| Entry |
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| Symbol |
PASD1
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| Name |
(RefSeq) circadian clock protein PASD1 isoform X1
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| KO |
| K09026 | neuronal PAS domain-containing protein 2 |
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| Organism |
pcw Phascolarctos cinereus (koala)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:pcw00001]
09150 Organismal Systems
09159 Environmental adaptation
04710 Circadian rhythm
110200003 (PASD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:pcw03000]
110200003 (PASD1)
Transcription factors [BR:pcw03000]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
110200003 (PASD1)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
Unknown
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| AA seq |
892 aa
MSATGEQKEEPQVQEGGVQTMPLTNTRESEEQAGLDAVLEAGQSTSKEAKPPEPGCLKEV
MDEEEKDRLKRASRNKSEKKRRDQFNVLIQELCSMLQGQGQPIKMDKATILQKTIDFLHK
QKEKETQAQAAGARGAWKPSILSNEEFTQLMFEALDEFLIALTTEGIIIYVSDNVSSLLG
HLPSELVCQNILTLLPEQEHKEVFKILSPQTILPAPVTADFLNEKQIEFSCHLARGRVNP
NDPVIYESVKIFVDFKYLSHVPVPSCSDFESVVAKAFKSAADDPLCLVATVRLNSPQLLK
EVCTVEEPGEEFTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHADDLEPLARC
HEQLMQFGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTHTVVSYAQIQAE
RRKELGLEEPSATEMATVPFKSSDNFTDISQCGNSLDVSRERASGSSHGSCRPSLSVLSN
SACMYSARLTQCCPRNQNLQTKLSLPPRRASKAPVRWALPMDQPAKTFDKAFSREVASSS
NSSSSSSSSSQGLQFPQTFTEHLARHLVASRKMPMVSSQPEAMPLLPSPEELGVVQQLKE
DLKGQTRALQADIETQKQELHAIKDCLQTVQDPDFQTRQGTLGSFPAKTTSGLHPEESTS
LSLALPMPLQPPAPLNFKLPKPLKPKKASQRRTKVPKTATKSQPNFVEPKPYRSSTIPSV
QYLGEPCISPSQQQQQQHHVINENEIQEICVQENTSISMPLYGDPMLFSETYSITVSAEL
PIDFIQQPIEYEQDITLGFLQDDRLLPSPSAFTPAMFIPTTDLAILDTQQLPVHQWQPPQ
VPQSEVCLQIHTPEAVQGSQSPGICQAPQVLQSPSMGCFLNPQQPNTELSDI |
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| NT seq |
2679 nt +upstreamnt +downstreamnt
atgagtgccacaggagagcagaaggaagaaccacaggtacaagaaggaggagtacaaacc
atgccactgactaacacaagagaaagtgaggagcaggctgggttggacgctgtcctggaa
gcaggccagtccacatccaaagaggccaagccaccagaacctggttgcttaaaggaagtg
atggatgaagaagagaaggacaggttaaagagggcatcccggaacaagtcagaaaagaaa
aggagagatcagttcaatgttctcattcaagagctttgcagcatgcttcaggggcaaggc
cagcccatcaagatggataaggctaccatattacagaagaccattgactttttacacaag
cagaaagaaaaggaaacccaggcacaagctgctggtgccagaggggcctggaaaccatca
attcttagcaatgaggaatttacacagttgatgtttgaggcattggatgagtttctgatt
gccctgaccaccgagggaataattatttatgtatctgataatgtctcttctctgctgggc
catctaccgtcagagctggtatgccagaatatattaacccttctccctgagcaagagcac
aaggaagtcttcaagatactctctccacagacaatcctgccagcccctgtcactgctgat
tttctaaatgaaaaacaaattgagttttcctgccatttagcaagaggaagggtgaaccct
aatgatcctgtgatttatgaatctgtgaaaatttttgtggattttaaatacctttctcat
gtgcctgtaccatcctgcagcgactttgagtctgtggttgccaaggcattcaagtctgcc
gcggatgatccactttgtctggtagcaacggttcgcctcaactcaccccagcttttaaag
gaagtttgcactgtagaagaacctggtgaagaatttacctcaagacatagtttggagtgg
aagtttctcttcttggaccatagagccccacccatcataggttacctaccctttgaggtg
ctgggaacgtcaggctatgactattaccacgccgatgacttggagcctctcgccaggtgc
cacgaacaattgatgcagtttggaaaaggaaagtcctgttactatcgcttcctgacaaaa
ggccagcagtggatttggctgcaaactcactactacatcacttatcaccagtggaattcc
aagcctgaattcattgtttgcacacacactgtagttagttatgcccagattcaggctgaa
agaagaaaagaacttggccttgaagagccatcggcaacagaaatggccactgtacccttc
aagagctctgacaatttcacggatatctctcagtgtggaaacagcctggacgtgagtaga
gagagagcatctgggtcatcccatggttcctgtaggccatccctctcggtcctgtccaat
tcagcctgtatgtattctgcaaggttgacacagtgttgcccaagaaatcagaatttacaa
accaaactgtcactgccgcccagaagagccagcaaggcgccggtgaggtgggctctgccc
atggaccaaccagctaagacatttgataaggcattctccagggaggtagccagcagcagc
aacagcagcagcagcagcagcagcagcagccagggcctgcagtttcctcagaccttcact
gagcatcttgccagacaccttgtggcctcaaggaaaatgcccatggtatcctctcaacca
gaagctatgcctctactcccctctccagaggagcttggggtggtgcagcagctcaaggaa
gacctgaaaggacaaactcgggcattacaggctgacatcgaaacccagaagcaggagctc
catgcaatcaaggactgtctgcagactgtgcaagatcctgacttccaaacacgtcaaggg
acgctcggctcctttccagcaaagacaacatctggcctgcaccccgaagagagcacatct
ctttccttggcactgcctatgccgttacagccacctgcaccattgaacttcaagcttccc
aagcccctgaaaccaaaaaaggcatcccagcggcgaactaaagtacccaagacagcaaca
aaatcccagcctaatttcgtggagcccaaaccttacagaagctcaactataccttcagtc
cagtaccttggggagccttgcatttctcccagccagcaacagcagcagcagcatcatgtg
ataaatgaaaatgagatacaagaaatatgtgtgcaagagaacactagcatctccatgcct
ctctatggtgaccccatgttgttttctgagacatactccatcacagtttcagccgaactg
cccattgatttcattcaacagccgattgagtatgaacaagacatcacccttgggtttctc
caggatgatcggcttctgccttctccttcagcatttactcccgccatgttcattcccacc
actgacttagccatcctcgacacacagcagctccctgtccatcagtggcagccaccccag
gtcccccagagtgaggtctgccttcagattcatactcctgaggcagtccagggaagtcag
tctccagggatttgccaggcaccccaagtattacagtcaccctccatgggctgtttcctg
aatcctcagcagcccaacacagagctgtccgacatatag |
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