Phascolarctos cinereus (koala): 110200014
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Entry
110200014 CDS
T05867
Symbol
UPF3B
Name
(RefSeq) regulator of nonsense transcripts 3B
KO
K14328
regulator of nonsense transcripts 3
Organism
pcw
Phascolarctos cinereus (koala)
Pathway
pcw03013
Nucleocytoplasmic transport
pcw03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110200014 (UPF3B)
03015 mRNA surveillance pathway
110200014 (UPF3B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcw03019
]
110200014 (UPF3B)
Messenger RNA biogenesis [BR:
pcw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
110200014 (UPF3B)
mRNA cycle factors
P-body specific factors
110200014 (UPF3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_1
Motif
Other DBs
NCBI-GeneID:
110200014
NCBI-ProteinID:
XP_020830759
UniProt:
A0A6P5JI14
LinkDB
All DBs
Position
Unknown
AA seq
612 aa
AA seq
DB search
MLGLVVLQAKVKLILAERGGASSWTPRTAPGRTQSLAGKRGASGLGRVPSAKLECYRTRY
PAREGRGDRAVSRDRSHCATIAGESEAQGEAAALVCSLACSSGSRDSGGGHHSSSHRSGG
GAPAPAPPPPPAPAPDPGPAPAPAPAPAPAPAPAGAAASATFGGAADSAKTQERKPERFK
EKKEMLSKVIIRRLPPTLTKEQLEEHLQPLPEHDYFEFFANDSSLYPHMFSRAYINFKNQ
EDIVLFRDRFDGYVFVDHKGQEYPAIVEFAPFQKSAKKKNKKKDAKTGTIEDDPEYKKFL
ESYCAEEEKLTSTPETLLEEIEARNKELIAKKTTPLLNFLKNKQRMREEKREERRRREIE
RKRQREEERRKWKEEERRKRKDTDKIKKIERGPEKERDRSKDEPKIKLLKKPERGDEKEL
EKREKSKRLDKENLNEEKTSGQSSAAAKRSDGETKEEKAKKSEDEGGKDYRERDKDYERD
KERERQQREKEKLRRQEEDKRRQKERFEKEKTFRRKEEEMKKERDLLRDKGKRHDGTDLI
GNSDRMTKEDRKEDAAKRDRIRNKDRPAMQLYQPGARSRNRLGPYEDSPLKSAEPAPDKK
QENENNNRKEEE
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgctgggtcttgtagttctccaggcaaaagtgaaactgattctggcggaaaggggcggc
gctagctcgtggacgccaagaaccgccccagggcgcacccagagcctagccgggaaaagg
ggcgcgagcggcctcgggcgggttccatcggcaaagctagagtgttaccgtacccgttac
ccggcgagggagggcaggggcgaccgagcagtctcgcgcgatcggagtcactgcgccaca
attgcaggagaaagcgaggcccaaggagaagcggccgccctcgtttgcagtctcgcctgc
agcagcggcagcagagacagcggcggcggtcaccacagcagcagtcaccgcagcggcggc
ggcgctccggccccggctccgcccccacctccggctccggctccagacccaggcccggcc
ccagctccagccccagctccagctccagccccagctccagcaggagcagcagcgagcgca
accttcggcggcgcggcagacagcgccaagacccaggagagaaagccggagcgattcaaa
gagaagaaggagatgctgagcaaggtgatcattcggagattgcctcctactttgactaag
gaacagcttgaagaacaccttcagcctctgcctgaacatgattattttgagttctttgca
aatgattctagtttgtatcctcatatgttttctagagcatacatcaactttaaaaaccag
gaggacattgttttgttcagggatcgctttgatggttatgttttcgttgatcataaaggt
caggagtatcctgccatagtggaattcgctcctttccaaaaatcagccaaaaagaagaac
aagaagaaagatgccaaaactgggactattgaggatgaccctgagtacaagaaatttttg
gagagttattgtgcagaggaagagaaactgacgtccactccggagactctgttagaagaa
atagaagcgagaaataaagagctgatagccaagaagacaactccccttttgaacttcttg
aaaaataaacagaggatgagggaagaaaagagagaagagagacggcggagagagattgag
agaaaaaggcaaagagaagaagaacggagaaaatggaaggaagaagagagaagaaaaaga
aaggatacggacaagataaagaagattgaaagaggtccagaaaaagagagggatagatca
aaggatgaaccaaagattaagctgctcaagaagccagaaagaggagatgaaaaagaattg
gaaaaaagggaaaaatccaagagattggacaaagagaatctgaatgaggaaaaaaccagt
gggcagagtagtgccgcggccaagcgttctgatggggagacaaaagaagagaaggccaag
aaatctgaagatgagggtggcaaagactacagggagagggacaaggactatgaaagagac
aaggagcgagagaggcagcaacgagagaaggagaaactgaggcggcaggaagaagacaaa
aggaggcaaaaggaacgctttgagaaagagaagacctttagaagaaaagaagaagaaatg
aaaaaggaaagagatctacttagggacaaaggaaagaggcatgatggtacagatttaata
ggcaactcagacagaatgaccaaagaggacagaaaagaagatgcagcgaaaagagatcgc
ataagaaacaaggaccgcccagcaatgcaactctaccagccaggtgcccggagccggaat
cgcctgggaccctacgaagacagccctttgaaatctgcagagccagctccagataaaaag
caagagaatgagaacaataataggaaagaagaggaatga
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