Phascolarctos cinereus (koala): 110198828
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Entry
110198828 CDS
T05867
Symbol
COL6A2
Name
(RefSeq) collagen alpha-2(VI) chain isoform X1
KO
K06238
collagen type VI alpha
Organism
pcw
Phascolarctos cinereus (koala)
Pathway
pcw04151
PI3K-Akt signaling pathway
pcw04510
Focal adhesion
pcw04512
ECM-receptor interaction
pcw04820
Cytoskeleton in muscle cells
pcw04974
Protein digestion and absorption
pcw05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
110198828 (COL6A2)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
110198828 (COL6A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
110198828 (COL6A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
110198828 (COL6A2)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
110198828 (COL6A2)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
110198828 (COL6A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pcw04147
]
110198828 (COL6A2)
00536 Glycosaminoglycan binding proteins [BR:
pcw00536
]
110198828 (COL6A2)
Exosome [BR:
pcw04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
110198828 (COL6A2)
Glycosaminoglycan binding proteins [BR:
pcw00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
110198828 (COL6A2)
Hyaluronan
Extracellular matrix or blood plasma proteins
110198828 (COL6A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
DotU
Motif
Other DBs
NCBI-GeneID:
110198828
NCBI-ProteinID:
XP_020828994
UniProt:
A0A6P5JD21
LinkDB
All DBs
Position
Unknown
AA seq
1020 aa
AA seq
DB search
MFRKLFPTLLVWGLLGPLHAQPQTAFFEGSTTDRASNCPEKTDCPINVYFVLDTSESVTM
QSPIDSLLSQTQQFLLQFTSQLKNQHYRDQVAISWHYGGLHFSDEVEVFSPLGSDEATFK
SRLQKIRSFRRGTFTDCAISNMTQEITRNPSKGINFAIVITDGHVTGSPCGGIKMQAERA
RDMGIKLFSVALNQNKNDHGLREIANLPHELYRNNYLTIREDSSIDQETIDRIIKVMKHE
AYSECYKVSCLQIQGPAGPKGYRGQKGAKGNMGEPGEPGQKGRQGDPGIEGPIGFPGPKG
VPGFKGEKGEYGGDGRRGAAGLAGKNGTDGQKGKRGRIGPPGCKGDPGDRGLDGYPGEAG
SPGEQGDQGSKGDSGRPGRRGPPGLDGEKGNPGYQGNNGAPGSPGIKGAKGGPGPRGPRG
EQGRRGDPGAKGSPGNDGPKGEKGDPGPEGPRGLAGEIGNKGAKGDRGLPGPRGPQGSLG
EPGKQGSRGDPGDVGPRGESGPPGPKGDRGRPGFSYPGPRGEPGEKGEPGPPGPEGGRGD
FGIKGAPGRKGEKGEPADPGPPGEPGPRGPKGSPGPEGEPGPPGDPGLTECDVMTYVRET
CGCCDCVKHCGALDIVFVIDSSESIGYTNFSLEKNFVINVVNRLGSITKDPNSDTGTRIG
VVQYSHDGTFEAIKLDDERITTLSQFKEEVKKLEWIAGGTWTPSALNYTYNALIKGSRRK
KTKVFAVVITDGRHDPRDDEQSLTALCNTVENVVVTAIGIGDMFNEQHESESLRSIACNQ
KGQVRNMTLFSDLVAEKFIDEMEAFLCPDPQIVCPELPCQTELYVAQCTQRPVDIVFLLD
GSERIGERNFHKAHRFVEEVARRLTLARRHNDPMNARVALLQYGNEREQEVVFPLTSNLT
VIHDALSNIRYLNSFSHIGTGIIHAINNIVMDQQAGARRNAELSFVFITDGITGEMSLNE
SLHSMRKQDVVPTVLALGNDVDMDLLLKISLGDRSAIFQEKDYDSLAQPSFFDRFIRWIC
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgttccgaaagctgttccccacgctcctggtctggggcctcctgggcccccttcatgct
caaccacaaacagcgttctttgaaggcagcaccacggacagagccagcaactgcccagag
aaaacagactgccccatcaacgtgtacttcgtcctggacacctcggagagtgtaaccatg
cagtcgcccattgacagtctcttgagccaaacacagcaattcctcctgcagttcaccagc
