Phascolarctos cinereus (koala): 110197342
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Entry
110197342 CDS
T05867
Symbol
TDRD9
Name
(RefSeq) LOW QUALITY PROTEIN: putative ATP-dependent RNA helicase TDRD9
KO
K18408
ATP-dependent RNA helicase TDRD9 [EC:
5.6.2.5
]
Organism
pcw
Phascolarctos cinereus (koala)
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcw03036
]
110197342 (TDRD9)
Enzymes [BR:
pcw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
110197342 (TDRD9)
Chromosome and associated proteins [BR:
pcw03036
]
Eukaryotic type
Gene silencing
piRNA pathway
110197342 (TDRD9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TUDOR
Helicase_C
DEAD
HA2_C
nSTAND3
HA2_N
AAA_14
AAA_22
FtsK_SpoIIIE
T2SSE
Mycovirus_RNAse
AAA_23
Motif
Other DBs
NCBI-GeneID:
110197342
NCBI-ProteinID:
XP_020826830
UniProt:
A0A6P5IXJ8
LinkDB
All DBs
Position
Unknown
AA seq
1422 aa
AA seq
DB search
MLRKLTLDQINDWFTIGKTVANVELLGSPPTFPAGPPGLGPQAHRAQPQAYAQAQAEMEA
EAEALTQAEARSREEARRPPPSDQAASAAGGSVGSRQAHARAVTSPVVGGLHEKKSPEME
YINKYRQLEAQEFDVCNSDHSSSGPGPKQPLYKSSSVPSIPETNYKYPDLPIIRCKEEVI
SLIESNSVVIIHGATGSGKSTQLPQYILDYYIHRSTYCNIVVTQPRKIGASSIARWISKE
RSWTLGGLVGYQVGLEKIATKDTKLIYMTTGVLLQKIVGAKSLAEFTHVFIDEVHERTEE
MDFLLLVVRKLLRTNSRFVKVILMSATISCREFADYFAVPVQNKMNPAYVFEVEGKPHTI
EEYYLNDFVHVNLMKLPQQLIDEPMITKEMYEIAVSLIQLFDELDMKENGDKTLSSTSFV
SERSSVLVFLPGLGEINYMHELLTNMVHKRLQVYPLHSSVTLEEQNNVFLTPVPGYRKSI
LSTNIAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLTWASKTSCNQRKGRAGRVSK
GYCYRLICKDFWINCIPDHVVPEMLRCPLGSTILKVKLLDMGEPRALLATALSPPSLGDI
ERTILLLKEIGALAVSGQREEENPHDGELTFLGRVLAQLPVDQQLGKLIVLGHVFGCLEE
CLIIAASLSLKNFFAMPSRQHLDGYRNKMKFSGNSKSDCIALVEAFKTWQACRQRGEFRH
PKDELDWGRLNYIQIKRIREVAELYEELKNRITQFNMCVDTQRPVMDREYIYKQRFILQV
VLAGAFYPNYFTFGQPDEEMAIRELAGKDPKTTVVLKHIPPYGFIYYKQLQSLFRQCGQV
KSIVFDGTKAFVEFSRNPTERFKTLPAVYMAIKMSQLKVPLELSVHTGEEIEGKVQGGSV
TKLRNTRVNVDFQKQTIDTMQISLDALEQSRAITSLLLTIEVTEVVEVGHFWGYRIDEKN
TNILKKLTVEINQLKLVPLLVRPYPDLVCLAPFANLNKETYFRAQILYVSGNSVEVFFVD
YGNRSHVSLDLLMEIPCHLLELPFQALEFKICKMRPSAKSLVCGEHWSYGASQRFAALVN
GSALIVKVYSVVHSVLHVDVYRYSGIKEVVNVRDMLVKECYAELAEESYESKQSNEMLKE
FFSKSVENAASATIPPSIHSKEDEKFLIRILLDSFSANKLGAPNCKVLLHGPFNPYELKC
HSMTRISKFRCVWIEKESINSVIISDAPEDLHQRMLVAASLSVNATGSTMLLRETSLMPH
IPGLPALLSMLFAPVMELRVDQSGKCYTGALCGLGWNPTTGTPVLPEHDIELAFDVQLNV
EDIVEINILRVAINKIVCDGPNGCMYLGPERIAQLQDNARQKLLGLFCKLKPREIIVPTW
YEKTYDWNQVDPKLIMEQSDRESGRGKRTFLYQLHKLIVLST
NT seq
4269 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgcaagctgaccctcgaccagatcaacgactggttcaccatcggcaagacagtg
gccaatgtggagctcctggggtctccgcccacctttcctgctggccctcctgggcttggg
ccgcaggctcatcgtgctcaaccccaggcttatgcccaggcccaggccgagatggaggcc
gaggccgaggccctgactcaggcggaggcgaggagcagagaggaggctcggcgaccaccc
ccgagtgaccaggcggcatcggcagcgggtggcagcgttggcagcagacaggctcatgct
cgagccgtgacctccccggtggttggcgggctgcatgagaaaaagagccctgaaatggaa
tatataaacaaatacagacaattagaagctcaagaatttgatgtgtgcaacagtgatcat
tcaagcagtggaccaggtccaaagcaacctttatataaatcaagcagtgtgccgtctatc
ccagaaacaaattacaaatatcctgatttgcctataattcggtgtaaggaagaggttatt
tctttgatagaaagcaattcagttgtaattattcatggtgcaactggtagtggaaaaagc
actcagcttcctcagtatatcttggattattatattcaccgttctacatactgcaacatt
gtggttactcagccacggaaaataggtgccagtagcatcgcaagatggattagtaaagag
agatcttggactttgggtggtttggtaggatatcaggttggactagagaaaatagcgacc
aaagatacaaagttaatttacatgaccactggtgtgctgcttcagaaaatagttggtgcc
aaaagtttggcagaattcactcatgtcttcattgatgaagtacacgaacgtacagaggaa
atggattttctcttgttggttgtccgcaaacttttaaggacaaactcacgttttgtgaag
