Phascolarctos cinereus (koala): 110198299
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Entry
110198299 CDS
T05867
Symbol
CIITA
Name
(RefSeq) MHC class II transactivator isoform X1
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
pcw
Phascolarctos cinereus (koala)
Pathway
pcw04612
Antigen processing and presentation
pcw05145
Toxoplasmosis
pcw05152
Tuberculosis
pcw05164
Influenza A
pcw05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
110198299 (CIITA)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
110198299 (CIITA)
09171 Infectious disease: bacterial
05152 Tuberculosis
110198299 (CIITA)
09174 Infectious disease: parasitic
05145 Toxoplasmosis
110198299 (CIITA)
09163 Immune disease
05340 Primary immunodeficiency
110198299 (CIITA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pcw01001
]
110198299 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
pcw04054
]
110198299 (CIITA)
Enzymes [BR:
pcw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
110198299 (CIITA)
Protein kinases [BR:
pcw01001
]
Serine/threonine kinases: Other
TAF1 family
110198299 (CIITA)
Pattern recognition receptors [BR:
pcw04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
110198299 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
LRR_14
NLRC4_HD2
LRR_8
LRR_9
CARD
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
110198299
NCBI-ProteinID:
XP_020828169
UniProt:
A0A6P5JAL3
LinkDB
All DBs
Position
Unknown
AA seq
1181 aa
AA seq
DB search
MDQFKAILPQVRALLSSAWPAQVQGFLDGLLEKDLLSKEYHQALLREPDREALARKVSLS
LLEKWDLCIGTLIQCVRHSGHKLQSPGMDGISSRSQATDQCAAMESGPLAEGSYLGLLQS
DINPLQLFHFYDQHLAAEEEIEYSSDPDTDTINCDQVNRLWNAIEDEGTGEAYDRIAALA
EYMFSDRHLEAEGIFGNIGPDEVVNENTDALTEIPQKSQKCQKRLFLDNPEPQSDSWEAK
RRKPEASPDTPLVTSNLMTVSSSNNLALKGSLSPLPGQVAKPSLLSMEETFLVPTSPVLA
CLNFNGEPIQLIPTFPTLPQGVFHFTVENGISNIFLYPASSGGDTIIQSLPVSPDRHGST
SPFTPSAADMPNMPEASALTSQDRKTESVERFCRALQKAYEDVPEGPNSHYIDLDLTRTQ
VEKNNKNQEKELAIQDWTERQKARVGWREVFASTRGQKRETRVIAVLGKAGLGKSAWTQQ
VCRNWAQGQLPQYEFVFHYKCRSLNLPGNDYCLKDLFFRLYNHPLEASEEVFKYILKHPN
RILVILDSFEELEGQDGFLNCPASPSPGESRPIKGLLAGLFQRKLLRGCTLLITARPKGR
FIQYLAKVDSLLEVQGFSPEQVESYFEKYFQGSPSDRDEALRLVRAQPYLLSHCYSPAVC
LSLCRLCEKILATKGPAQLPSTLTGLFVSLLCSVLRARERGPSETWPRNCLAGLTKLAWE
LGQRHCNVLREDQLPSTEVKEFAILEDFVSPFPTAREPEMAFLLQNFLGALRLALSEEVR
DKELPRYLALTPRKKKPYDNWLERVPPFLTGLLFQPLSSCLGPLGGNEQVGLICKRQKAL
LNYLTRLQPGTLGPGRLLELLHCAHEATDSHLWQHVTAGLPSCLSFRGVRLAPPDVHVLG
EALKAAGKHFSLDLRNTSIDLHGLGILVQLGCVTCFRASLSDTVWLWESLRQSGEYELFR
SSTEKFTIDPFKVKSMKDVEDLCSLVNIQGSGNAAREACDPLPAIRDLKNLEFALGPVLG
PQGFPKLVTILAAFSSLQHLDLDTLHGNKIGDEGVAQLSAIFPELKALETLNLSQNSITD
VGAMELAKALPTLATSLVTLSLYNNCICDTGAENLASVLPNMVSLRVLDVKYNKFTRAGA
QQLTASLKKCPHIETLAMWNPTIPYGVQEHLQQLDSRISLR
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atggaccagttcaaagcaatcctgccccaggtgagagcattgctctccagtgcttggcct
gcccaggtacagggctttctagatggtcttctggaaaaggacctcctctccaaagagtac
caccaggctctgctccgagaacctgatagagaagcattggccaggaaggtttccttgtcc
ctgttggagaagtgggatctatgcataggaaccctgatccagtgtgtgagacactctggg
cacaagctccagtctccagggatggatggcatctcctcaaggagtcaagctactgatcag
tgtgcagccatggaatctgggccattggcagaaggaagctacctggggctactccaaagt
gacatcaaccccctacaacttttccatttttatgaccagcatctagcagcagaagaagag
attgagtactcttcagatcctgatactgacacaatcaactgtgatcaggtcaacaggctg
