTG
LGCIQENLNARHPSLVKAPLAEGEEDEDSESLDEDEPQDFMETEFCKQEEKECMSPGAVS
GEVDVFSEDGTEWTAQKLKEKFDTISYLSNCSTIDLKDLNLLIPEMIPEKGPERCLPKVC
NKCFPCFALNVRKSPGILWLKLRITCYRIVKHNWFESFIIFMILLSSGALIFEDCHLPSK
PTIKKLLEFTDRVFTYIFILEMFLKWVAYGFRKYFTNAWCFLDFIIVNVSIISLIADNST
TPLSFNVKSLRTLRALRPLRALSQFEGMRVVVNALVGAIPAILNVLLVCLIFWLIFCMLG
VNLFAGKFGKCINQNKKETINYTIISNLSLCRIDIHPDVCWTNAKVNFDNVGIGYLALLQ
VATFKGWMDIMYAAVDSRGEKQQPNFEANKAAYLYFVVFIIFGSFFTLNLFIGVIIDNFN
QQQKKLGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNKCQAFVFDVVTSQAFDIFI
ITLICLNMITMMAETDSPEGPNIQKAHLLDTLNLVFVVIFTVECLLKIFALRQFYFANGW
NLFDCVVVVLSIVSLIVSVLESSKAIPFPPVLFRVIRLARIGRILRLVRAAKGIRTLLFA
LMMSLPSLFNIGLLLFLVMFIYAIIGMTNFSQVKYEAGIDDMFNFRTFGNSMLCLFQITT
SAGWDALLSPMLSSKYSCCNPENACNSETCNPESSCPKNDAKPDSDCVSSVMAITFFVSY
IIISFLIVVNMYIAVILENFNTATEESEDPLSEDDFDIFYETWEKFDPEATQFIKYSALS
DFADALPEPLRVAKPNRNQLLLMDLPMVSGNRLHCMDILFAFTTRVLGDSEGMDCLKSQM
EEKFMEANPNKKLYEPIVTTTKRMEEERCAAIIQKAYRLHLMKSNAKKTSSLTPQMVCNG
AIGNLEVPDGKIHFD
NT seq
5088 nt
NT seq
+upstream
nt +downstream
nt
atgttcatcatatgcactgttattgtcaactgtgtcttcatggctgctgtgaaagatggc
actgttaataaatatgctgagcatgtttttactgccatctatatttttgaagcattgatt
aaaatattagcaagaggactttttctggatgaattcacttaccttcgagatccatggaac
tggttggatttcattgtcatcatgctggcatttctatcgtatgggatttctacactagac
agtgtgtcagctctaagaacatttcgtgtcctcagagctttaaaagccatctcagtcatt
tcaggtttgaaggtcattgttggggccttgctgcgctcagtgaagaaactggtggatgtg
atgattctgaccatcttttgcttgagcatttttgccttggtggggcagcagttcttcatg
ggaagtctgaggtatagatgtatcagcaggtcctgtttgagtattgtgaatgagcctttt
gaagctgaaaactgtacatttctcaaggatgatgctgattttctagaaaactgcactgaa
aataaaaatgaaggctcaactgaaaaaagattatgtggcacctggatgggtaacagatca
tgttgccctgagtttatatgctgtaaaactaagatcagtccagattttaattttacaaac
tttgaccattttggttgggcctttctcagcatgttccgagtgatgactcaggattcctgg
gaacgtctttatcagcagacccttcgagccgtcgggccatttgctgtggtcttttttgtg
gtagtcatcttcctgggctctttttacctgattaacctgaccttggctgtcgtcaccatg
tcatacgaggagcagaataaaaatgtggcagctgagacagaagcaaaagagaaaatgttc
agagaagctctgcagctgctaaagcaggagcaggagactctggttgctatgggaatcgat
aggagctcacttaattcccttgaaacatcatccatttcttgtcaaaagagaagcctgttc
agcaacaagaggagatccttccttgtgggaaattctgagcaagagcaagccgcactctca
gatcctgatgacggtgtccaaacaaagcagttattgaaccaaaccaagcgtctgtcccag
aacttgtccgtggattactgggatgaccgcggcaacaccttccagaggcagcgagccctg
agtgcagtcagcatcgtcaccatcactatgcaggagtatgaaaagtcacagcagaaatgc
cttccttgtcagaaaaactttgtctccaaatactgcatttgggagtgttgtcccctgtgg
ctacacattaaaaggactgtggagctaattatcatggatccctttgctgacctggctatc
accatttgtatcatcgtcaacactgtattcatggcaatggagcactgtggaaaggggaaa
gacttcgagaaaatgctcaatataggaaattatgtttttactggaatttttgttgcagaa
atgttcttcaaaattattgccctggatccatactattattttctccgtccctggaacatt
tttgacggcatcattgttgttctgagtcttgtggaaataatcatttcaagttctattaca
tcaaatttgtcaatattacgttccttaagactgcttagagttttcaagttagccaaatcc
tggccaacattgaatactcttattaagattattggccactcagttggtgccctgggtaac
ctcactctggtcctggccatcattgtcttcatcttctcagtcgttggcatgcagcttttt
gggactacgttcaatgacactgtttcacgctctaactccacgggattgcaacgacggcgt
tggcatatgggagacttcttccactccttcctggtggttttccgcattctctgtggtgaa
tggattgacaacatgtgggagtgtatgcgtgagtcaccccatatgctgtgcattctggtt
ttcttgctgatcttggtgataggaaacttggtggtcctcaatcttttcatcgccctgctg
ctcaactccttcagcagagaggaaagaggagggaatggggcaggagaggtgaggaagacc
