Phascolarctos cinereus (koala): 110200066
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Entry
110200066 CDS
T05867
Symbol
CHD5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5 isoform X1
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
pcw
Phascolarctos cinereus (koala)
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcw03036
]
110200066 (CHD5)
Chromosome and associated proteins [BR:
pcw03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
110200066 (CHD5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
PHD
DUF1087
Chromo
PHD-1st_NSD
HDA2-3
ResIII
PHDvar_NSD
HTH_Hrp3
DEAD
PHD_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
110200066
NCBI-ProteinID:
XP_020830841
UniProt:
A0A6P5JIC1
LinkDB
All DBs
Position
Unknown
AA seq
2020 aa
AA seq
DB search
MRGPLGTEEEPPQLPEEEEEEMENDEDMSGLSPYSSKGLSNTPVFWLPPEEEDGGLEGLE
EFYPEEPVCVPKKKKSKKLKENKTSKVKRRKKEGSNDELSDNEEEMEEKSDSEGSDYSPN
KKKKKKLKEKKEKKSKRKKKDEDDDDNEDGGLKEPKSSGQLMEEWGLDDVDYLFSEEDYH
TLTNYKAFSQFLRPLIAKKNPKIPMSKMMTVLGAKWREFSANNPFKGSSAAAAAAAVAAA
VETVTIAPPLTVSPPQPLQPMPIRKAKTKEGKGPGVRKKVKGSKDGKKKGKGKKMAGLKF
RFGGMANKRKKGSSSEEDDREESDFDSASINSSSMRSECSSALGKKGKRRRKKKRIEDGD
GYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPEMEKAPEGKWSCPHCEKEGIQWEP
KDEEEEDDEGGEEEEDDHMEFCRVCKDGGELLCCDTCPSSYHLHCLNPPLPEIPNGEWLC
PRCTCPPLKGKVQRILHWKWTEPPAPFITVLPPPDADPGIPPPKPLEGIPEREFFVKWAG
LSYWHCSWVKELQLELYHTVMYRNYQRKNDMDEPPPFDYGSGDEDGKSEKRKSKDPHYAK
MEERFYRYGIKPEWMMIHRILNHSFDKKGDVHYLIKWKDLPYDQCTWEIDDIDIPYYENL
KQGYWNHRELMLGEDSRPPKRLNKKGKKLKDDKLEKPPETPLVDPTVKFDKQPWYIDATG
GTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVYLYSLYKEGHSKGPYLVSAP
LSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEAQI
KFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNSYRIDYKLLLTGT
PLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVF
KNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPY
LFPVAAVEAPVLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLE
DFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVII
YDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGL
GSKSGSMTKQELDDILKFGTEELFKDDVEGMMPQGQRINVPEPVAPAPDVQASKGGGTLA
AGVKKKHGSTPPGDNKDVEDSSVIHYDDAAISKLLDRNQDATDDTELQNMNEYLSSFKVA
QYVVREEDGVEEVEREIIKQEENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQVNY
NDASQEDQGTTEWQDELSDNQSEYSIGSEDEDEDFEERPEGQSGRRQSRRQLKSDRDKPL
PPLLARVGGNIEVLGFNARQRKAFLNAIMRWGMPPQDAFNSHWLVRDLRGKSEKEFRAYV
SLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLVRKKVQEFEHVNGKYSTPD
LIPESKKSSEIVSSDPNTPVPASPAHLPPGPLGLPDKMEAQLGFLDEKEQMEQKPPKPPE
LQVPGMPSDKGEGEEKPENLESKEKAREERREENEKMDPSSHQLLKEDALPEKDKPLEKV
ELNLNHGRGDDKDFRPEDSKVEEKETVETQQNGEKEEDEEGKKDDKNEKFKFMFNIADGG
FTELHTLWQNEERAAVSSGKIYDIWHRRHDYWLLAGIVTHGYARWQDIQNDPRYVILNEP
FKSEIHKGNYLEMKNKFLARRFKLLEQALVIEEQLRRAAYLNMTQDPNHPAMALNARLAE
VECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTRLPSMLSRIPPVAAR
LQMSERSILSRLTNRAGDPTIQQGSFGSSQMYNNNFGPNFRAPGPGGIVNYSQMPLGPYV
TATPTGPPASHPDRKGADSLKDGAALGRKGKLSDVICIED
NT seq
6063 nt
NT seq
+upstream
nt +downstream
nt
atgcggggcccgctgggcacagaggaggagccgccgcagctgcccgaggaggaggaagag