gtaattctgatgtcagctactatcagttgtagagaatttgctgactattttgctgttcca
gttcagaacaaaatgaatcctgcttatgtgtttgaagtggaaggcaagcctcacacaatt
gaagaatattaccttaatgattttgtacatgttaatcttatgaagcttcctcaacagctc
atagatgaaccaatgataacaaaagaaatgtatgaaattgccgtttccttgattcagttg
tttgacgaattggatatgaaagagaatggggacaagaccttgtcaagtaccagctttgtg
tcagaacgcagtagtgtattggtttttttgccaggtttaggtgaaataaactacatgcat
gaactccttacaaacatggttcacaaaagattgcaggtttatcctctccattccagtgtg
actttggaagaacaaaataatgtatttttaactccagtccctgggtacagaaagagtatt
ttatctacaaatatagcagagagctctgtcacagtcccggatgtcaaatatgttatagat
ttttgtttgactagaacgctcgtttgtgatgaagacactaattaccagagtctccgactg
acttgggcttctaaaaccagttgtaatcagagaaaaggtcgggctgggcgtgtatctaaa
gggtactgttatagactcatctgcaaggacttttggatcaattgcatcccagatcatgta
gttcctgagatgctgcgatgtccattaggaagcacaatcttaaaagtaaagttgcttgat
atgggtgagccaagagctttgctggcaactgctctttctccacccagccttggtgatatt
gaacggaccatccttctgctaaaagagataggagcacttgctgttagtgggcagagagaa
gaagaaaatccccacgatggtgaactgactttcttaggacgggttttggcccagcttcct
gtggatcagcagcttggtaaattaatagtacttggacatgtctttggctgtctagaagag
tgccttatcatagctgcatctctctcattgaagaatttttttgcgatgccttccagacag
catcttgatggatataggaataaaatgaaattttctggcaacagtaagagtgattgtatt
gcacttgttgaagcttttaaaacctggcaggcctgcagacaaagaggagaatttcgtcat
ccaaaggatgagcttgactggggacggttaaattatattcagatcaagagaattagagag
gtagctgagttatatgaagaactgaaaaatcgcatcacacaattcaacatgtgtgtggat
actcagagacctgtgatggaccgtgaatatatctataaacagagattcatcctgcaggtt
gtattggctggtgctttctacccaaattactttacttttggacagcctgatgaagaaatg
gcaataagggagcttgctggcaaagatcctaaaacaactgtagtgctgaagcatattcct
ccctatggatttatctactacaaacaacttcagtctctctttaggcagtgtggtcaagta
aaatccattgtgtttgatggtacaaaggcatttgtggaattttctcgtaatccaacagaa
agatttaaaactcttcctgctgtgtatatggcaattaagatgtctcagctaaaagttcca
cttgaactcagtgttcacaccggtgaagaaattgaagggaaggtgcaaggaggctcagtt
acaaagctgaggaacacaagagtgaacgtggacttccagaagcagacaattgacactatg
cagatctcattagatgctctagagcagtcacgagcaattacaagccttctcttaaccatt
gaggtcactgaggttgtagaagttggtcacttctggggttataggattgatgaaaaaaac
acaaatattctgaaaaagctaacagttgaaataaaccagctgaaattggtgcctttgcta
gttcgtccatatcctgatttagtttgtctggcaccatttgccaatttgaataaagaaacc
tactttagagctcaaatcctatatgtttctggaaattctgttgaggtcttttttgtagat
tatggtaataggtctcatgtaagcctagaccttttaatggaaatcccttgtcatcttcta
gagcttccatttcaggctctggaattcaagatttgcaagatgcgtccttctgcaaagtct
cttgtatgtggagaacattggagttatggggccagccaaaggttcgctgctttagtcaat
ggctctgctctcatagtgaaagtttattcggtcgtacacagtgttctacacgtggatgta
tatcgttactctggaattaaagaagtggtgaacgttcgagatatgcttgtcaaagaatgc
tatgctgagttagcagaggagtcttatgaatctaaacaaagcaatgaaatgctgaaggaa
ttcttttccaagtcagtggaaaatgctgccagtgcaactataccaccatcaattcacagt
aaagaggatgaaaagtttctgatccgaatattgttagacagcttttctgctaataaactt
ggtgccccaaattgtaaggtactacttcatggtccttttaatccctacgagctcaagtgt
cacagtatgacccgaatatctaagttcaggtgtgtatggattgaaaaagagagtataaac
tctgttattatcagcgatgcccctgaagacctccaccagcggatgttggttgctgcttct
ctttcagtaaatgcaactggatctactatgctactgagagaaacctctctgatgcctcat
attccgggactgccagcattgcttagtatgttgtttgccccagttatggaactgagggtt
gatcaaagtggaaagtgttacactggtgccctttgtggtttggggtggaatccaactact
ggaacaccagtactgccagagcatgacattgagttggcatttgatgtccagttgaatgtg
gaagacatcgttgagattaacattcttcgggtagctattaacaagatagtttgtgatgga
ccaaatgggtgcatgtatcttgggcctgaaagaattgcacagctacaagataatgctcgg
cagaaacttttaggtctgttctgcaaattgaaaccaagagaaataattgttcccacatgg
tatgaaaaaacatatgattggaatcaggtagatccaaagctgatcatggaacagtctgac
agggagagcggaagaggaaaacgtacattcctctatcagcttcataaactgattgtatta
agtacctag
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