Phascolarctos cinereus (koala): 110198034
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Entry
110198034 CDS
T05867
Symbol
ATG16L1
Name
(RefSeq) autophagy-related protein 16-1 isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
pcw
Phascolarctos cinereus (koala)
Pathway
pcw04136
Autophagy - other
pcw04140
Autophagy - animal
pcw04145
Phagocytosis
pcw04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
110198034 (ATG16L1)
04140 Autophagy - animal
110198034 (ATG16L1)
04136 Autophagy - other
110198034 (ATG16L1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
110198034 (ATG16L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcw04131
]
110198034 (ATG16L1)
03029 Mitochondrial biogenesis [BR:
pcw03029
]
110198034 (ATG16L1)
Membrane trafficking [BR:
pcw04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
110198034 (ATG16L1)
Others
Specific organelles associated proteins
Auto phagosome
110198034 (ATG16L1)
Mitochondrial biogenesis [BR:
pcw03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
110198034 (ATG16L1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
ATG16
WD40
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
WDR55
WD40_Gbeta
Beta-prop_WDR3_2nd
EIF3I
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_2nd
DSE1_N
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_Aladin
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_VPS8
WD40_RFWD3
eIF2A
Beta-prop_IFT140_1st
Beta-prop_NOL10_N
Beta-prop_EIPR1
NBCH_WD40
CFAP251_N
Beta-prop_NWD2_C
Tricorn_2nd
Beta-prop_DCAF12
Beta-prop_HPS5
Ge1_WD40
Beta-prop_ACSF4
INO80F
ASA1
HEF_HK
Beta-prop_WDR19_2nd
WHD_CYT4
CCDC93_CC
Fez1
TMA17_helical
Motif
Other DBs
NCBI-GeneID:
110198034
NCBI-ProteinID:
XP_020827788
UniProt:
A0A6P5J362
LinkDB
All DBs
Position
Unknown
AA seq
623 aa
AA seq
DB search
MSTGLRGAGLPSWKRHIAEELRRRDRLQRQAFEEIIAQYNKLLEKSDLQSVLADKLQAEK
YDLQSRHEISPGHDGTWNDAQLQEMAQLRIKHQEELTELHKKRGELAQSVIDLNNQMQQK
DREMQMNEAKIAECLQKIRELETECQELRNKLQDLERANQTLKDEYDALQITFTALEEKL
RKTTEDNQELVTRWMAEKAQEANRLNAENEKDSRRRQARLQKELAEAAKEPLPVEPDDDI
EVLVDEASDAAEETSPIRAVSRTATKRLSQPAGGLLDSITNIFGLSESPLLGHHPSDAAR
RRSVSSFPVPQDNPDAHPTSSKEVRVPTTAVYVFDAHDGEVNAVQFSPGSRLLATGGMDR
RVRLWEVFGDKCEAKGSLSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDNRLRHTL
TGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVMS
GHFDKKIRFWDIRSESIVRELELLGRITALDLNPERTDLLSCSRDDLLKIIDLRVNAVKQ
TFSAPGFKCGSDWTRVVFSPDGSYVAAGSAEGSLYIWSVLTGKVDKVLSKQHSSSINAVA
WSPSGTHVVSVDKGNKAILWSEY
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgggtctccggggagccgggctcccgagctggaagcgccacatcgcggaggag
ctgcggcggcgggaccggctccagaggcaggccttcgaggagatcatcgcgcagtataat
aagttgctggagaaatcagatcttcagtcggtgttggctgacaaactacaagcagaaaaa
tatgacttgcaaagcaggcacgagatcagtccaggacatgatggcacgtggaatgatgct
cagctacaagaaatggcccagctgaggattaaacatcaagaagaattaactgaattacat
aagaaacgtggggagttagctcagtcggtgatcgacctgaataaccagatgcaacagaag
gaccgagagatgcagatgaatgaagcaaaaatcgctgaatgtttgcagaaaatcagggag
ctggaaactgagtgccaagaacttcgaaataaactgcaggaccttgaaagagccaaccag
acactgaaggatgagtatgatgccctgcagatcacctttactgccttggaagagaaactg
aggaagaccactgaggacaaccaagagctcgtcactcgctggatggctgagaaggcccag
gaggccaatcgtctcaatgcagagaacgagaaggattctcgacgccgccaggcccggctg
cagaaggagcttgcagaagctgccaaggaaccattgcctgtagaaccggatgatgacata
gaagtgcttgtggacgaagcttcagatgcagccgaggagacgtcgcccattcgagcagtc
agccggacagccactaagcgactctcccagcctgctggaggccttctggactctatcact
aatatctttggtctgtccgagtctccccttttgggacaccacccttctgatgctgccagg
aggcgttctgtctcctccttccctgttcctcaggataacccagatgctcatcctacttct
agtaaagaagtgcgggtccccacaactgcagtttatgtctttgacgctcacgatggagaa
gtgaatgccgtgcagttcagccctggctcccggttactcgccacaggaggcatggatcgg
agggtcagactttgggaagtgtttggagataaatgtgaggcgaagggctccctttctggc
agtaatgcaggaatcaccagcattgaatttgacagtgctggatcttatctcttggcagct
tcaaatgattttgccagcaggatctggactgtggacgataaccggttacggcacacactc
acagggcacagtgggaaagtcctgtctgccaagttcctgctggacaacgcccggatcgtt
tcaggaagtcatgaccggaccctcaaactctgggatctgcgtagcaaagtctgtataaaa
acagtatttgccggatccagttgcaatgatatcgtctgcacggaacagtgtgtaatgagt
ggacattttgacaagaagatccgtttctgggacataagatctgaaagtatagtccgggaa
ttggaactcttggggaggatcacagccctcgacttgaacccggagagaacagacctctta
agttgttcccgagatgatctcctaaaaattattgacctacgagttaatgctgtcaaacag
accttcagtgctccgggattcaagtgtgggtctgactggacccgagttgtattcagccct
gatggcagctacgtagcggctggctcagcagaggggtctctctacatctggagcgtgctc
acgggcaaggtggacaaggtcctttcgaagcaacacagttcttcaattaatgcagtggca
tggtcaccttctggcactcacgtggtcagtgtggacaaaggaaacaaagctattctgtgg
tctgaatactga
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