gagatggagaacgacgaggacatgtcagggctttctccttactcctcgaagggcctgagt
aacacccctgtcttttggttgcctccagaagaagaggatgggggccttgaaggcctggaa
gaattttatcctgaggaaccagtgtgtgttcccaagaagaagaaatccaagaaactcaag
gagaacaagacatctaaagtaaaacggagaaagaaagagggaagcaatgatgagctgtct
gataatgaagaggagatggaagagaaatctgacagtgaggggagtgactattctcctaat
aaaaagaagaagaagaaactcaaagagaagaaagagaaaaaatccaagcggaaaaagaag
gatgaagatgatgatgataatgaagatggaggtttaaaggagcccaagtcctcaggccag
ctcatggaggagtggggcctggacgatgtggattacctgttctcagaagaggattatcat
actttgaccaactacaaggccttcagccagtttcttaggcctctcattgccaagaagaac
cccaagatccccatgtcaaagatgatgacggtgttgggggccaaatggcgagagtttagc
gccaacaacccattcaaggggagctcggcggcagcggcggcagcggcagtggctgccgcc
gtggagacagtcaccatcgccccgccactgaccgtcagtccacctcagcccctccagccc
atgcccatccgtaaagccaagaccaaggagggtaaagggcctggtgtgaggaagaaagtc
aagggctccaaggacggaaagaaaaaaggcaaagggaaaaaaatggccgggttgaagttt
cggttcggaggcatggctaacaagaggaaaaaaggctcctcaagtgaggaagacgaccgg
gaggagtcggactttgacagtgccagcattaacagctcctccatgcgttctgagtgttct
tcagccttgggcaagaagggcaagaggagaaggaagaagaagagaattgaggatggggat
ggctatgagacagaccaccaggattactgcgaggtgtgccagcaaggaggagagatcatc
ttgtgcgacacgtgtccccgagcctatcacttggtgtgccttgatccagagatggagaag
gctccggagggcaaatggagctgcccccactgtgagaaagaaggcatccagtgggaacca
aaggatgaggaggaggaggacgatgaggggggcgaggaagaagaggacgaccacatggaa
ttctgccgcgtctgcaaggatgggggagaacttctctgttgtgatacctgcccgtcgtcc
tatcacctgcattgcctgaacccgccgctgcccgagatcccaaatggtgaatggctctgc
ccgcgctgtacatgcccccccttgaaagggaaagtccagcggatcctgcactggaaatgg
acagagccgcctgcccccttcatcactgtgctgcccccgcctgatgctgacccaggcatc
cctccgcccaaacctctggaaggcattcctgagcgggagttctttgtgaagtgggctgga
ctgtcctattggcattgttcctgggtgaaagagctgcagctggagctgtatcacacggtc
atgtatcgaaactaccaaaggaagaacgacatggacgagccgccgccctttgactatggc
tctggagacgaggatggcaagagcgagaagaggaagagtaaggacccgcactatgccaag
atggaggagaggttttatcgctacgggatcaagccggagtggatgatgattcaccgaatc
ctgaaccacagctttgacaagaaaggggacgtgcattacctgatcaaatggaaggatctc
ccctacgaccagtgtacctgggagattgatgacattgatataccctactatgaaaacctg
aagcaaggttattggaaccacagagagctgatgttaggagaagattccagaccacccaag
agactgaacaagaagggaaaaaagctgaaagatgacaaactggaaaagcccccagagact
cccttagtggatcccactgtcaagttcgacaagcagccatggtacatcgatgccacagga
gggacactccacccttatcagctggagggattgaactggctgaggttctcctgggcccag
ggcacagacaccatcttggccgatgagatggggctggggaagactgtccagaccatcgtg
tacctatattccctctataaggagggtcactctaaggggccatacctggtcagtgccccc
ctgtccaccatcatcaattgggagagggaatttgagatgtgggcacctgacttttatgtg
gtcacttacactggggacaaggaaagccgatcagtaatccgggagaatgagttttccttc
gaggacaatgccatccggagtgggaagaaggttttccgcatgaaaaaagaagcacaaatc
aagttccacgtcttgctcacgtcctacgaactcattaccattgaccaggccatcctgggg
tccatcgaatgggcctgtcttgtggtagatgaggctcacaggctgaaaaataaccagtcc
aagttctttagggtgttgaatagctacaggattgactacaagctgctgctcacagggaca
cccctccagaacaacctggaagagctatttcatcttctaaatttcctgactccagaacgg
ttcaacaatctggagggcttcttggaggagtttgcggacatctccaaggaagatcagatc
aagaagctgcatgacctgctggggccccacatgctacggagactgaaggctgatgtgttt
aagaacatgccagccaagacggagctgatcgtgagggtggagctgagccagatgcagaag
aaatactacaagttcattctgaccagaaattttgaagccttgaactccaaaggcggggga
aaccaggtgtcgctacttaacatcatgatggacttgaagaaatgctgcaaccacccttat
ctctttccagtggccgccgtggaggcaccagtcttgcccaatggctcctatgatggcagc