aagctgcagcttgcttttgataggttccaccgggcatttcattttgtgaaacgtgccatc
tggcagttttgtagcagttctttcaagaagcaaaggtttagaaagccaaaggacgtgtcc
aaaaagcaaaaggctcagaataaagacattattccactggagtcgggaataaaccgagag
caagcaaaccatgaaaaattttgccctcaggatgagaccagtccccctgggttcacaggc
ctgggctgtatacaggagaatttgaatgctaggcatccttcacttgttaaagccccactt
gctgaaggagaagaagatgaagatagtgaatctctagatgaagatgagccccaggatttc
atggaaacagagttttgtaaacaggaagaaaaggagtgtatgagcccgggagctgtgagt
ggagaggttgatgtattttctgaagatggcactgaatggacagcacaaaaattgaaagag
aagtttgacacgatcagctatctatctaactgcagcaccattgatctgaaggatctcaat
ttgttgattcctgaaatgattcctgaaaaggggcctgagagatgtttgcccaaagtctgc
aacaaatgcttcccctgctttgcactgaatgtaagaaagtctcctggaatcctttggctg
aaactgaggatcacctgctacagaatcgtcaagcataactggtttgagagtttcattatc
ttcatgattcttctgagcagtggagctctgatatttgaagattgtcacctcccgtcaaaa
cctaccattaagaaattgctggaatttactgatagggtttttacctacattttcatccta
gagatgtttttaaaatgggtggcatatggatttaggaagtattttacgaatgcatggtgc
tttctcgacttcatcattgtaaatgtctctatcataagcctcattgctgataattcaaca
acacccttgtcttttaatgttaaatcccttcggacactgagagccctgaggcccttgcga
gcactgtcccagtttgaaggaatgagggttgtggtcaatgcccttgttggggccatccct
gccatcttaaatgttctgcttgtctgcctcatcttctggctcatcttctgtatgctaggg
gtgaacctttttgctgggaaatttggaaagtgcatcaaccaaaacaaaaaagaaactata
aactacaccatcattagcaacctctccttgtgcagaattgatatccaccctgacgtgtgt
tggactaacgctaaagtcaactttgataacgttgggattggttacttggctcttctacag
gtggcaacatttaaaggttggatggacattatgtatgcagctgtagattcaagaggggaa
aagcagcagcccaacttcgaggcaaataaagctgcatatctctacttcgttgtttttatc
atttttggctccttcttcacattgaatcttttcattggtgttatcattgataactttaac
caacagcaaaaaaagttaggtggccaagatatcttcatgacagaggagcagaaaaaatat
tacaatgcaatgaaaaagctgggatcaaagaagccccaaaaacctattccaaggcctttg
aacaaatgccaagcttttgtgtttgatgtagtcacaagccaggcctttgacattttcatc
ataactctcatttgccttaatatgatcaccatgatggcagaaacagactctcctgaagga
cccaacatacagaaggcacaccttctggacaccctcaacttggtctttgttgtcatcttc
acagttgaatgtctcttgaaaatctttgctctgaggcaattctactttgctaatggttgg
aacttatttgactgtgtggtcgtggtgctgtccattgttagccttattgtttctgttctg
gaatcgagtaaggcaattccattccctcctgtgctcttcagagtcattcgcttggctcgg
attggccgaatactcagacttgttcgagcagctaaaggaatacggactcttctttttgca
ttgatgatgtcacttccttccctattcaacattggacttttgctctttctggtcatgttt
atctatgccattattggtatgactaatttttcccaggtgaaatatgaggcagggattgat
gacatgttcaactttcgaacctttggcaatagcatgctctgtcttttccaaatcactaca
tcagcaggttgggatgccctcttaagtcctatgttgagttcaaaatattcatgttgtaac
ccagagaatgcttgtaattctgaaacttgtaacccagaaagttcttgtcctaaaaatgac
gctaaaccagatagtgactgtgtgagctccgtcatggcaattacattctttgtcagttac
atcattatctccttcctaattgttgtcaacatgtacattgctgtgattttagaaaacttc
aacactgccactgaagagagtgaggatcccttaagtgaggatgactttgacatattctat
gaaacttgggaaaaatttgatcctgaagcaacacaattcatcaaatactcagctctctca
gactttgctgatgccttgccagaacccttacgtgtggccaagccaaacagaaatcagctc
ctactgatggatctgcccatggtcagtggcaatcgacttcactgcatggatatactgttt
gcttttaccacaagagtgctgggggactcagaaggtatggattgccttaaaagtcagatg
gaagagaaattcatggaggccaatcctaacaagaagttatatgaaccaattgtgaccacc
acaaagcgcatggaggaagagcgatgtgctgctatcatccagaaggcctatcgacttcac
ttgatgaagagtaatgccaagaaaacatcttccttaacccctcagatggtttgcaatgga
gccattggtaacttagaagtacctgatggcaaaatacactttgactga
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integrated database retrieval system