cagctgaagaatcagcactaccgtgaccaggtggccatcagctggcattatggaggcctg
cacttctcggacgaggtggaagtcttcagccccctgggcagcgatgaagccaccttcaaa
tccaggcttcagaaaatcaggtccttccgccgaggcaccttcacagactgcgccatctcc
aacatgacccaggagatcacgagaaatcccagcaagggcatcaactttgccatcgtgatc
actgatgggcacgtgaccggaagcccgtgcgggggcatcaagatgcaggctgagcgagcc
cgcgacatggggatcaagcttttctctgtggccctcaaccaaaacaagaacgatcatggg
cttcgggagatcgccaacctcccccatgagctctaccggaacaactacctcaccatcaga
gaggactcatctattgaccaggagaccatcgacagaatcatcaaggtcatgaaacacgaa
gcatattcagagtgctacaaggtgagctgcctgcagatccaaggccctgctggtcccaag
ggttatcgaggacagaagggtgctaaggggaacatgggtgagccaggcgaacctggacag
aaaggacggcagggagacccaggcatcgagggccccattggcttcccaggacccaagggt
gtccccggcttcaaaggcgagaagggtgaatatggcggagatggaagaaggggagctgcg
gggctggcaggcaagaacgggacagatggacagaaggggaagcggggacgcattggaccc
cctggctgcaagggggaccccggtgacaggggcctcgatggttacccaggggaagctggc
agcccaggagaacagggagaccagggcagtaagggagattctggccgcccaggacgccga
ggacccccaggactggatggagagaaaggaaacccgggttaccaaggcaacaacggagcc
ccaggaagcccaggcatcaagggagctaagggagggccaggacccagaggacccagggga
gagcagggccgtcgaggagaccccggagccaaaggtagccccggaaatgatgggccaaag
ggagaaaagggagaccctggccccgagggacccagaggcctggcaggagaaattgggaac
aaaggagccaagggtgaccgcggcttgcctgggcccagaggacctcagggcagccttgga
gagcccgggaaacagggatcacgcggggacccaggggatgttggtcccaggggagaatca
ggacctccaggacccaagggagaccgaggtcgacctggcttcagttaccctggacctcga
ggagaaccgggagaaaaaggcgagcctggtcccccaggcccagagggcggaagaggggac
tttggtatcaaaggagccccaggtagaaagggagagaaaggagagccggcagatcctggc
ccccctggagagcctggccccagaggacccaaaggatctccaggcccagagggtgaacct
ggtccccctggagaccctggcctgacggaatgtgacgtcatgacctatgtgagggagaca
tgcggctgctgcgactgcgtgaagcactgtggggctctggacatcgtgttcgtcatcgac
agctctgagagcattggttataccaacttctcactggagaagaattttgtcatcaatgtg
gtcaacaggctaggttccatcaccaaggatcccaactcagacacagggactcgcatcggg
gtggttcagtacagccacgacgggaccttcgaggccatcaagctggacgatgagcggatc
accaccctttcgcaattcaaggaagaggtgaaaaagttagagtggatcgcggggggcacc
tggacgccctcggccctgaattacacctacaacgcgctcatcaagggcagcaggcggaag
aagacgaaggtgttcgcggtcgtcatcacagacgggcgccacgacccccgcgacgacgag
cagtccctgacggccttgtgtaacacggtggagaacgtcgtggtcacggccatcggcatc
ggggacatgttcaacgagcagcacgagagcgagagcctcaggtcgatcgcctgcaaccag
aagggtcaagtccgcaacatgaccttgttctccgacttggtggctgagaagttcatcgac
gagatggaagctttcctctgcccagatccacagattgtctgccccgagcttccctgccaa
acagaactgtacgtagcccagtgcacccaacggcctgtcgatattgtcttcctgctggat
ggctcagagaggatcggggagcgcaactttcacaaggcccaccgctttgtggaggaggtg
gcccggcggctgaccctggcgcggcgacacaacgaccccatgaatgcccgcgtggccctc
ctccagtacggcaacgagcgggagcaggaagtcgtcttcccgctcacctccaacctgacg
gtgatccacgacgccctcagcaacatccgatacctcaactccttctcccacatcggcacc
ggcatcatccacgccatcaacaacatcgtcatggaccagcaggcgggggcccgccgcaac
gccgagctctccttcgtcttcatcacggacggcatcaccggggagatgagtctgaacgag
tccctgcactccatgcgcaagcaggacgtcgtgcccaccgtgctggccctggggaacgac
gtggacatggacctcctcctgaagatcagcttgggtgatcggtccgccatcttccaagag
aaggactacgacagcctggcccagcccagcttcttcgacaggttcattagatggatctgc
tag
DBGET
integrated database retrieval system