tccttggtcaagtcttctgggaagctcatgctcctccagaagatgctgaaaaagctgcgt
gatgaagggcaccgggttttgatcttctcccagatgaccaaaatgctggatctgctagag
gactttctggagtatgagggctacaagtatgagcggattgatggtgggattacgggaggt
cttcggcaagaagccatcgacagattcaatgctcctggagcccagcagttctgtttcctc
ctctccacccgggctggtggcctgggcatcaacttggccactgctgacaccgtcattatc
tacgactcggactggaatcctcacaatgacatacaggccttcagcagagcccaccgcatt
gggcagaacaagaaagtaatgatctaccgctttgtgacgagggcctccgtggaggagcga
atcacccaggtggccaaacgcaagatgatgctgacgcacctggtggtgcggcccggcctg
ggctccaagtccgggtccatgaccaagcaggagctggacgacatcctgaagtttgggaca
gaggagctctttaaggatgatgtggaaggcatgatgcctcagggtcagcggatcaacgtg
cccgagcccgtggcgcccgcccccgatgtccaggcctccaaaggtggtggcaccttagca
gctggggtgaaaaaaaagcatggcagcaccccaccaggtgacaacaaggacgtggaggac
agcagtgtgattcattatgatgatgctgccatatccaagctgctggataggaaccaggat
gccacggatgacacagaactgcagaacatgaatgagtacctaagctccttcaaggtggct
cagtacgtggtccgggaagaagacggagtggaggaggtagagagggagatcatcaagcag
gaggagaacgtggaccccgactactgggagaagctccttcgtcatcactatgagcagcaa
caggaggacctggcccgaaacctgggcaagggcaagagaatccggaaacaggtcaattat
aatgatgcttcccaggaggaccaaggtacgacagaatggcaggatgagctttcggacaat
cagtcggagtactccatcggctccgaggatgaggatgaggattttgaagagaggccggaa
ggtcagagtgggaggagacaatcccggaggcagctaaaaagtgaccgagacaaaccctta
ccccctctgctggcaagagttggaggcaacattgaggtcttagggttcaatgcccggcag
cggaaagccttcttgaacgccatcatgcgctggggcatgcccccccaggatgccttcaac
tctcactggctagtccgggacctccgagggaaaagcgagaaggaatttagggcctacgtg
tccctcttcatgagacacttgtgtgagccaggggccgacggggcagagacctttgcggat
ggcgtccctcgggaggggctctctcgacagcatgtgctcacccggattggagttatgtca
ctagttaggaagaaggtccaggagtttgaacacgttaatgggaagtacagcacacctgac
ctgattcctgagagcaagaaatccagtgagattgtctcctcggaccccaataccccagtc
cctgccagcccagcccatcttcctcctggccctttggggctcccagacaaaatggaagcc
cagctgggcttcctggatgaaaaagagcaaatggagcagaaacctcccaaacctcctgaa
ctccaggttccagggatgccctctgacaaaggggagggggaggagaagccagaaaacctg
gagagcaaagagaaagctagagaggagaggagggaagagaatgagaagatggatccgtcc
tcgcatcagctgctgaaagaggatgctctccctgaaaaagacaagcccctggagaaggtg
gaattaaatctgaaccatggcagaggggatgacaaagattttcggccagaggactccaag
gtagaagagaaggaaacagtggaaacccagcaaaatggcgaaaaagaggaagatgaggaa
gggaagaaggatgacaagaatgagaaatttaaattcatgtttaacattgctgatgggggt
ttcacagaattgcacacactgtggcagaatgaggagcgagctgctgtctcctcggggaag
atctatgatatttggcatcggcgccatgattactggcttctggcgggtattgtgacgcat
ggctatgcccgctggcaggacatccagaatgacccacgctacgtgatcctgaatgagccc
ttcaagtctgagattcacaagggcaattacctggagatgaaaaacaaattcctggcccga
aggttcaagctgctagagcaggcgctggtgattgaggagcaacttaggagggctgcatac
ctcaacatgacccaagaccctaaccatccagccatggccttgaatgcccgtctggcagaa
gtggaatgccttgctgagagccaccagcacttgtccaaggagtccctggctgggaacaag
cctgctaatgctgtcctccataaggtactgaaccagctggaggaacttttgagtgacatg
aaggctgatgtaacccgcctgccctccatgttgtcccggatcccgcccgtggctgctcgt
ctgcagatgtctgaacgcagcatcctgagccgcctgacaaaccgtgccggagatcccacc
atccagcagggttctttcggctcctcccagatgtacaacaacaactttgggccaaacttc
cgggctcctggaccaggcgggattgtcaactacagccagatgcccctcggcccctatgtg
actgccacgcccactgggccacctgccagccaccccgacagaaaaggagctgactccctg
aaagacggtgctgctttgggacgaaaggggaaactcagcgatgtcatctgcattgaagac
taa
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