Phascolarctos cinereus (koala): 110200164
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Entry
110200164 CDS
T05867
Symbol
POLR2B
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
pcw
Phascolarctos cinereus (koala)
Pathway
pcw03020
RNA polymerase
pcw03420
Nucleotide excision repair
pcw05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
110200164 (POLR2B)
09124 Replication and repair
03420 Nucleotide excision repair
110200164 (POLR2B)
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
110200164 (POLR2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcw03021
]
110200164 (POLR2B)
03400 DNA repair and recombination proteins [BR:
pcw03400
]
110200164 (POLR2B)
Enzymes [BR:
pcw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
110200164 (POLR2B)
Transcription machinery [BR:
pcw03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
110200164 (POLR2B)
DNA repair and recombination proteins [BR:
pcw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
110200164 (POLR2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
110200164
NCBI-ProteinID:
XP_020831001
UniProt:
A0A6P5JIT5
LinkDB
All DBs
Position
Unknown
AA seq
1174 aa
AA seq
DB search
MYDADEDMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DAPPIDLQAEAQHATGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTY
SAPLYVDITKTVIKEGEEQLQTQHQKTFIGKIPIMLRSTYCLLNGLTDRDLCELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENSSRPTSTIWVSML
ARGGQGAKKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHIIYDFEDPEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQ
KFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSE
VSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKKRHIDQLKEREYNNYSWQDLVASG
VVEYIDTLEEETVMLAMTPDDLQEKGVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIV
AIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGFDQEEVFEKPTRETCQGM
RHAIYDKLDDDGLIAPGVRVSGDDVIIGKTVTLPENEDELESTNRRYTKRDCSTFLRTSE
TGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEG
ITPDIIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNVQKISNLLSDYGY
HLRGNEVLYNGFTGRKITSQIFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSR
DGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGC
RNKTQISLVRMPYACKLLFQELMSMSIAPRMMSV
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtacgacgcggacgaggatatgcaatatgatgaagatgatgatgaaatcactccagat
ttgtggcaagaagcttgctggattgttattagttcctattttgatgagaagggtttggtc
cgacaacagctggattcttttgatgagttcattcagatgtctgtgcagagaattgtggag
gatgccccacctatagatttacaagctgaagctcagcatgctactggagaagttgaagaa
ccgcctcgatatctgctgaagtttgaacagatttatctctccaagcctactcactgggaa
agagatggggctccttcacctatgatgccaaatgaagccagattgaggaatctcacgtat
tctgctcctctttatgtggatatcacgaaaacagttattaaagagggagaagaacagctt
cagacacagcatcaaaaaacttttataggaaaaattccaattatgcttcgttcaacatac
tgtctgctaaatggtttaactgaccgtgatctctgtgaattaaatgaatgccctcttgat
cctggtggctatttcattattaatggttcagaaaaggttctaattgcccaagagaaaatg
gcaacaaatacagtgtatgtgtttgccaaaaaagactccaaatatgcatatacaggagaa
tgtagatcatgtctggagaattcttcgcgaccgacaagtactatatgggttagcatgctt
gcaagaggaggacagggtgcaaagaagagcgcaattggtcagcgtattgtagctacttta
ccatacatcaagcaagaagttcccattatcattgtgtttcgagcattaggttttgtgtcc
gacagagacatcttagaacatattatttatgattttgaagatccagagatgatggaaatg
gtcaaaccttctttggatgaagcttttgtcatccaggagcagaatgttgcactcaatttt
attggctcaagaggagcaaagcctggtgttactaaggagaaaagaattaaatatgcaaaa
gaagttctacaaaaagaaatgcttcctcacgttggcgtcagtgacttttgtgaaacaaaa
aaagcctatttcctagggtatatggttcatagattacttctggctgctctgggaaggagg
gaactggatgacagagatcactatggaaacaagaggctggatctggctgggccgctgctt
gcatttttgtttagaggcatgtttaagaatttacttaaagaagtgaggatatatgcacag
aagtttattgatagaggcaaggacttcaacttggagttggcaattaaaacaaggatcata
tcagatggcttaaaatattctttagctactgggaactggggcgatcaaaagaaggctcac
caggccagagcgggagtatctcaggtgttaaaccggctgacctttgcatctactctttct
cacttgcgtcgtttgaactcgccgattggtagagatggtaaattagcaaagccaagacag
ttgcataatacgttgtggggaatggtgtgtcctgctgagactccagagggccatgcggta
ggacttgtgaagaatttagccctgatggcttatatttctgtcggatctcagccttctcca
attctggagtttttggaagaatggagtatggaaaatctagaagaaatttctccagctgct
attgctgatgcaaccaagatctttgttaatggctgctgggttggaatacataaagatcct
gaacagcttatgaataccctaagaaaattgcgacgccagatggatatcattgtctctgaa
gtttctatgatcagagatattcgagagagagagattcggatttacacagatgcaggccga
atttgcagaccacttttaattgttgaaaaacagaagctacttttgaagaagaggcacatt
gatcagttaaaagaacgtgaatataacaattacagttggcaagatcttgtggccagtgga
gtggtggaatatattgataccctggaagaagaaactgtgatgcttgcgatgactccagat
gacttacaagagaagggagttgcttattgttctacttatacccactgtgaaattcaccca
tcaatgatccttggtgtgtgtgcatctattattccttttcctgatcacaatcagtctcct
agaaacacatatcaatctgctatgggtaaacaggcgatgggtgtttatattaccaacttc
cacgttcgtatggacacattggctcacgtgctctattatccccaaaagcctcttgtgact
acacggtctatggagtatctgcgatttagagagttgccagcaggtatcaactcgattgtg
gctattgcatcatacaccggatataatcaagaagattctgttatcatgaaccgctctgct
gttgatagaggttttttcaggtcagttttttatcggtcttacaaagaacaggaatctaag
aaaggatttgaccaagaagaggtatttgaaaaaccaacacgtgaaacatgccagggtatg
aggcatgctatctatgacaagttggatgatgatggtttgatagctcctggtgtccgtgta
tcaggagatgacgttattatcggcaaaacagtaactctgcctgaaaacgaagatgaactg
gagagcacaaatagacgttacaccaagagagattgtagcacttttctcagaactagtgag
actggtattgtggatcaagtgatggtaaccttaaaccaggaaggatataaattttgcaaa
ataagggtgcgctctgtaaggatcccacagattggagacaaatttgccagtcggcatggt
cagaagggtacctgtggtatccagtacaggcaagaggatatgcctttcacctgtgagggt
attacccctgatatcatcataaaccctcatgccatcccttctcgtatgactattggtcac
ttgattgaatgtcttcaagggaaggtatcagctaataaaggtgaaattggtgatgccaca
ccatttaatgatgctgttaatgtgcagaagatttctaatctgttatctgattatggttat
catctcagaggaaatgaggtcctgtacaatggatttactggtcgaaaaatcacatctcaa
atttttattggtcccacttattaccagcgtttgaagcatatggtggatgataagattcat
tctcgtgccagagggcctattcagatccttaacagacaacccatggagggtagatctcgc
gatggtggcctgcgttttggagaaatggaacgagactgtcagattgctcatggtgcagcc
cagtttctaagggaaagattatttgaagcatcagatccatatcaagttcacgtatgcaat
ctttgtggaataatggcgatagctaacaccaggacacatacgtatgagtgcagaggctgt
cgtaataaaactcagatttctctggttcgaatgccctatgcttgtaaactccttttccag
gaattgatgtctatgagcattgcaccgcgaatgatgagtgtttag
DBGET
integrated database retrieval system
