Phascolarctos cinereus (koala): 110199417
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Entry
110199417 CDS
T05867
Name
(RefSeq) LOW QUALITY PROTEIN: antigen peptide transporter 2-like
KO
K05654
ATP-binding cassette, subfamily B (MDR/TAP), member 3 [EC:
7.4.2.14
]
Organism
pcw
Phascolarctos cinereus (koala)
Pathway
pcw02010
ABC transporters
pcw04145
Phagosome
pcw04612
Antigen processing and presentation
pcw05163
Human cytomegalovirus infection
pcw05168
Herpes simplex virus 1 infection
pcw05169
Epstein-Barr virus infection
pcw05170
Human immunodeficiency virus 1 infection
pcw05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
110199417
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
110199417
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
110199417
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
110199417
05168 Herpes simplex virus 1 infection
110199417
05163 Human cytomegalovirus infection
110199417
05169 Epstein-Barr virus infection
110199417
09163 Immune disease
05340 Primary immunodeficiency
110199417
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcw02000
]
110199417
Enzymes [BR:
pcw01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.14 ABC-type antigen peptide transporter
110199417
Transporters [BR:
pcw02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
110199417
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
AAA_22
AAA_30
AAA_23
AAA_29
Methyltranf_PUA
AAA_15
Zeta_toxin
AAA_16
Motif
Other DBs
NCBI-GeneID:
110199417
NCBI-ProteinID:
XP_020829927
UniProt:
A0A6P5J6I4
LinkDB
All DBs
Position
Unknown
AA seq
707 aa
AA seq
DB search
MRLPALKPWVPILLTDLILPWLLQERECTLFLPGLSGLWVEGAFRVGVLWGVLSFLGGLG
KVGELLPTLCLSTPLFLSLRALVPGALSAPPVLPASAPWTWMLVSYGGVGLGWAVWKVLS
LSEPLPSAQQSQKNKAMMWRLLRLSWPDLPFLVAAFIFLAAAVIGEMFIPHYTGRVIDIL
GQDFDPDASATAIFFVCLFSLGSLFFAGCRGGLFTIVLSRINLRIRRLLFSSLLHQDLSF
FQKTKTGELNSCLSSDTILMSRWLPGNANVFFQNLMKVIGQYIFMLNLSPWLTLLSLAEI
PLLMAAEKVYNARHQAVLRRMQDTVARARQVVQEAVGSLRTVRSFGAEENEAQRYKEALE
HRQKLRWHQDMEYGVYLLFRQGLQLGMQILILNCGLKQILAGELTTGGLLSFLLYQKDVG
KCVKILLHVCGDTVSKVGAAEKVFQYLDSEPQMPTSGMLAPSTLQGLVEFQDIYFAYPTN
PKNLVLQGVTFTLYPGKVTALVGPNGAGKSSVAALLQNLYQPTGGRLLLDGEPLPQYQHQ
YLHSXVSVVGQEPVLFSGSLRENIVYGLESCGDDEVRAAAQAAHADGFIANMEHGLDTVV
GEKGSQLSAGQKQCLAIARALVRNPHVLILDEATSALDMECEQAIRERCMLQEGWTVLVI
AHHIQTVQASDHILVLEQGKLVEQGTHAQLLSQRGLYHHLLQQKLED
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgcggctccctgccctgaagccctgggttcccatcctcctgactgacctgattttgcca
tggttgttgcaggaacgggaatgcaccctattccttccagggctctctggactctgggtg
gagggggcctttcgggtgggggtgctgtggggagttctaagttttttggggggacttggg
aaggtgggagaattactgcctaccttgtgcctgagcaccccactgttcctgtccctgagg
gccctagttccaggggctttgagtgccccacctgtgctcccagcctcagccccatggacc
tggatgctggtgtcttatggaggagtgggactgggctgggctgtatggaaggtgttgagc
ctctcagaaccccttccctcagcacagcaaagccagaaaaacaaagccatgatgtggagg
ttgctgagactgtcttggcctgacttacccttccttgttgctgctttcatcttcttggct
gctgcagtcataggtgagatgttcatcccccactacactggtcgtgtgattgacattctg
ggccaagactttgaccctgatgcctctgccactgccatcttcttcgtgtgcctcttctcc
cttggaagcttattctttgcaggctgtcgaggaggtctcttcaccatcgtcctctcccga
atcaaccttcgcattcggcgtctgctcttttcttcccttctgcaccaagaccttagcttc
ttccagaagaccaagacaggggagttaaactcatgcctgagctctgacactatcctgatg
agtcgctggctccctggcaatgccaatgtgttctttcagaacttgatgaaggtcatagga
caatacatcttcatgctcaacctctcgccttggctcaccctcctttccctggctgagata
cctctcttaatggctgctgagaaggtctataatgctcgacatcaggcagtgctccgtagg
atgcaagatacagtggcaagggctagacaggtcgtgcaggaggcagtaggaagcttgaga
actgtgaggagttttggagcagaggagaacgaggcccagcgctataaggaggccctggag
catagacagaaactacggtggcaccaggacatggaatatggagtatatctgctcttcagg
cagggacttcaactagggatgcagatattgatattgaattgtgggctaaagcagatattg
gctggagagctcaccacagggggcctcctctccttcctgctttatcagaaggatgttggg
aaatgtgtgaagatcttgttgcatgtctgtggagacaccgtgagcaaagttggagctgca
gagaaggtgttccaatacctggactctgagccacagatgcccacctctggaatgcttgct
ccttctactttgcagggccttgtggaattccaagatatttattttgcttatcctaccaat
ccaaaaaacttagttctccagggagtgacattcactttgtaccctgggaaggtgacagcc
ctagtaggacctaatggggctgggaagagctcagtggctgcgttgctacagaatctgtat
cagcccacagggggccggctgctgctggatggggagcctcttccacagtatcagcaccag
tacctgcactcataggtgtctgtggttgggcaggagcctgtgctgttctcagggtcactg
agggaaaacattgtctacgggctggagagctgtggggatgatgaggtgagggctgctgcc
caggcagcccatgctgatggattcattgccaacatggagcatgggctggacacagttgtt
ggggagaaggggagccagttgtctgcaggccaaaagcagtgtctggccattgctcgggcc
ctggtgcggaatcctcatgtcctcatcctggatgaagccaccagtgccctggatatggag
tgtgagcaggcgataagggaaaggtgtatgctgcaggagggttggacagtgttggtgatc
gcacaccacatacagacagtacaggcttctgaccacatcttagtgctggagcaggggaag
ctggtggagcaggggacccacgctcagctcctgtcccagagaggcctttatcatcacctg
ttgcagcaaaagcttgaagactga
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