KEGG   Phascolarctos cinereus (koala): 110200056
Entry
110200056         CDS       T05867                                 
Symbol
LINGO1
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1 isoform X1
  KO
K23533  leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
pcw  Phascolarctos cinereus (koala)
Brite
KEGG Orthology (KO) [BR:pcw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pcw04131]
    110200056 (LINGO1)
Membrane trafficking [BR:pcw04131]
 Endocytosis
  Lipid raft mediated endocytosis
   RhoA-dependent endocytosis
    110200056 (LINGO1)
SSDB
Motif
Pfam: LRR_8 LRR_5 LRR_4 I-set Ig_3 ig Ig_2 LRR_9 LRR_LRWD1
Other DBs
NCBI-GeneID: 110200056
NCBI-ProteinID: XP_020830819
LinkDB
Position
Unknown
AA seq 619 aa
MQVRERMIAGDASMHTPILACWQPILLLVLGSVLSGSATGCPPRCECLPQERSVLCHRKR
FIAVPEGIPTETRLLDLGKNRIKTLNQDEFASYPHLEELELNENIVSAVEPGAFNNLFNL
RTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVY
ISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRL
KVLEISHWPYLDTMTSNCLYGLNLTSLSITHCNLTAIPYVSVRHLVYLRFLNLSYNPILT
IEGSMLHDLLRLQEIQLVGGQLMMVEPYAFRGLNYLRILNVSGNQLTTLEESAFHSVGNL
ETLILDNNPLACDCRLLWVFRRRWRLNFNKQQPTCATPEFVQGKEFKDFPDVLLPNYFTC
RRARIRDRKPQQVFVDEGHTVQFVCRADGDPPPAILWLSPRKHLISAKSNGRLTVFPDGT
LEVRYAQIQDNGTYLCIAANAGGNDSMLAHLHVRSYSPDWPHQPNKTFAFISNLPNESDA
NSTRTTVPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNTKHNIEIEYVPRK
SDAGISSADAPRKFNMKMI
NT seq 1860 nt   +upstreamnt  +downstreamnt
atgcaggtgagagagaggatgatcgccggggacgctagcatgcacacccccatcctggcc
tgctggcagcccatcctcctgctggtgctgggctctgtcctgtccggctcggccaccggc
tgcccgccccgctgcgagtgcttgccccaggaacgctcggtcctttgccaccgtaagcgg
ttcatcgctgtgcccgagggcatccccaccgagacccggctgctggacctgggtaagaac
cgcattaagacgctcaaccaggacgagttcgccagctacccccacctggaagagctggag
ctcaatgagaacatcgtcagcgccgtcgagcccggcgccttcaacaatctctttaacctc
aggactctggggctccgcagcaaccgactgaagctcattcccttgggcgtcttcacgggc
ctcagcaacctgaccaagctggacatcagcgaaaacaagatcgtcattctcctggactac
atgttccaggacctgtataacctcaagtccctggaggtcggggacaacgatctcgtctac
atttcccaccgagccttcagcggcctcaacagcctggagcagctgacgctggagaaatgt
aacctgacctccatccccacggaggccctctcccatctgcacggcctgatcgtgctgcgg
ctgcgccacctcaacattaacgccatccgggattactccttcaagaggctgtaccggctc
aaggttctggagatctcccactggccgtatctggacaccatgacatccaactgcctctat
ggcctcaatctgacctcgctgtccatcactcactgcaacttgaccgccatcccctacgtc
tcagtgcgccacctggtctatctgcgctttctcaacctgtcctacaaccccatcctcacc
atcgaggggtccatgctccacgacttgctccggctgcaggagatccagttagtcgggggt
cagctcatgatggtggagccctacgccttccgaggactcaactacctgcgtatcctgaac
gtgtctgggaaccagctgaccacgctagaagaatccgctttccactcagtgggtaaccta
gagacgctgattctggacaacaaccccttggcgtgtgactgccgcctcctctgggtcttc
cggcgccgctggcggctcaactttaacaagcagcagcccacgtgtgccacgccagagttt
gtccagggcaaagagttcaaggacttccccgacgttctcttgcctaattatttcacctgc
cgccgtgctcggatccgggaccgcaaaccccagcaggtctttgtggacgagggccacacg
gtgcagtttgtttgccgggccgacggagacccaccccccgcgatcctttggctctcgccc
cgaaagcacctcatctctgccaagagcaacggacggctgacggtgttccccgacgggacg
ttggaggtgcgctacgcccagatccaggacaacggcacctatctgtgcatcgctgccaat
gctggcggcaacgactccatgctggctcacctgcacgtgcggagctactcgcccgactgg
ccccatcagcccaacaagaccttcgccttcatctctaacctgcccaacgagagcgacgcc
aacagcacgcgcaccaccgtgcctttcccttttgacatcaagactctcatcatcgccacc
acaatgggcttcatctccttcctgggcgtggtcctcttctgccttgtactcctgtttctc
tggagccgagggaaaggcaacacgaagcacaacattgagatcgaatatgtcccccgcaag
tcggacgctggcatcagctctgctgacgcgcctcgcaagtttaacatgaaaatgatctga

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