tggaatgccatagaagatgaggggacaggagaggcctatgacaggatagcggcactggca
gaatacatgttctcagatcgacacctagaggcagaaggcatttttggcaacattggccca
gatgaggtggtcaacgagaatacagatgcattgactgagataccacagaaatcacagaaa
tgtcagaaaagattgtttctggataaccctgagcctcagtcagacagttgggaggccaaa
cgcagaaagccagaggcatctccagatactccattggtaaccagcaatttaatgacagtg
tcttctagcaacaacttggccctgaagggctctctgtctcctctcccaggtcaggttgcc
aagcccagtctgctctccatggaggaaaccttcctggtgcccaccagtcctgttcttgcc
tgcctgaacttcaatggggaacccatccaactcatccccaccttccctactctgcctcaa
ggtgtcttccacttcacagtagaaaacgggatctccaacatcttcttatacccagcttca
tcagggggtgataccatcatacagagcctcccagtatccccggacagacacggttccacc
agtccatttacgccatcagcagcagatatgcccaacatgcctgaggcctcagctctaacc
tcacaagacagaaaaacagagtctgtggaacggttctgtcgtgctctacagaaggcttat
gaggatgttccagaaggtccgaacagccattatattgatctagacctcacaagaacacag
gtggagaaaaataacaagaatcaggagaaagaattggcaatccaggactggacagagaga
cagaaggcccgtgtgggatggagagaggtgtttgccagcaccagagggcagaagagggag
acacgggtgattgcagtactgggcaaggctggtctgggcaaaagtgcctggacccagcaa
gtctgtaggaactgggcccagggccagcttccccaatatgaatttgtctttcactacaag
tgccgcagcctgaacctgccagggaacgactactgtttgaaggatctgttttttagactc
tataatcacccattggaagcgagtgaggaagtcttcaaatatattttgaagcacccaaat
cgcattctggtcattctggactcctttgaggagctggaggggcaagatggctttctgaat
tgtcccgccagcccctctcctggggagtcacggcccatcaaagggctgctggctggcctc
tttcaaaggaagctcctgaggggctgtacattgctgatcacagccaggccgaaaggaagg
tttatccagtacttggccaaggtagacagcctcctggaggtgcagggcttctctcctgag
caggtggagtcttactttgaaaagtacttccagggttcaccatcagacagggatgaggcc
ttgaggctcgtccgggcccagccctacctgctcagtcactgctacagccctgctgtgtgc
ctttccctctgccggctttgtgagaaaatcctggccacaaagggtccagcccaacttccc
tccacactcacaggcctctttgtcagcctcctctgctcagtactgagagccagggaaagg
gggccatctgaaacctggcccaggaactgcctggcaggcttgacaaagttggcatgggaa
ctaggccagagacattgcaatgtcctgagagaagatcagctcccctccacagaagtgaag
gaatttgccattttggaggattttgtgtcaccattcccaacagccagggaaccagagatg
gcctttctcctgcagaacttcctaggagctttgaggctggcacttagtgaggaagtaaga
gacaaagaactcccaaggtacttagccctgactcctaggaagaagaaaccctatgacaac
tggctggagcgggtaccccccttcctgacggggcttctcttccaacccctgtcctcctgc
cttgggccccttggtgggaatgagcaggttgggctcatatgcaagaggcagaaggcactc
ttgaactatctgacccgactacagcctgggacactggggcctgggaggctccttgaactc
ttgcattgtgcccatgaggcaactgacagccacctatggcagcatgtaacagctggacta
ccctcctgcctttccttccggggtgtacgcctggccccaccagatgtgcatgttttgggt
gaagccctgaaagcagctggcaaacacttctccctggatctcaggaacacctccattgac
ctgcacgggctagggatccttgtccaacttggctgtgtcacctgtttcagggcatctcta
agtgacacagtgtggctgtgggaatcccttcggcagagtggggaatatgaactattccga
agttccactgagaagttcaccattgatcctttcaaggtcaaatccatgaaggatgtggag
gacctttgtagcctggtgaatatccaaggctcaggaaatgctgctagagaggcctgtgat
cctcttcctgccatcagagacctgaagaatcttgagtttgcacttggcccagtgttgggt
ccccagggctttccgaaattggttacaatacttgcagctttttcatcccttcagcatttg
gacctggacaccctacatggaaacaagattggcgacgaaggtgtagctcagctctctgcc
atctttccagagctaaaggctttagaaaccctgaacttatctcagaatagcatcactgat
gtgggagctatggagttggccaaggctctgccaacactggccacatcccttgttacgctg
agcttgtacaacaactgtatctgtgatactggagccgagaacctcgctagtgtgcttccc
aacatggtgtccctgagagtgctggatgtcaagtataacaagttcacaagggcaggagcc
cagcagctcacagccagtctgaagaaatgtccacatattgagacactggcaatgtggaac
cccaccattccttatggggttcaggaacatttacaacaactggactcccgaataagcttg
cggtaa
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integrated database retrieval system
